mRNA_L-elsbetiae_contig1467.3400.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1467.3400.1
Unique NamemRNA_L-elsbetiae_contig1467.3400.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1467.3400.1 vs. uniprot
Match: A0A6H5L0J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J1_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 5.160e-81
Identity = 189/375 (50.40%), Postives = 217/375 (57.87%), Query Frame = 3 
Query:  261 MGIKEDDWLGAVRFAA-----TRDAAAADNLRISGAGHNQGSFHLDKEGGSSSSASVPPHYFQFGLGLHPWSAHARSEGWLRNLTALLEKHPQALVGEIGLDKVARTPDTRRVEWDQQLEVFRVQMALAAELSRPVSVHCVKAYGKIVDFLRDADRERPPRRSSGSR------------------ARSGNXXXXXXXXXXXXXXXXXXXXGDDVSGCRGCRIEAGXXXXXXDERRGREAGPSPGVGRDLKRDSGATERIGTRRLLPQRIALHSFTGSVEVAKDLARLGKGEAGGAKVYFGFSAAVNMRGDRETKRLTDVLRVVPDSRVLIETDRQISAA-AADELLRVCGAIAEAKGVSVAEAAALANRNATQFL 1313
            MGI+EDDW GAV FA       R    A                   E G S++ S    +F+FGLGLHPW AHARS+ WLR+LTALLE+HP ALVG   LDKVARTPDTRRVEWD Q+E       LAA +SRPVSVHCVKA+GK+VD LR +  + P   +S                     A  G        XXXXX        G D      CR   G           R+ G  P  G+    +    ER   R  LP RIALHSFTGSVEVAKD+ RLG     G++V+FGFSAAVNMRGDRETKRL DVL+VVPDSR+LIETDR+  A  A +ELLRVC AIAEAKGVS  EAAALA+ NA +FL
Sbjct:    1 MGIREDDWHGAVAFAVGAEDLQRRGIIASAXXXXXXXXXXXXXXXKAEKGESTTDSS---FFKFGLGLHPWYAHARSKEWLRDLTALLEQHPHALVG---LDKVARTPDTRRVEWDDQME-------LAARMSRPVSVHCVKAHGKLVDCLRGSGLDGPATHNSXXXXXXXXXXXXXXXXXXXXXADKGRAQSGVEGXXXXXSVLAEGGIGGDF-----CRGGGGDGLIE------RKTGCPPAGGQKEGHNGLGGERKRWR--LPPRIALHSFTGSVEVAKDITRLGARRGYGSEVFFGFSAAVNMRGDRETKRLVDVLKVVPDSRILIETDRRAPAREAVEELLRVCDAIAEAKGVSAEEAAALASGNAARFL 349
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BLAST of mRNA_L-elsbetiae_contig1467.3400.1 vs. uniprot
Match: D8LRA6_ECTSI (Cut9 interacting protein Scn1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRA6_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 4.040e-54
Identity = 117/226 (51.77%), Postives = 132/226 (58.41%), Query Frame = 3 
Query:  462 AHARSEGWLRNLTALLEKHPQALVGEIGLDKVARTPDTRRVEWDQQLEVFRVQMALAAELSRPVSVHCVKAYGKIVDFLRDADRERPPRRSSGSRARSGNXXXXXXXXXXXXXXXXXXXXGDDVSGCRGCRIEAGXXXXXXDERRGREAGPSPGVGRDLKRDSGATERIGTRRLLPQRIALHSFTGSVEVAKDLARLGKGEAGGAKVYFGFSAAVNMRGDRETKRL 1139
            AHARSE WLR+LTALLE+HP ALVGEIGLDKVARTPDTRRVEWD QLEVF+ QM LAA +SRPVSVHCVKA+GK+VD+LR                                                   +E             R+ G SP  G+  K +       G R  LP RIALHSFTGSVEVAKD+ RLG     G++V+FGFSAAVNMRGDRETKRL
Sbjct:   26 AHARSEEWLRDLTALLEQHPHALVGEIGLDKVARTPDTRRVEWDDQLEVFQAQMELAARMSRPVSVHCVKAHGKLVDYLRGL-------------------------------------------------ME-------------RKTGRSPAGGQ--KEEYNGMGGEGKRWRLPPRIALHSFTGSVEVAKDITRLGARRDYGSEVFFGFSAAVNMRGDRETKRL 187
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BLAST of mRNA_L-elsbetiae_contig1467.3400.1 vs. uniprot
Match: A0A7S1XY07_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XY07_9STRA)

HSP 1 Score: 122 bits (307), Expect = 4.700e-28
Identity = 91/291 (31.27%), Postives = 123/291 (42.27%), Query Frame = 3 
Query:  441 LGLHPWSAHARSEGWLRNLTALLEKHPQALVGEIGLDKVARTPDTRRVEWDQQLEVFRVQMALAAELSRPVSVHCVKAYGKIVDFLRDADRERPPRRSSGSRARSGNXXXXXXXXXXXXXXXXXXXXGDDVSGCRGCRIEAGXXXXXXDERRGREAGPSPGVGRDLKRDSGATERIGTRRLLPQRIALHSFTGSVEVAKDLARLGKGEAGGAKVYFGFSAAVNMRGDRETKRLTDVLRVVPDSRVLIETDRQISAAAADELLRVCGAIAEAKGVSVAEAAALANRNATQFL 1313
