mRNA_L-elsbetiae_contig14587.3348.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: D8LSW5_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW5_ECTSI) HSP 1 Score: 420 bits (1080), Expect = 1.280e-142 Identity = 230/276 (83.33%), Postives = 245/276 (88.77%), Query Frame = 2 Query: 2 DLPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAP---AGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEASERARG 820 DLPPVLK LTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYD DRGSIEIDGVDIS VGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSD MWA+LEAVQMK +VQSL GGLDAPV+EGGGNLSVGQRQLLCLARAVLQ+SQ+LVMDEATANIDQ+TDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPH+LL+ P +GTAAA + DATLSSMV+ETG +S++HLR LA EAW+ASE RG Sbjct: 94 DLPPVLKGLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDRDRGSIEIDGVDISKVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDAQMWASLEAVQMKTYVQSLAGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLLRDPPASSGTAAAARETXXXXXX------DATLSSMVDETGVSSAKHLRRLAQEAWKASEGKRG 363
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI) HSP 1 Score: 421 bits (1083), Expect = 1.790e-131 Identity = 227/273 (83.15%), Postives = 245/273 (89.74%), Query Frame = 2 Query: 2 DLPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPAGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEASERARG 820 DLPPVLK LTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYD DRG IEIDGVDIS VGLHDLRP+MSVVPQTPFLFSGSMRLNLDPFAKQSD MWA+LEAVQMK +VQSL GGLDAPV+EGGGNLSVGQRQLLCLARAVLQ+SQ+LVMDEATANIDQ+TDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPH+LL+ P + + AA+ + TA +A ADATLSSMV+ETG +S++HLR LA EAW AS G Sbjct: 1190 DLPPVLKGLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDRDRGGIEIDGVDISKVGLHDLRPKMSVVPQTPFLFSGSMRLNLDPFAKQSDAQMWASLEAVQMKTYVQSLAGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLLRDPPASCGSVAAARETTA---SAAADATLSSMVDETGVSSAKHLRRLAQEAWNASNGKGG 1459
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: A0A6H5JDN6_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE) HSP 1 Score: 421 bits (1082), Expect = 3.230e-131 Identity = 228/273 (83.52%), Postives = 243/273 (89.01%), Query Frame = 2 Query: 2 DLPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPAGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEASERARG 820 DLPPVLK LTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYD DRGSIEIDGVDIS VGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSD HMWA+LEAVQMK +VQSL GGLDAPV+EGGGNLSVGQRQLLCLARAVLQ+SQ+LVMDEATANIDQ+TDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPH+LL+ P A++ + ADATLSSMV+ETG AS++HLR LA EAW+ASE G Sbjct: 1210 DLPPVLKGLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDRDRGSIEIDGVDISKVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDAHMWASLEAVQMKTYVQSLAGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLLRDPP---ASSGTAXXXXXXXXXXXADATLSSMVDETGVASAKHLRRLAQEAWKASEGKEG 1479
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI) HSP 1 Score: 416 bits (1068), Expect = 1.620e-129 Identity = 225/273 (82.42%), Postives = 241/273 (88.28%), Query Frame = 2 Query: 2 DLPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPAGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEASERARG 820 DLPPVLK LTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYD +RG IEIDGVDIS VGLHDLRPRMSVVPQTPFLFSGSMRLNLDPF KQSD HMWA+LEAVQMK +VQSL GGLDAPV+EGGGNLSVGQRQLLCLARAVLQ+SQ+LVMDEATANIDQ+TDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPH+LL+ P + TAA+ + +A A ATLSSMV+ETG +S+ HLR LA AW ASE G Sbjct: 1159 DLPPVLKGLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDRERGGIEIDGVDISKVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFGKQSDAHMWASLEAVQMKTYVQSLAGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRSQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHVLLRDPPASCGTTAAACETSAA-----AYATLSSMVDETGVSSAMHLRRLAQGAWNASEGKGG 1426
