prot_L-elsbetiae_contig1471.3422.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1471.3422.1
Unique Nameprot_L-elsbetiae_contig1471.3422.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length185
Homology
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BLAST of mRNA_L-elsbetiae_contig1471.3422.1 vs. uniprot
Match: D8LHB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB6_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 1.390e-33
Identity = 76/188 (40.43%), Postives = 110/188 (58.51%), Query Frame = 0 
Query:    2 LKVGERLTGVLLSDDTTSMFFVNPMDASVVFRH---KPPQGDSGTNGGKIPDW-GTLIHSSPRELAKVDRIRREVVEED--KKMLFRGGEEKKRGARETVLGWLPWGKTGRRQRRAREQAREHWGEVYLTMTDRGVLEGHMFGRRVLKCGGPSFFGWRKKRDDYQAWATTEGLGLKRDGAYYWGIKIQ 183
            LKVGE LTG L+S    S  F +  D ++VF     +PP+   G   G  P+   TL+ S P ++AK   IR E++ E+  ++     G+  KRGA  T+ GW+P+GK G  +RRARE A+ H GEV L +T+RG LEG + G RV +  GPS+FG+R K   Y+ W +  G+ + R+G   W I+ +
Sbjct:  142 LKVGEVLTGTLMSPTMGSRIFASREDGAIVFAKATGEPPRDADGRVTGPTPETITTLVASDPGKVAKRSAIRAELLAEELHERTAQAEGKSGKRGALATIAGWMPFGKGGFLRRRAREHAKVHMGEVNLYVTNRGHLEGSVDGTRVARKSGPSWFGYRTKDPSYELWVSHSGVEITRNGMLDWSIEAE 329
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1471.3422.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LHB6_ECTSI1.390e-3340.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1471contigL-elsbetiae_contig1471:8974..10519 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1471.3422.1mRNA_L-elsbetiae_contig1471.3422.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1471 8610..10582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1471.3422.1 ID=prot_L-elsbetiae_contig1471.3422.1|Name=mRNA_L-elsbetiae_contig1471.3422.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp
MLKVGERLTGVLLSDDTTSMFFVNPMDASVVFRHKPPQGDSGTNGGKIPD
WGTLIHSSPRELAKVDRIRREVVEEDKKMLFRGGEEKKRGARETVLGWLP
WGKTGRRQRRAREQAREHWGEVYLTMTDRGVLEGHMFGRRVLKCGGPSFF
GWRKKRDDYQAWATTEGLGLKRDGAYYWGIKIQT*
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