             G+HPW AH    GW+  L   L  HP AL+GEIGLDK ARTP+TRR E++ Q EVF  Q+ALAAEL RPVSVHCV++ GK+   +                                                                    EAG +                      LP  IALHS+  S +       L        ++Y GFS A+N R + + ++L + + VVPD R+L+E+D +      + L  +C   AEAKG S+ E A     NA +F+
Sbjct:   43 FGVHPWFAHRAENGWIERLRLRLASHPAALLGEIGLDKAARTPETRRCEYEAQQEVFAAQLALAAELRRPVSVHCVRSVGKLFGMM--------------------------------------------------------------------EAGAAAAG-------------------LPPAIALHSYGSSPDWIPRYLALP------TELYVGFSYAINGR-ENQREKLLENIAVVPDDRLLLESDLECPLDIEEHLRAMCAIFAEAKGWSLEETAERTWANAERFV 239
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BLAST of mRNA_L-elsbetiae_contig1467.3400.1 vs. uniprot
Match: A0A7S1AAK2_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AAK2_NOCSC)

HSP 1 Score: 117 bits (294), Expect = 1.240e-27
Identity = 56/102 (54.90%), Postives = 73/102 (71.57%), Query Frame = 3 
Query:  393 GSSSSASVPPHYFQFGLGLHPWSAHARSEGWLRNLTALLEKHPQALVGEIGLDKVARTPDTRRVEWDQQLEVFRVQMALAAELSRPVSVHCVKAYGKIVDFL 698
            G S+  S+P      G G+HPW AHA +EGWL  L ALLE HP ALVGE+GLDK+ RT +TR+ E+  Q  VF+ Q+ LAA+L RPVSVHCV+++GK+ + L
Sbjct:    8 GHSTQLSLP------GFGVHPWYAHAVTEGWLERLRALLEHHPHALVGEVGLDKIFRTKETRKCEYQAQQVVFQAQLKLAADLCRPVSVHCVQSWGKMAEIL 103
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BLAST of mRNA_L-elsbetiae_contig1467.3400.1 vs. uniprot
Match: L8GPB7_ACACA (TatDrelated DNase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GPB7_ACACA)

HSP 1 Score: 115 bits (287), Expect = 2.420e-25
Identity = 86/272 (31.62%), Postives = 115/272 (42.28%), Query Frame = 3 
Query:  441 LGLHPWSAHARSEGWLRNLTALLEKHPQALVGEIGLDKVARTPDTRRVEWDQQLEVFRVQMALAAELSRPVSVHCVKAYGKIVDFLRDADRERPPRRSSGSRARSGNXXXXXXXXXXXXXXXXXXXXGDDVSGCRGCRIEAGXXXXXXDERRGREAGPSPGVGRDLKRDSGATERIGTRRLLPQRIALHSFTGSVEVAKDLARLGKGEAGGA--KVYFGFSAAVNMRGDRETKRLTDVLRVVPDSRVLIETDRQISAAAADELLRVCGAIAE 1250
             G+HP+ AH  +EGWL  L   L  +P+A+VGEIGLDK A TPDT R E+D Q   F  Q  LA EL RP+S HCV+A+G ++   R                                                  R +                         L R     +  GT   LP  I +HSF G+V   + L    KG  G    ++YF FS  VNMR  +      DV++ VP+ R+LIE+D+   A   ++L RVC  +AE
Sbjct:   36 FGVHPYFAHRLAEGWLEELREKLVANPRAIVGEIGLDKAAITPDTARNEYDAQTTAFTAQFDLAVELQRPISFHCVRAFGHVMTLFRQ----------------------------------------------HALRYD------------------------QLMRSGEEDKARGT---LPPAIIMHSFAGTVGGMESLLS-NKGRKGNIQERLYFSFSKIVNMRAPKTI----DVIKAVPEDRLLIESDQHSPAHGEEDLSRVCEIVAE 229
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BLAST of mRNA_L-elsbetiae_contig1467.3400.1 vs. uniprot
Match: A0A507DYG5_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DYG5_9FUNG)

HSP 1 Score: 115 bits (288), Expect = 1.200e-24
Identity = 109/352 (30.97%), Postives = 148/352 (42.05%), Query Frame = 3 
Query:  285 LGAVRFAATRDAAAADNLRISGAGHNQGSFHLDKEGGSSSSASVPPHYFQFGLGLHPWSAHA----RSEGWLRNLTALLEKHPQALVGEIGLDKVARTPDTRRV-EWDQQLEVFRVQMALAAELSRPVSVHCVKAYGKIVDFLRDADRERPPRRSSGSRARSGNXXXXXXXXXXXXXXXXXXXXGDDVSGCRGCRIEAGXXXXXXDERRGREAGPSPGVGRDLKRDSGATERIGTRRLLPQRIALHSFTGSVEVAKDLARLGKGEAGGAKVYFGFSAAVNMRGDRETKRLTDVLRVVPDSRVLIETD----RQISAAAADELLRVCGAIAEAKGVSVAEAAALANRNATQFL 1313