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE) HSP 1 Score: 374 bits (960), Expect = 2.030e-114 Identity = 206/269 (76.58%), Postives = 223/269 (82.90%), Query Frame = 2 Query: 2 DLPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPAGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEASE 808 DLPPVLK LTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVE+D DRG IEIDGVDIS VGLHDLRP+MSVVPQTPFLFSGSMRLNLDPFAKQSD HMWA+LEAVQMK +VQSLPGGLDAPV+EGGGNLSVGQRQLLCLARAVLQ++Q+LVMDEATANIDQ+TDSLIQDVVRTSFKGKTVIMVAHRLNT+IDCDQV L + + G A A ADATLSSMV+ETG +S++HLR LA EAW AS+ Sbjct: 1109 DLPPVLKGLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEFDRDRGGIEIDGVDISRVGLHDLRPKMSVVPQTPFLFSGSMRLNLDPFAKQSDAHMWASLEAVQMKTYVQSLPGGLDAPVAEGGGNLSVGQRQLLCLARAVLQRTQILVMDEATANIDQHTDSLIQDVVRTSFKGKTVIMVAHRLNTIIDCDQVNYLQY--LYDEGFDQR--------------------SDAWAAADATLSSMVDETGISSAKHLRRLAQEAWNASK 1355
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: A0A7S3Y5Z6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5Z6_HETAK) HSP 1 Score: 262 bits (670), Expect = 1.890e-80 Identity = 142/216 (65.74%), Postives = 171/216 (79.17%), Query Frame = 2 Query: 5 LPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDR--GSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAK-QSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQ 643 LPPVLK LT +I+GG RVGVVGRTGAGKSSL+ LFRL+E D R ++ IDGV+ S +GLHDLR RMSV+PQTPFLFSG++R NLDPF K + D W+AL AV++ V++ GGL A V+EGGGN SVGQRQLLCL RA+L + +VLV+DEATAN+D TD LIQD VRT F+G TVIM+AHRL+TVIDCDQ++VL +G VVE G PH LLQ Sbjct: 114 LPPVLKGLTFTIQGGWRVGVVGRTGAGKSSLVGVLFRLLERDGARPGSALAIDGVETSGLGLHDLRLRMSVIPQTPFLFSGTVRENLDPFDKIEDDGEFWSALAAVRLDGAVKAQ-GGLGASVAEGGGNWSVGQRQLLCLGRALLARHRVLVLDEATANVDLETDGLIQDAVRTKFQGCTVIMIAHRLHTVIDCDQILVLGDGRVVEQGAPHTLLQ 328
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: A0A1B0D837_PHLPP (ABC transporter domain-containing protein n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0D837_PHLPP) HSP 1 Score: 250 bits (638), Expect = 1.360e-76 Identity = 133/265 (50.19%), Postives = 181/265 (68.30%), Query Frame = 2 Query: 2 DLPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPAGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAW 796 D VLKDL SI+ G ++G+VGRTGAGKSS+I ALFRL + G IEIDG+D T+GLHDLR ++S++PQ P LFSGS+R NLDPF ++ D +W+ALE V+++ V L GG+D +++GG N S+GQRQL+CLARA+L+ +++LV+DEATAN+D TD LIQ +RT F TV+ +AHRL+TV+D D+V+V+ G VVE G PH LLQ P G L S+V++TGPA++ L +A EA+ Sbjct: 72 DTEVVLKDLNFSIQPGEKIGIVGRTGAGKSSMIQALFRLAPIE---GRIEIDGIDTQTLGLHDLRSKISIIPQDPILFSGSLRANLDPFEERKDAEIWSALEGVELRGAVGQLAGGIDCRMADGGSNFSMGQRQLVCLARAILRDNRILVLDEATANVDPETDRLIQTTIRTRFAHCTVLTIAHRLHTVMDSDRVLVIDAGRVVEFGQPHELLQRPGGH----------------------LRSLVDQTGPATASLLSQVAEEAF 311
