prot_L-elsbetiae_contig146.3353.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig146.3353.1
Unique Nameprot_L-elsbetiae_contig146.3353.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length379
Homology
BLAST of mRNA_L-elsbetiae_contig146.3353.1 vs. uniprot
Match: D7G210_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G210_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 1.140e-24
Identity = 107/333 (32.13%), Postives = 130/333 (39.04%), Query Frame = 0
Query:    1 MRIDARRPAREDAGYWETLARMEAAFPLGRPVFCISLRRNGPFDFVSYARIMAGLPPDPPEQHHRQAGPNDNGSGDPGGQAAXXXXXXXXXXXXXDGDXXXXXXXXXXXXXXXXXGTASSSIGPGASPGQQQRHAPSTSFSDHLERAGSVSICPAAXXXXXXXXXXXQRQCATSTTSADSIGPVRIPSVETPGVHCRWEALRDDPEGLRAVVGALEARLAGYGAPVGGGXXXXXXXXXXXXXXXXXXXXXXHNNHRTAGDKNININSKKDDAAAAAALWTISVEEVTRSFLDSEKLLLRELHDYLVVLLPPADGVPTVPRDHDDRGSGVNQGN 333
            +RIDA+RP R  A Y ETL R+  AFP+GRP+FCISLR NGPFDFV Y RIMAGLP    +Q   +  PND                                            G+ SSSIG                F+      G  S  P             + +    ++  +   P R PS    GVH RW++L +D EGLRAVV AL+ RL+GY   V  G                           + GD   ++     D +             T  FLDSEK LL ELHDYL   LPP   V   P        GV Q N
Sbjct:  754 VRIDAQRPPRHGADYRETLRRVLEAFPMGRPMFCISLRSNGPFDFVPYVRIMAGLPAVADQQ---RLVPND-----------------------------------------YDRGSCSSSIG----------------FASADTDYGEDSHFPFMPVTRMDYDEEPRAR----SSKTEETWPGRAPSDGGSGVHERWQSLSNDAEGLRAVVHALKLRLSGYPTAVPLGLADDGGEVVIG----------------SGGDAEESVGRAASDPSHGKVPSC-----TTEVFLDSEKYLLGELHDYLAAFLPPTVDVLAAPH------GGVTQNN 995          
BLAST of mRNA_L-elsbetiae_contig146.3353.1 vs. uniprot
Match: A0A6H5L459_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L459_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.440e-12
Identity = 90/309 (29.13%), Postives = 115/309 (37.22%), Query Frame = 0
Query:   32 VFCISLRRNGPFDFVSYARIMAGLPPDPPEQHHRQAGPNDNGSGDPGGQAAXXXXXXXXXXXXXDGDXXXXXXXXXXXXXXXXXGTASSSIGPGASPGQ--QQRHAPSTSFS--DHLERAGSVSICPAAXXXXXXXXXXXQRQCATSTTSADSIGPVRIPSVETPGVHCRWEALRDDPEGLRAVVGALEARLAGYGA--PVGGGXXXXXXXXXXXXXXXXXXXXXXHNNHRTAGDKNININSKKDDAAAAAALWTISVEEVTRSFLDSEKLLLRELHDYLVVLLPPADGVPTVPRDHDDRGSGVNQGNQ 334
            +FCISLR NGP DFV Y RI+AGLP    EQ   +  PND                                            G+ SSS+G  ++     ++RH P    +  D+ E   + S  P                        +   P R PS    GVH RW++L  D EGLR VV AL+ RL+ Y    P+G                         +     GD +   + + +  AA+           T  FLDSEK LL ELHDYL   LPPA  V  VP        GV Q N+
Sbjct:    1 MFCISLRSNGPSDFVPYVRIIAGLPAVAGEQ---RLSPNDT-----------------------------------------DRGSCSSSVGFASTDTDHGEERHFPFMPVTRVDYDEEPRARSSKP------------------------EETWPGRAPSDGGSGVHERWQSLSTDAEGLREVVHALKLRLSRYPTADPLG----------------------LADDGGEVIGDGSGGDSEESEGRAASDDSHRKVPSCTTEVFLDSEKHLLGELHDYLAAFLPPAVDVLAVPH------GGVTQNNE 213          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig146.3353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G210_ECTSI1.140e-2432.13SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L459_9PHAE1.440e-1229.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig146contigL-elsbetiae_contig146:6587..8775 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig146.3353.1mRNA_L-elsbetiae_contig146.3353.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig146 6142..10594 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig146.3353.1 ID=prot_L-elsbetiae_contig146.3353.1|Name=mRNA_L-elsbetiae_contig146.3353.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=379bp
MRIDARRPAREDAGYWETLARMEAAFPLGRPVFCISLRRNGPFDFVSYAR
IMAGLPPDPPEQHHRQAGPNDNGSGDPGGQAAASADRDAGGGGGGDGDGG
DGDGGDGDGGDGGDGGTASSSIGPGASPGQQQRHAPSTSFSDHLERAGSV
SICPAAAAASSSSSERHQRQCATSTTSADSIGPVRIPSVETPGVHCRWEA
LRDDPEGLRAVVGALEARLAGYGAPVGGGGGGGGGGGGGGGDGLDGEGAQ
GHNNHRTAGDKNININSKKDDAAAAAALWTISVEEVTRSFLDSEKLLLRE
LHDYLVVLLPPADGVPTVPRDHDDRGSGVNQGNQQQQQQQQQQCDDPLRD
GGIVIRARLSRTRRRRLRFVFFFFFFRG*
back to top