            LGAV    TR        R+   G  +G +    +  S     V P +     G+HPW AH      S     +L  +L  HP ALVGEIG+D VA+   T  +  +DQQL VFR Q+ALA  + RPVSVH V+A+G +VD +R+   +R  +R+                             GD                         +                    +     +P  I  HS++GS E  + L  L  G   GA+ YF FS  VN R    + + TD +R VPD R+LIE+D    +QI AA  D     C  +AEAKG ++ E A    RNA +FL
Sbjct:   34 LGAVATLRTR--------RVLMMGTREGDWDAIADAASKWPTRVVPAF-----GVHPWFAHTVPTPPSASAFTSLERILASHPGALVGEIGIDSVAKDRTTGELYPFDQQLAVFRAQLALAGRMGRPVSVHTVRAHGCLVDVMREMAGKRQKKRN----------------WKKERELDRFYTQGDS------------------------DXXXXXXXXXXXXXXXXXXXXVSRGASIPPAIMHHSYSGSTETIRALVSLPNGM--GARFYFSFSTGVNGR----SPKTTDHIRAVPDDRILIESDLHDAQQIDAAVND----ACRMVAEAKGWTMKETAERTRRNAERFL 322
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BLAST of mRNA_L-elsbetiae_contig1467.3400.1 vs. uniprot
Match: R1FLF0_EMIHU (Uncharacterized protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FLF0_EMIHU)

HSP 1 Score: 112 bits (280), Expect = 1.300e-23
Identity = 56/94 (59.57%), Postives = 66/94 (70.21%), Query Frame = 3 
Query:  438 GLGLHPWSAHARSEGWLRNLTALLEKHPQALVGEIGLDKVART---PDTRRVEWDQQLEVFRVQMALAAELSRPVSVHCVKAYGKIVDFLRDAD 710
            GLG+HPW AH  +EGW   L ALL++HP+ALVGEIGL K AR+   P  +   W QQL VFR Q+ALAAEL RP SVHCVKA+  +V  L D D
Sbjct:   80 GLGVHPWQAHEVAEGWEARLRALLQQHPRALVGEIGLCKCARSLRGPGAKARVWPQQLRVFRTQLALAAELQRPTSVHCVKAHSSLVAALDDLD 173
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BLAST of mRNA_L-elsbetiae_contig1467.3400.1 vs. uniprot
Match: A0A7S4MD39_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MD39_9EUKA)

HSP 1 Score: 104 bits (260), Expect = 2.410e-21
Identity = 86/316 (27.22%), Postives = 125/316 (39.56%), Query Frame = 3 
Query:  420 PHYFQFGLGLHPWSAHA----------------RSEGWLRNLTALLEKHPQALVGEIGLDKVARTPD---TRRVEWDQQLEVFRVQMALAAELSRPVSVHCVKAYGKIVDFLRDADRERPPRRSSGSRARSGNXXXXXXXXXXXXXXXXXXXXGDDVSGCRGCRIEAGXXXXXXDERRGREAGPSPGVGRDLKRDSGATERIGTRRLLPQRIALHSFTGSVEVAKDLARLGKGEAGGAKVYFGFSAAVNMRGDRETKRLTDVLRVVPDSRVLIETDRQISAAAADELLRVCGAIAEAKGVSVAEAAALANRNATQF 1310
            P +   G G+HPW  H                 R E W   L + LE HP + +GEIGLDK A++     TR   W  Q+  FR+Q+ LA EL++PVS HCV  YG + D  R                                                                                       +   +  LP++IALHS+ GS ++AK    LGK     +K+YFGFS A+NMR  + TK+   V++ +P  R+L ETD        +++ ++   IA+   + + EAA + NRN+  F
Sbjct:   51 PDHTLLGFGIHPWFTHEVLKHTDDEDEAKDEEEREEKWFTELRSQLESHPASFMGEIGLDKKAKSKQGQGTREEMWLGQMRAFRLQLQLAKELNKPVSAHCVGTYGLMFDLFR---------------------------------------------------------------------------------------KWSKQSQLPEKIALHSYGGSADMAKGF--LGKSVK--SKIYFGFSVAINMRSPK-TKQ---VIKSIPIDRILPETDLDSPVRMEEDIHKIYQIIADVHQLELEEAAQILNRNSRTF 271
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BLAST of mRNA_L-elsbetiae_contig1467.3400.1 vs. uniprot
Match: F2UGW5_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UGW5_SALR5)

HSP 1 Score: 104 bits (260), Expect = 1.240e-20
Identity = 93/326 (28.53%), Postives = 139/326 (42.64%), Query Frame = 3 
Query:  441 LGLHPWSAHA--------RSEG------------------------WLRNLTALLEKHPQALVGEIGLDKVARTPDTRRVEWDQQLEVFRVQMALAAELSRPVSVHCVKAYGKIVDFLRDADRERPPRRSSGSRARSGNXXXXXXXXXXXXXXXXXXXXGDDVSGCRGCRIEAGXXXXXXDERRGREAGPSPGVGRDLKRDSGATERIGTRRLLPQRIALHSFTGSVEVAKDLARLGKGEAGGAKVYFGFSAAVNMRGDRETKRLTDVLRVVPDSRVLIETDRQISAAAADELLRVCGAIAEAKGVSVAEAAALANRNATQFLGEL 1322