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: A0A6V7M5Z7_9HYME (ABC transporter domain-containing protein (Fragment) n=1 Tax=Bracon brevicornis TaxID=1563983 RepID=A0A6V7M5Z7_9HYME) HSP 1 Score: 247 bits (630), Expect = 2.720e-76 Identity = 137/269 (50.93%), Postives = 178/269 (66.17%), Query Frame = 2 Query: 8 PPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPAGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEASERA 814 PPVLKDL +KG +VG+VGRTGAGKSSLIA+LFRL E + G I +D V+ +GLHDLR ++S++PQ PFLFSG++R NLDPF D +WAALE V++K+ GL A ++EGG NLSVGQRQL+CLARA+++ +++LV+DEATAN+D TD LIQ +R F TV+ +AHRLNTV+D D+++V+ GSVVE HPH+LLQ G LSSMV+ETG E L+ +A E WE A Sbjct: 13 PPVLKDLNFEVKGKEKVGIVGRTGAGKSSLIASLFRLAELE---GEIIVDDVETGEIGLHDLRSKISIIPQEPFLFSGTLRRNLDPFDSYKDDVLWAALEDVELKEM------GLLAHINEGGSNLSVGQRQLVCLARAIVRNNRILVLDEATANVDPRTDELIQKTIRRKFADCTVLTIAHRLNTVMDSDRILVMDAGSVVEFDHPHVLLQNETGY----------------------LSSMVKETGRMMEEALKTVAKENWELRNSA 250
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: A0A7R9MGF6_9ACAR (Hypothetical protein (Fragment) n=1 Tax=Oppiella nova TaxID=334625 RepID=A0A7R9MGF6_9ACAR) HSP 1 Score: 246 bits (629), Expect = 5.670e-76 Identity = 127/210 (60.48%), Postives = 161/210 (76.67%), Query Frame = 2 Query: 14 VLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQ 643 VLK + +KGG +VGVVGRTGAGKSS+I+ALFR+ E + G I IDGVDI ++GLHDLR ++S++PQ P LF+GS+R NLDPF D +WAALE VQ+K+ V LPG LD V+EGG N SVGQRQL+CLARA+L+ ++VLV+DEATAN+D TD+LIQ +R F+ TVI +AHRLNT+ID D+V+VL G VVE G PH LL+ Sbjct: 10 VLKGINCVLKGGEKVGVVGRTGAGKSSVISALFRMNEPE---GQILIDGVDIQSIGLHDLRRQISIIPQEPVLFTGSVRKNLDPFGDHPDDELWAALEEVQLKESVVQLPGQLDGLVTEGGSNFSVGQRQLVCLARAILRDNRVLVLDEATANVDHRTDALIQRTIREKFRYCTVITIAHRLNTIIDSDKVIVLDAGEVVEFGIPHTLLE 216
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Match: A0A2S2PMX1_SCHGA (Putative multidrug resistance-associated protein lethal (Fragment) n=2 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2PMX1_SCHGA) HSP 1 Score: 247 bits (630), Expect = 3.090e-75 Identity = 131/272 (48.16%), Postives = 185/272 (68.01%), Query Frame = 2 Query: 2 DLPPVLKDLTLSIKGGSRVGVVGRTGAGKSSLIAALFRLVEYDTDRGSIEIDGVDISTVGLHDLRPRMSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLDAPVSEGGGNLSVGQRQLLCLARAVLQQSQVLVMDEATANIDQYTDSLIQDVVRTSFKGKTVIMVAHRLNTVIDCDQVVVLSEGSVVEAGHPHLLLQAPAGTAAATAASLDGTAGIATATADATLSSMVEETGPASSEHLRGLALEAWEASERAR 817 D P VLKDL + I+ ++G+VGRTGAGKSSLI ALFRL + GSI +D +DI+ +GLH+LR ++S++PQ P LFSG+MR NLDPF + D +W AL+ V++KD V+ LPGGL++ +SEGG N SVGQRQL+CLARA+++ +++LV+DEATAN+D TD+LIQ+ +R F+ TV+ +AHRLNTV+D D+V+V+ G +VE HPH LL+ D L MV++TG A++E L +A E++ + R Sbjct: 66 DSPHVLKDLNIKIESMEKIGIVGRTGAGKSSLIGALFRLA---LNEGSILVDDLDINDLGLHELRSKLSIIPQEPVLFSGTMRKNLDPFDEYPDHALWNALDEVELKDAVEDLPGGLNSKMSEGGSNFSVGQRQLVCLARAIVRNNRILVLDEATANVDPQTDALIQNTIRNKFRLCTVLTIAHRLNTVMDSDKVLVMDAGKMVEFDHPHNLLK----------------------NKDGFLYKMVDQTGKATAELLHSVAAESYRTQQLTR 312 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14587.3348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14587.3348.1 >prot_L-elsbetiae_contig14587.3348.1 ID=prot_L-elsbetiae_contig14587.3348.1|Name=mRNA_L-elsbetiae_contig14587.3348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=207bp MSVVPQTPFLFSGSMRLNLDPFAKQSDVHMWAALEAVQMKDHVQSLPGGLback to top mRNA from alignment at L-elsbetiae_contig14587:282..2923- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14587.3348.1 ID=mRNA_L-elsbetiae_contig14587.3348.1|Name=mRNA_L-elsbetiae_contig14587.3348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2642bp|location=Sequence derived from alignment at L-elsbetiae_contig14587:282..2923- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14587:282..2923- >mRNA_L-elsbetiae_contig14587.3348.1 ID=mRNA_L-elsbetiae_contig14587.3348.1|Name=mRNA_L-elsbetiae_contig14587.3348.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1242bp|location=Sequence derived from alignment at L-elsbetiae_contig14587:282..2923- (Laminarionema elsbetiae ELsaHSoW15)back to top |