mRNA_L-elsbetiae_contig10.34.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10.34.1 vs. uniprot
Match: A0A6B7ILH5_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7ILH5_9PHAE) HSP 1 Score: 328 bits (842), Expect = 2.370e-112 Identity = 160/178 (89.89%), Postives = 168/178 (94.38%), Query Frame = 1 Query: 1 SLLIFALVFSLPLVTFADVAGLTKCSDSSPFKKRLDASVKKLEVRVQKYEAGSPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEFMIPGMMFLYITGWIGWVGRSYLNTVGQSSNPTEKEIIIDVPLAFKIMSSGFIWPFSAWQEFTSGKFLASDSEITVSPR 534 SLLIF LVFSLPLVTFADVAGLTKCS+S+ F KRLDASVKKLE R+QKYEAGSPPALALEQQINRTKQRFDRYSNS+LLCGKDGLPHLITDGRW+HAVEFMIPGMMFLYITGWIGWVGR+YLNT+ SSNPTEKEIIIDVPLA KIMSSGFIWP SAWQEFTSG FLA DS+ITVSPR Sbjct: 7 SLLIFVLVFSLPLVTFADVAGLTKCSESTTFNKRLDASVKKLEGRIQKYEAGSPPALALEQQINRTKQRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRNYLNTISGSSNPTEKEIIIDVPLALKIMSSGFIWPVSAWQEFTSGNFLAPDSDITVSPR 184
BLAST of mRNA_L-elsbetiae_contig10.34.1 vs. uniprot
Match: A0A344PFC1_9PHAE (Photosystem I reaction center subunit III n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A344PFC1_9PHAE) HSP 1 Score: 319 bits (817), Expect = 1.570e-108 Identity = 157/178 (88.20%), Postives = 163/178 (91.57%), Query Frame = 1 Query: 1 SLLIFALVFSLPLVTFADVAGLTKCSDSSPFKKRLDASVKKLEVRVQKYEAGSPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEFMIPGMMFLYITGWIGWVGRSYLNTVGQSSNPTEKEIIIDVPLAFKIMSSGFIWPFSAWQEFTSGKFLASDSEITVSPR 534 SLLIF L SLPL +FADVAGLTKCSDSS F KRLD+SVKKLE R++KYE SPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEF+IPGMMFLYI+GWIGWVGRSYLNTV SNPTEKEIIIDVPLA KIMSSGFIWP SAWQEFTSGKFLA DSEITVSPR Sbjct: 8 SLLIFFLALSLPLASFADVAGLTKCSDSSAFTKRLDSSVKKLEGRIKKYEPNSPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEFVIPGMMFLYISGWIGWVGRSYLNTVSVFSNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGKFLAPDSEITVSPR 185
BLAST of mRNA_L-elsbetiae_contig10.34.1 vs. uniprot
Match: A0A8F0FAP0_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAP0_9PHAE) HSP 1 Score: 316 bits (809), Expect = 2.510e-107 Identity = 152/178 (85.39%), Postives = 166/178 (93.26%), Query Frame = 1 Query: 1 SLLIFALVFSLPLVTFADVAGLTKCSDSSPFKKRLDASVKKLEVRVQKYEAGSPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEFMIPGMMFLYITGWIGWVGRSYLNTVGQSSNPTEKEIIIDVPLAFKIMSSGFIWPFSAWQEFTSGKFLASDSEITVSPR 534 SLLIF + SLPL+ FADVAGLTKCS+S+ F KRL++SVKKLE+RVQKYEAGSPPALALEQQI+RTKQRFDRYSNS+LLCGK+GLPHLITDGRW+HAVEFMIPGMMFLYI+GWIGWVGR YLNTV +SNPTEKEIIIDVPLA KIMS+GFIWP SAWQEFTSG FLASDSEITVSPR Sbjct: 7 SLLIFFVTLSLPLIAFADVAGLTKCSESAAFNKRLESSVKKLELRVQKYEAGSPPALALEQQISRTKQRFDRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYISGWIGWVGRKYLNTVSNTSNPTEKEIIIDVPLALKIMSTGFIWPASAWQEFTSGNFLASDSEITVSPR 184