            +G+HPW AH          +EG                        W   + A+L +H + +VGEIGLD VA+ P++  V+   Q +VFR  + LA    RPVS+HCVKAY  ++  L   D     +++ GS  + G+                      D  G +                     G  P V            R+  R  LP RIA+HS+ GS E  K L R+ + + G  +V+FGFS+ V++R +R  +     +  VP  R+L+E+DR  ++   DEL  V   IA+ K +      A  N+NA  + G L
Sbjct:  109 VGIHPWFAHRYVAERKDPANEGDGYKALGGSKTQHSGAVVSTAPYTWEEEMAAVLTEHERVVVGEIGLDFVAKIPESGLVDRAAQQDVFRRCLCLAGHFERPVSIHCVKAYEALITIL--CDLHARGKQAPGSFTQRGH---------------------SDTGGTQS------------------SGGHDPAV----------AARMAVR--LPPRIAVHSYGGSAETVKRLLRVCERDLG-VQVFFGFSSVVSLRSERRARAN---IAAVPLDRLLVESDRADASKVDDELAAVIDLIADVKDMDKQHVIAALNQNALTWAGFL 377
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BLAST of mRNA_L-elsbetiae_contig1467.3400.1 vs. uniprot
Match: L8HCX4_ACACA (Cut9 interacting protein Scn1, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HCX4_ACACA)

HSP 1 Score: 103 bits (256), Expect = 2.470e-20
Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 3 
Query:  447 LHPWSAHARSEGWLRNLTALLEKHPQALVGEIGLDKVARTPDTRRVEWDQQLEVFRVQMALAAELSRPVSVHCVKAYGKIVDFLRDADRE 716
            +HPW AH R   WL  L ALL ++P A+VGEIGLD+ A TPDT R E   QLEVF  Q  LA  L RPVS+HCV+A+G+  + ++   +E
Sbjct:   78 VHPWYAHRRGSDWLEELEALLRRNPAAIVGEIGLDRAATTPDTGRCEHQHQLEVFEKQFRLAGRLQRPVSIHCVRAFGQFFEAVQQILKE 167
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1467.3400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0J1_9PHAE5.160e-8150.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRA6_ECTSI4.040e-5451.77Cut9 interacting protein Scn1 n=1 Tax=Ectocarpus s... [more]
A0A7S1XY07_9STRA4.700e-2831.27Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1AAK2_NOCSC1.240e-2754.90Hypothetical protein (Fragment) n=1 Tax=Noctiluca ... [more]
L8GPB7_ACACA2.420e-2531.62TatDrelated DNase, putative n=1 Tax=Acanthamoeba c... [more]
A0A507DYG5_9FUNG1.200e-2430.97Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
R1FLF0_EMIHU1.300e-2359.57Uncharacterized protein n=3 Tax=Emiliania huxleyi ... [more]
A0A7S4MD39_9EUKA2.410e-2127.22Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
F2UGW5_SALR51.240e-2028.53Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
L8HCX4_ACACA2.470e-2052.22Cut9 interacting protein Scn1, putative n=1 Tax=Ac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1467contigL-elsbetiae_contig1467:1081..6366 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score193.0
Seed ortholog evalue3e-46
Seed eggNOG ortholog2880.D8LRA6
KEGG koko:K03424
Hectar predicted targeting categoryother localisation
EggNOG free text desc.hydrolase activity, acting on ester bonds
EggNOG OGsCOG0084@1,KOG3020@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons8
Model size1791
Cds size1308
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1467.3400.1prot_L-elsbetiae_contig1467.3400.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1467 1547..6349 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815589.9774127-UTR-L-elsbetiae_contig1467:1080..15461622815589.9774127-UTR-L-elsbetiae_contig1467:1080..1546Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1467 1081..1546 -
