prot_L-elsbetiae_contig147.3413.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig147.3413.1
Unique Nameprot_L-elsbetiae_contig147.3413.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length114
Homology
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BLAST of mRNA_L-elsbetiae_contig147.3413.1 vs. uniprot
Match: A0A6H5LI96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI96_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 9.310e-15
Identity = 36/58 (62.07%), Postives = 42/58 (72.41%), Query Frame = 0 
Query:    1 MGDAVLFQTARSDGQHLGPGSYDLPSTLRTGRRPTTAPEPAMPAVPGVPHALSGARRA 58
            MGDAVLF+TAR+DG+HLGPGSYDLP TL  GRRP+T PE ++   P      S  RRA
Sbjct:   57 MGDAVLFKTARADGEHLGPGSYDLPPTLNNGRRPSTGPEASLRVKPQQTRPRSRLRRA 114
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig147.3413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LI96_9PHAE9.310e-1562.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig147contigL-elsbetiae_contig147:10579..12313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig147.3413.1mRNA_L-elsbetiae_contig147.3413.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig147 10579..12313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig147.3413.1 ID=prot_L-elsbetiae_contig147.3413.1|Name=mRNA_L-elsbetiae_contig147.3413.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=114bp
MGDAVLFQTARSDGQHLGPGSYDLPSTLRTGRRPTTAPEPAMPAVPGVPH
ALSGARRADRDGRLGGPRSTREGKGHAASVPAASSARPQDARKGKASSAR
PQDARKGKGAAGLL
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