BLAST of mRNA_L-elsbetiae_contig10.34.1 vs. uniprot
Match: D1J7A8_ECTSI (Photosystem I reaction center subunit III n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7A8_ECTSI) HSP 1 Score: 312 bits (800), Expect = 1.850e-105 Identity = 153/178 (85.96%), Postives = 162/178 (91.01%), Query Frame = 1 Query: 1 SLLIFALVFSLPLVTFADVAGLTKCSDSSPFKKRLDASVKKLEVRVQKYEAGSPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEFMIPGMMFLYITGWIGWVGRSYLNTVGQSSNPTEKEIIIDVPLAFKIMSSGFIWPFSAWQEFTSGKFLASDSEITVSPR 534 SLLIF L SLPL +FADVAGLTKCS+S F KRL+ SVKKLE RVQKYE SPPALALEQQINRTKQRF+RYSNS+LLCGK+GLPHLITDGRW+HAVEFMIPGMMFLYITGWIGWVGRSYLNTV ++NPTEKEIIIDVPLA KIMSSGFIWP SAWQEFTSGKFLA DSEITVSPR Sbjct: 40 SLLIFFLTLSLPLASFADVAGLTKCSESVAFNKRLELSVKKLEGRVQKYEPNSPPALALEQQINRTKQRFNRYSNSELLCGKEGLPHLITDGRWDHAVEFMIPGMMFLYITGWIGWVGRSYLNTVSNTTNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGKFLAPDSEITVSPR 217
BLAST of mRNA_L-elsbetiae_contig10.34.1 vs. uniprot
Match: A0A8F0JXW8_9PHAE (Photosystem I reaction center subunit III n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0JXW8_9PHAE) HSP 1 Score: 310 bits (795), Expect = 3.390e-105 Identity = 148/178 (83.15%), Postives = 162/178 (91.01%), Query Frame = 1 Query: 1 SLLIFALVFSLPLVTFADVAGLTKCSDSSPFKKRLDASVKKLEVRVQKYEAGSPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEFMIPGMMFLYITGWIGWVGRSYLNTVGQSSNPTEKEIIIDVPLAFKIMSSGFIWPFSAWQEFTSGKFLASDSEITVSPR 534 S LIF L S+PL FADVAGLTKCS+S+PF KRL+ASVKKLE RVQKYE GSPPALALEQQINRTKQRFDRYS S+LLCGK+GLPHLITDGRW+H+VEF+IPG+MFLYI+GWIGWVGRSYLNTV ++SNPTEKEIIIDVPLA KIMSSGF+WP SAWQEFT G FLA DSEITVSPR Sbjct: 7 SFLIFFLALSIPLTAFADVAGLTKCSESAPFNKRLEASVKKLESRVQKYEVGSPPALALEQQINRTKQRFDRYSKSELLCGKEGLPHLITDGRWDHSVEFVIPGLMFLYISGWIGWVGRSYLNTVSKTSNPTEKEIIIDVPLALKIMSSGFVWPVSAWQEFTGGNFLAPDSEITVSPR 184
BLAST of mRNA_L-elsbetiae_contig10.34.1 vs. uniprot
Match: A0A0S0GAQ3_COSCS (Photosystem I reaction center subunit III n=29 Tax=Laminariales TaxID=2886 RepID=A0A0S0GAQ3_COSCS) HSP 1 Score: 309 bits (792), Expect = 1.820e-104 Identity = 148/178 (83.15%), Postives = 161/178 (90.45%), Query Frame = 1 Query: 1 SLLIFALVFSLPLVTFADVAGLTKCSDSSPFKKRLDASVKKLEVRVQKYEAGSPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEFMIPGMMFLYITGWIGWVGRSYLNTVGQSSNPTEKEIIIDVPLAFKIMSSGFIWPFSAWQEFTSGKFLASDSEITVSPR 