1691682977.4060638-UTR-L-elsbetiae_contig1467:1080..15461691682977.4060638-UTR-L-elsbetiae_contig1467:1080..1546Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1467 1081..1546 -
1622815590.095719-UTR-L-elsbetiae_contig1467:6349..63661622815590.095719-UTR-L-elsbetiae_contig1467:6349..6366Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1467 6350..6366 -
1691682977.4915254-UTR-L-elsbetiae_contig1467:6349..63661691682977.4915254-UTR-L-elsbetiae_contig1467:6349..6366Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1467 6350..6366 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815589.9932828-CDS-L-elsbetiae_contig1467:1546..17281622815589.9932828-CDS-L-elsbetiae_contig1467:1546..1728Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 1547..1728 -
1691682977.4168935-CDS-L-elsbetiae_contig1467:1546..17281691682977.4168935-CDS-L-elsbetiae_contig1467:1546..1728Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 1547..1728 -
1622815590.0077407-CDS-L-elsbetiae_contig1467:2207..23021622815590.0077407-CDS-L-elsbetiae_contig1467:2207..2302Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 2208..2302 -
1691682977.4247541-CDS-L-elsbetiae_contig1467:2207..23021691682977.4247541-CDS-L-elsbetiae_contig1467:2207..2302Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 2208..2302 -
1622815590.0190518-CDS-L-elsbetiae_contig1467:3073..31151622815590.0190518-CDS-L-elsbetiae_contig1467:3073..3115Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 3074..3115 -
1691682977.4328828-CDS-L-elsbetiae_contig1467:3073..31151691682977.4328828-CDS-L-elsbetiae_contig1467:3073..3115Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 3074..3115 -
1622815590.032022-CDS-L-elsbetiae_contig1467:3979..43861622815590.032022-CDS-L-elsbetiae_contig1467:3979..4386Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 3980..4386 -
1691682977.4432442-CDS-L-elsbetiae_contig1467:3979..43861691682977.4432442-CDS-L-elsbetiae_contig1467:3979..4386Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 3980..4386 -
1622815590.0429099-CDS-L-elsbetiae_contig1467:4992..50481622815590.0429099-CDS-L-elsbetiae_contig1467:4992..5048Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 4993..5048 -
1691682977.4528496-CDS-L-elsbetiae_contig1467:4992..50481691682977.4528496-CDS-L-elsbetiae_contig1467:4992..5048Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 4993..5048 -
1622815590.053046-CDS-L-elsbetiae_contig1467:5243..53291622815590.053046-CDS-L-elsbetiae_contig1467:5243..5329Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 5244..5329 -
1691682977.4612823-CDS-L-elsbetiae_contig1467:5243..53291691682977.4612823-CDS-L-elsbetiae_contig1467:5243..5329Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 5244..5329 -
1622815590.0678954-CDS-L-elsbetiae_contig1467:5685..58021622815590.0678954-CDS-L-elsbetiae_contig1467:5685..5802Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 5686..5802 -
1691682977.4743996-CDS-L-elsbetiae_contig1467:5685..58021691682977.4743996-CDS-L-elsbetiae_contig1467:5685..5802Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 5686..5802 -
1622815590.0811455-CDS-L-elsbetiae_contig1467:6026..63491622815590.0811455-CDS-L-elsbetiae_contig1467:6026..6349Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 6027..6349 -