534 S+LIF L S+PL FADVAGLTKCS+S+PF KR DASVKKLEVRV+KYE GSPPALALEQQI RTKQRF RYSNS+LLCGK+GLPHLITDGRW+HAVEF+IPGMMFLYI+GWIGW GRSYLNTVG +SNPTEKEII+DVPLA KIMSSGFIWP SAWQEFT+G FL DSEITVSPR Sbjct: 25 SVLIFFLALSIPLAAFADVAGLTKCSESAPFNKRFDASVKKLEVRVKKYEPGSPPALALEQQITRTKQRFTRYSNSELLCGKEGLPHLITDGRWDHAVEFVIPGMMFLYISGWIGWAGRSYLNTVGATSNPTEKEIILDVPLALKIMSSGFIWPVSAWQEFTTGNFLVPDSEITVSPR 202
BLAST of mRNA_L-elsbetiae_contig10.34.1 vs. uniprot
Match: A0A2R4QPX5_9PHAE (Photosystem I reaction center subunit III n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPX5_9PHAE) HSP 1 Score: 305 bits (782), Expect = 3.470e-103 Identity = 145/177 (81.92%), Postives = 160/177 (90.40%), Query Frame = 1 Query: 4 LLIFALVFSLPLVTFADVAGLTKCSDSSPFKKRLDASVKKLEVRVQKYEAGSPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEFMIPGMMFLYITGWIGWVGRSYLNTVGQSSNPTEKEIIIDVPLAFKIMSSGFIWPFSAWQEFTSGKFLASDSEITVSPR 534 LL+ + FSLP FAD+AGLTKCSDSS F RLD+SVKKLE RV+KYEAGSPPALALEQQI+RTKQRF+RYSNS+LLCGKDGLPHLITDGRW+HAVEF+IPG+MF+YI+GWIGWVGRSY+N V + NPTEKEIIIDVPLA KIMSSGFIWP SAWQEFTSG FLASDSEITVSPR Sbjct: 10 LLVILITFSLPSTIFADIAGLTKCSDSSTFNNRLDSSVKKLESRVKKYEAGSPPALALEQQISRTKQRFNRYSNSELLCGKDGLPHLITDGRWDHAVEFVIPGLMFIYISGWIGWVGRSYINNVSNTKNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGSFLASDSEITVSPR 186
BLAST of mRNA_L-elsbetiae_contig10.34.1 vs. uniprot
Match: A0A8F0F743_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F743_9PHAE) HSP 1 Score: 304 bits (779), Expect = 1.100e-102 Identity = 144/178 (80.90%), Postives = 158/178 (88.76%), Query Frame = 1 Query: 1 SLLIFALVFSLPLVTFADVAGLTKCSDSSPFKKRLDASVKKLEVRVQKYEAGSPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEFMIPGMMFLYITGWIGWVGRSYLNTVGQSSNPTEKEIIIDVPLAFKIMSSGFIWPFSAWQEFTSGKFLASDSEITVSPR 534 SLL F L F+LPL +ADVAGLTKCSDS+ F KR D SVKKLE R+QKYE GSPP LALEQQI RTK RF+RYSNS+LLCGKDGLPHLITDGRW+HAVEF+IPG+MF+YI+GWIGWVGR Y+NT+G S NPTEKEIIIDVPLA KIMSSGFIWP SAWQEFT+G FLASDSEITVSPR Sbjct: 12 SLLFFFLAFTLPLNAYADVAGLTKCSDSAAFNKRFDGSVKKLETRIQKYEPGSPPTLALEQQIERTKNRFNRYSNSELLCGKDGLPHLITDGRWDHAVEFIIPGIMFIYISGWIGWVGRKYINTIGTSKNPTEKEIIIDVPLAVKIMSSGFIWPISAWQEFTTGNFLASDSEITVSPR 189
BLAST of mRNA_L-elsbetiae_contig10.34.1 vs. uniprot