1691682977.4827833-CDS-L-elsbetiae_contig1467:6026..63491691682977.4827833-CDS-L-elsbetiae_contig1467:6026..6349Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1467 6027..6349 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1467.3400.1

>prot_L-elsbetiae_contig1467.3400.1 ID=prot_L-elsbetiae_contig1467.3400.1|Name=mRNA_L-elsbetiae_contig1467.3400.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=436bp
MSRFLIDTHCHVHIYLSDGTETAETACCATSKQTETCMRNISSEGSSRRE
ARDDRLATDKSDEDSGARSMGIIPPEVVHITMGIKEDDWLGAVRFAATRD
AAAADNLRISGAGHNQGSFHLDKEGGSSSSASVPPHYFQFGLGLHPWSAH
ARSEGWLRNLTALLEKHPQALVGEIGLDKVARTPDTRRVEWDQQLEVFRV
QMALAAELSRPVSVHCVKAYGKIVDFLRDADRERPPRRSSGSRARSGNGG
AENSGGEADAGGGGGGGAGDDVSGCRGCRIEAGGGDGSGDERRGREAGPS
PGVGRDLKRDSGATERIGTRRLLPQRIALHSFTGSVEVAKDLARLGKGEA
GGAKVYFGFSAAVNMRGDRETKRLTDVLRVVPDSRVLIETDRQISAAAAD
ELLRVCGAIAEAKGVSVAEAAALANRNATQFLGEL*
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mRNA from alignment at L-elsbetiae_contig1467:1081..6366-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1467.3400.1 ID=mRNA_L-elsbetiae_contig1467.3400.1|Name=mRNA_L-elsbetiae_contig1467.3400.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5286bp|location=Sequence derived from alignment at L-elsbetiae_contig1467:1081..6366- (Laminarionema elsbetiae ELsaHSoW15)
CGGCGTCCCCGGCTCTCATGAGTAGGTTCCTGATAGATACTCACTGCCAC
GTACACATTTATCTCAGTGATGGCACCGAAACTGCAGAAACCGCATGTTG
TGCTACAAGCAAACAGACCGAGACCTGTATGAGGAACATCTCCAGCGAGG
GCAGTAGCAGGAGGGAAGCACGAGATGATAGGCTCGCCACCGACAAGAGC
GACGAAGACAGTGGTGCCAGGTCGATGGGAATTATTCCACCTGAGGTTGT
TCACATCACGATGGGGATCAAGGAGGATGACTGGCTTGGGGCTGTTCGCT
TCGCCGCTACCCGTGATGCTGCTGCTGCGGATAATCTCCGGTCGGTGCTG
TTGTAGTAAAATTGTAGTCTACGAGCTGTGAAGACGGTTGTAACCCGCGC
TCAGAGTTCCATTGAGTACAAATTATATATTATCCCAGATATGTGTTTTG
CTTCGAGCTCACCACGACTGATGGGTACGAAAAAATAGCGGCAATCAATA
ATGTGATGGGTGTACAGGAACGCGGTGTGTGCAAGTTCAAACGTAGATCT
CATGTCCAACGCAGGATTTCGGGTGCGGGCCACAACCAAGGCTCGTTTCA
TCTGGATAAGGAAGGTGGCAGCAGTTCCTCTGCTTCTGTCCCCCCCCACT
ACTTTCAATTTGGACTGGGACTGCATCCTTGGTGAGGCAACACGAAAAAT
CTGTACCATTACCGTCAAGGGTAAATACGGCGGAGTACAAACATGCTGTT
GTTGTTTTTCTCCCATCATTGGCATATTTGTCGTCTGCCCCACTGGGAGA
CCCCCATCCTCCACTACGACTAGCTAGACGACCCAACCGGGGTCACACAG
GAGGGGGGGTTGGACCCTCTCCTGCGGTACAAACATGTATTTTGGTGATG
ATGGTGGTTGTTGGCTGTGGTTGTTGGTTATGCTGTCTCCTCTCCCGTTG
ATGAACGTCGTCCGGTTCCGTGCCGCTGTCCCGTCGCTGGTGTTGCCGTC
TCTGTTTGGTGTTACTGCTGCGTCGCTGGATCAAAAGGAGCGCCCACGCG
AGGTCCGAGGGGTGGCTTCGTAACCTCACGGCGCTACTCGAGAAACACCC
TCAGGCTCTGGTGGGGGAAATCGGTGAGAAGCCGCGACGCGAGAAAAGGC
AGCCACCACGTGGGATGGTTAGTGGGCTGACTGATTCGAGTCGCAGTTTC
GACATATGTATATTCATTCGTCTACAGATAGTATTGTAGTACTACTGTAG
ATGACGAACTTACCGCCGGCAAACGTTCCGGTTTTCTTTTTTCGGGCCGG
GGCGATCGATATCTGCAGGGCTCGACAAGGTGGCTCGCACCCCGGATACC
CGGCGGGTGGAGTGGGACCAACAGGTGAGAGTCGTGCACAGCGCGAAGGG
GGAGGAGAGCGCGAACCCCCTTTGCTGCGATTACGTCTGGCACAGAAACC
TATGTAGTATAGCACTCACATACTCGTTCGTGCACGCCTCTATCTGTTGC
TGCTCTTGAACTTCCTTTGAAAAGCGACCCACCGATGTCCAACCGCCCCG
GAGATGGCGAGCCGGTATCCACAAGAAAGTAGGTCTCTTTTTATGTTGGC
CGCCGAGTGCGCCCTAGATCATCGTCGGTGTCGATGGCACGAGCGCTTCT
TCTTCCCGGAGGATTCACCGGTGGTTTTGCGGGCCGTCCCCGTCGACATA
CTTACCGGGGCCTACGAGTCCTCACACAAACACCCCCCCTCGCCTCTCGC
GGGAAAACCCCGATCCGCCCACCTCCCCTTCCCCTGTATCGGGAGAGTTG
GCGGCACTTTTGCTCTCGTGCCCACTTTAACGAAATTCGGACCCCGCCCC
CCGCCTCCCGCCTCCCGCCTCCCCGCCCGGCACCGTAAAAAACGGACAAC
GACTGGGGTGCGGCTGATTGGACGGCGGGCTCGCTCCACGACGATCTCGT
GTACAACTTCGTGCACACGTACATACCTAGCTGGAGGTTTTTCGGGTGCA
GATGGCGCTGGCGGCGGAGCTCTCCCGTCCGGTCTCGGTGCACTGCGTCA
AGGCCTACGGAAAGATAGTGGACTTCCTGAGAGACGCCGATCGAGAGCGC
CCTCCTAGAAGAAGCAGCGGAAGCAGAGCCCGCAGCGGAAACGGCGGGGC
GGAGAACAGTGGCGGCGAAGCTGACGCCGGCGGCGGTGGCGGTGGCGGTG
CTGGCGACGATGTCAGCGGCTGTCGAGGGTGCCGTATTGAGGCTGGCGGT
GGCGATGGCAGCGGCGATGAGCGGCGGGGGCGTGAGGCTGGGCCATCGCC
CGGGGTCGGGCGGGACTTGAAGCGGGACAGCGGCGCGACGGAGAGGATAG
GAACACGCCGCCTTCTTCCGCAGCGTATCGCGCTGCAGTAAGTGTGCTGA
ATACCGCTGCTGCTGCTGCTGCTGCTGCTGTGTTTTTGTTGCACGTGCCT
ATACTGTTGTGTACTTCTATGAGACGACTTGTTAATTTTTGCTCAAAAGC
TGAAGCGCCCGCCGCCGAAGATTTGATTGAACCAGCGGCATTTTATTTCC
CCGAACCATCCACGTACTCTCGGCGTACTTTGCTTCTCTCGCCCGTCCTG
TCTTGTCTGGGTCGACACATACGTAGGAAGGTAAGACTTCGTCTCCCTGA
GACCCCCCGTAGCCGCCCTCCCGGGGTATTTAGGTATTTATTGACTTTTG
TTTTCATGGCCATAAAAAAAAAGCGTACCACCAAGTGCTCTGATTTCCGT
GGACATCGAGCCGGACGTTGCACGTACCGAACAAAGGCGTCTTAAAGTGC
CAGACCGAGGTCTTAACCCACGAAAATTCCGTCCAACAGGGCATCTTTCT
CTTTGAGCTACGGCGGGGGTGAACCAATAATTTGGAGTCGATATGACTGT
TGAAAGTGCAGAAAAGATATTCGCAGGGCAATAATGAATGCATTTCTTGG
GTGTTAGTGTTTTTCTTTTTTTTGTGAAGTTGGCACGCACGGTACGTTGC
CGCTGAGGTTGCTGTTGCTATCGCTGATCCTGCTTGGCCATGTATGCTTG
GCGCTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTGCCGC
TGCCGATGTGTTCTTGCGGCTTGTCCTGTGCTCGTGCCTCCCCTCCGTGT
GTCCTCACCAAACCGTGCCTCTTGTGCTTATCTATGTGCATACCCATTCA
GCTCCTTCACGGGATCGGTGGAAGTCGCCAAGGATCTGGCAAGGTGCGCG
CTTCATATTTCAAGCTTGAGACTCGCAAACTGGACCTAACTACGAATTCA
GAAAAAAGTGGGCAATACAAATGAAACAGACAAGATGCTCAAAACGGTAG
ACCGTACGCCGTGCCCACAGAAACGAAAACACTGACTGTCCGGCAACGTC
ACCTCTTTGCCGTTCACGTATATAGCACAAGGCACTCAAAGGAAGTCAAA
CACGAAGCGGCGGTGAGCCGTGCCGGCAGAAGCCCGAACAGCTGACGCCC
TTCCTCGCGGATTGCTTGTCGCGTGATGGTGGGTGTCGGTCAGAGTGTAG
TAGTAGACCGAGCCTCGAAACATAACTATCAAGGGTTTCATGTTGCGTGT
CGGCAAAGCCTCACGAACCTCACAACCAGACATATTCCAAACACCCGCCC
CACCCCCGCCCCCGCTCTGCCTTGACTTTTGAAGCGAGCTCTACATACCC
CTCGAATCTGAAATCTAGAAATTTTGATGAATAACTTGAGGGGAACGCAG
CGTGGATACGCCGGTCTTGATATCAAACCTTCAACTGAACACTTTGAGCG
GGGAACATGGTAGAGATGCGCCAGTCTTCATCGGTACCATTACTTGGTAA
TCTGTAGCCCTCCTCCTCCTCTCTGTTCTCGCGCTCGTCGTTGCGTTTCC
ATTGATCTTCCTCTCGCTTCTGCCTGCATTCTTTCTTGTCGCTCCATCTT
GAGCCTGAGCTTTGAATCCGCGCCTCCCTGCGGTCCCCGCTCGTCTGGCC
TGCGCTGTCCGCAGGCTTGGGAAGGGAGAGGCAGGCGGTGCCAAGGTCTA
CTTCGGATTTTCGGCGGCGGTGAATATGCGGGGGGACCGCGAGACGAAAC
GCCTGACCGGTGAGAGCGGGCGCTCGAAACGAGACTCGGTTTGTATTTTG
TGGGACGGAATCACGAGACGACGGCGAAGTTCACACGGTATATGTAGCCG
GCCGAGGCAGTCTTGAGAAACAGAAAATCCCGTCGAATTGTAGAAAATCG
TGAGCGCAGTTGGGGTGCTCATCACCAAAACTCAGCCCACTGCTGTCCTG
CTTTCATCGACTACCACCATGCGTGGCAAGTATATTTTCGCCACGGGCAA
CTGTTCGCCGTTTTTGCAGGCCGCCTTCCCGACCGAGTCTCAGACTCTTG
CTGTGGCCTTCCTCTCTTTGATTTGAGTGTCTACAACAGCACTTGGCGGC
CGCGGATGTCAAAAGCAGTAACTGGTACTCGGAAGTATTCTAATTATTTT
GATTACATATCTCTCTTCTTGTTCTCTCTCTCCCTTCTCTCCTATATCGT
GCCCCGCTGCTTCCTGAAACGCTCCCGTGATATCGCAGACGTTCTGAGGG
TCGTCCCAGACTCTCGGGTTCTCATCGAGACGGACAGGCAGATCTCGGCG
GCGGCCGCGGACGAGCTCTTGCGGGTGTGCGGCGCGATCGCGGAAGCCAA
GGGGGTTTCCGTCGCGGAGGCCGCGGCTCTCGCAAACAGAAACGCCACCC
AGTTTCTGGGGGAGTTGTGACAGCGACGACAAGAGAGAGGCAGGCGCACG
AACAGGGGGGGGGCTCGTCCGTCTCGAGCGGCGTCGGGTGGTTTCGACGG
CGGCTCGGCCGGGGCCCACGGCTAGCGAAACGGCTGTCGGTTACAATACC
CCATGCTCGTTCGAACGAAGCGTAACGTACATACACACGTAGGATGGGGT
GTTTTTGTGTGGAATGCGTGCGGTCAGCTGGTCTACACGACGATTGGATG
GTTCGGGACGGCCGCATGCATGTAACATTCTTCCGTAAACCCGAACGAAT
TAAAAAAATTGCATCTCCTGTAAGCAAGCTCCGTTTTCCCGAACAAAATA