Match: A0A1I9LVT8_9PHAE (Photosystem I reaction center subunit III n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVT8_9PHAE) HSP 1 Score: 305 bits (780), Expect = 2.110e-102 Identity = 147/179 (82.12%), Postives = 162/179 (90.50%), Query Frame = 1 Query: 1 SLLIFALVFSLPLVTFADVAGLTKCSDSSPFKKRLDASVKKLEVRVQKYEAGSPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEFMIPGMMFLYITGWIGWVGRSYLNTVGQSS-NPTEKEIIIDVPLAFKIMSSGFIWPFSAWQEFTSGKFLASDSEITVSPR 534 SLLIF L SLP ++FADVAGLTKCSDSSPF KRL++SVKKLE R++KYE SPPAL L++QI TK+RFDRYSNS+LLCGKDGLPHLITDGRW+HAVEFMIPG+MFLYI+GWIGWVGRSYLNTV ++S NPTEKEIIIDVPLA KIMSSGFIWP SAWQEFTSGKFL DSEITVSPR Sbjct: 40 SLLIFFLTLSLPFISFADVAGLTKCSDSSPFNKRLESSVKKLETRIKKYEPNSPPALVLQEQIRTTKKRFDRYSNSELLCGKDGLPHLITDGRWDHAVEFMIPGIMFLYISGWIGWVGRSYLNTVSKTSLNPTEKEIIIDVPLALKIMSSGFIWPISAWQEFTSGKFLTPDSEITVSPR 218
BLAST of mRNA_L-elsbetiae_contig10.34.1 vs. uniprot
Match: A0A141BSG7_9PHAE (Photosystem I reaction center subunit III n=15 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSG7_9PHAE) HSP 1 Score: 302 bits (773), Expect = 8.130e-102 Identity = 143/178 (80.34%), Postives = 160/178 (89.89%), Query Frame = 1 Query: 1 SLLIFALVFSLPLVTFADVAGLTKCSDSSPFKKRLDASVKKLEVRVQKYEAGSPPALALEQQINRTKQRFDRYSNSQLLCGKDGLPHLITDGRWNHAVEFMIPGMMFLYITGWIGWVGRSYLNTVGQSSNPTEKEIIIDVPLAFKIMSSGFIWPFSAWQEFTSGKFLASDSEITVSPR 534 SLLI L SLPL FADVAGLTKCS+SS F RL++SV+KLE R++KYE GSPPALALEQQINRTKQRF+RYSNS+LLCGKDGLPHLITDGRW+HAVEF+IPG+MF+YI+GWIGWVGRSY+N + +SNPTEKEIIIDVPLA KIMSSGF+WP SAWQEF SG FLASDSEITVSPR Sbjct: 9 SLLIVFLTLSLPLTVFADVAGLTKCSESSAFNNRLESSVRKLESRIKKYETGSPPALALEQQINRTKQRFNRYSNSELLCGKDGLPHLITDGRWDHAVEFIIPGIMFIYISGWIGWVGRSYINNISTTSNPTEKEIIIDVPLAIKIMSSGFVWPISAWQEFASGSFLASDSEITVSPR 186 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10.34.1 >prot_L-elsbetiae_contig10.34.1 ID=prot_L-elsbetiae_contig10.34.1|Name=mRNA_L-elsbetiae_contig10.34.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=79bp MIPGMMFLYITGWIGWVGRSYLNTVGQSSNPTEKEIIIDVPLAFKIMSSGback to top mRNA from alignment at L-elsbetiae_contig10:58844..59554+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10.34.1 ID=mRNA_L-elsbetiae_contig10.34.1|Name=mRNA_L-elsbetiae_contig10.34.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=711bp|location=Sequence derived from alignment at L-elsbetiae_contig10:58844..59554+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10:58844..59554+ >mRNA_L-elsbetiae_contig10.34.1 ID=mRNA_L-elsbetiae_contig10.34.1|Name=mRNA_L-elsbetiae_contig10.34.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=474bp|location=Sequence derived from alignment at L-elsbetiae_contig10:58844..59554+ (Laminarionema elsbetiae ELsaHSoW15)back to top |