TGTATGGTAGGTACCCAGTACTTGGGTTTGGCCTCCGATAACCGCTTGAA
GGGTTTTGACTCATTCCTTCAGCAATACGATGCTGCCGAAATCTCGATAA
GACGAAATGTTTCTGAGGGGCGTCAACTTGAAAACA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1467:1081..6366-

>mRNA_L-elsbetiae_contig1467.3400.1 ID=mRNA_L-elsbetiae_contig1467.3400.1|Name=mRNA_L-elsbetiae_contig1467.3400.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2616bp|location=Sequence derived from alignment at L-elsbetiae_contig1467:1081..6366- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGTAGGTTCCTGATAGATACTCACTGCCACGTACACATTTATCTCAG
TGATGGCACCGAAACTGCAGAAACCGCATGTTGTGCTACAAGCAAACAGA
CCGAGACCTGTATGAGGAACATCTCCAGCGAGGGCAGTAGCAGGAGGGAA
GCACGAGATGATAGGCTCGCCACCGACAAGAGCGACGAAGACAGTGGTGC
CAGGTCGATGGGAATTATTCCACCTGAGGTTGTTCACATCACGATGGGGA
TCAAGGAGGATGACTGGCTTGGGGCTGTTCGCTTCGCCGCTACCCGTGAT
GCTGCTGCTGCGGATAATCTCCGATGAGTAGGTTCCTGATAGATACTCAC
TGCCACGTACACATTTATCTCAGTGATGGCACCGAAACTGCAGAAACCGC
ATGTTGTGCTACAAGCAAACAGACCGAGACCTGTATGAGGAACATCTCCA
GCGAGGGCAGTAGCAGGAGGGAAGCACGAGATGATAGGCTCGCCACCGAC
AAGAGCGACGAAGACAGTGGTGCCAGGTCGATGGGAATTATTCCACCTGA
GGTTGTTCACATCACGATGGGGATCAAGGAGGATGACTGGCTTGGGGCTG
TTCGCTTCGCCGCTACCCGTGATGCTGCTGCTGCGGATAATCTCCGGATT
TCGGGTGCGGGCCACAACCAAGGCTCGTTTCATCTGGATAAGGAAGGTGG
CAGCAGTTCCTCTGCTTCTGTCCCCCCCCACTACTTTCAATTTGGACTGG
GACTGCATCCTTGGATTTCGGGTGCGGGCCACAACCAAGGCTCGTTTCAT
CTGGATAAGGAAGGTGGCAGCAGTTCCTCTGCTTCTGTCCCCCCCCACTA
CTTTCAATTTGGACTGGGACTGCATCCTTGGAGCGCCCACGCGAGGTCCG
AGGGGTGGCTTCGTAACCTCACGGCGCTACTCGAGAAACACCCTCAGGCT
CTGGTGGGGGAAATCGGAGCGCCCACGCGAGGTCCGAGGGGTGGCTTCGT
AACCTCACGGCGCTACTCGAGAAACACCCTCAGGCTCTGGTGGGGGAAAT
CGGGCTCGACAAGGTGGCTCGCACCCCGGATACCCGGCGGGTGGAGTGGG
ACCAACAGGGCTCGACAAGGTGGCTCGCACCCCGGATACCCGGCGGGTGG
AGTGGGACCAACAGCTGGAGGTTTTTCGGGTGCAGATGGCGCTGGCGGCG
GAGCTCTCCCGTCCGGTCTCGGTGCACTGCGTCAAGGCCTACGGAAAGAT
AGTGGACTTCCTGAGAGACGCCGATCGAGAGCGCCCTCCTAGAAGAAGCA
GCGGAAGCAGAGCCCGCAGCGGAAACGGCGGGGCGGAGAACAGTGGCGGC
GAAGCTGACGCCGGCGGCGGTGGCGGTGGCGGTGCTGGCGACGATGTCAG
CGGCTGTCGAGGGTGCCGTATTGAGGCTGGCGGTGGCGATGGCAGCGGCG
ATGAGCGGCGGGGGCGTGAGGCTGGGCCATCGCCCGGGGTCGGGCGGGAC
TTGAAGCGGGACAGCGGCGCGACGGAGAGGATAGGAACACGCCGCCTTCT
TCCGCAGCGTATCGCGCTGCACTGGAGGTTTTTCGGGTGCAGATGGCGCT
GGCGGCGGAGCTCTCCCGTCCGGTCTCGGTGCACTGCGTCAAGGCCTACG
GAAAGATAGTGGACTTCCTGAGAGACGCCGATCGAGAGCGCCCTCCTAGA
AGAAGCAGCGGAAGCAGAGCCCGCAGCGGAAACGGCGGGGCGGAGAACAG
TGGCGGCGAAGCTGACGCCGGCGGCGGTGGCGGTGGCGGTGCTGGCGACG
ATGTCAGCGGCTGTCGAGGGTGCCGTATTGAGGCTGGCGGTGGCGATGGC
AGCGGCGATGAGCGGCGGGGGCGTGAGGCTGGGCCATCGCCCGGGGTCGG
GCGGGACTTGAAGCGGGACAGCGGCGCGACGGAGAGGATAGGAACACGCC
GCCTTCTTCCGCAGCGTATCGCGCTGCACTCCTTCACGGGATCGGTGGAA
GTCGCCAAGGATCTGGCAAGCTCCTTCACGGGATCGGTGGAAGTCGCCAA
GGATCTGGCAAGGCTTGGGAAGGGAGAGGCAGGCGGTGCCAAGGTCTACT
TCGGATTTTCGGCGGCGGTGAATATGCGGGGGGACCGCGAGACGAAACGC
CTGACCGGCTTGGGAAGGGAGAGGCAGGCGGTGCCAAGGTCTACTTCGGA
TTTTCGGCGGCGGTGAATATGCGGGGGGACCGCGAGACGAAACGCCTGAC
CGACGTTCTGAGGGTCGTCCCAGACTCTCGGGTTCTCATCGAGACGGACA
GGCAGATCTCGGCGGCGGCCGCGGACGAGCTCTTGCGGGTGTGCGGCGCG
ATCGCGGAAGCCAAGGGGGTTTCCGTCGCGGAGGCCGCGGCTCTCGCAAA
CAGAAACGCCACCCAGTTTCTGGGGGAGTTGTGAACGTTCTGAGGGTCGT
CCCAGACTCTCGGGTTCTCATCGAGACGGACAGGCAGATCTCGGCGGCGG
CCGCGGACGAGCTCTTGCGGGTGTGCGGCGCGATCGCGGAAGCCAAGGGG
GTTTCCGTCGCGGAGGCCGCGGCTCTCGCAAACAGAAACGCCACCCAGTT
TCTGGGGGAGTTGTGA
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