mRNA_L-elsbetiae_contig1456.3335.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1456.3335.1
Unique NamemRNA_L-elsbetiae_contig1456.3335.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1456.3335.1 vs. uniprot
Match: D7FKQ9_ECTSI (Nkap_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ9_ECTSI)

HSP 1 Score: 308 bits (790), Expect = 2.580e-96
Identity = 210/401 (52.37%), Postives = 223/401 (55.61%), Query Frame = 1 
Query:  256 ETRPSRWGNAFETPATPANGANGVG-SNFGMYGPADTGRPSGGGXXXXXXXXXXXXXXXGAPRDESWVEHRLKLRAEARPPRGVWNRSPSPPKKKEQKAKNPVIVVESGKKMTKARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEEAVIASKLSDKSKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAAEVAQFKADVQGHRQQEESDEEVGPMPVPQLDELQGEGERGVNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLEDSGYVMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFRQMLTESSQEGEKPSGEGSNAA 1455
            E RPSRWGN  ET     +  + +  SN G+YGPADTGRPSGGG     XXXX      GAPRDESWVEHRLKLRA+    +    RS SP      +    V  VE                                                                         V A+ L+  +                                                   DAAE AQFKADVQGHR QEESDE+ GPMPVPQLDELQGEGERGVNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLEDSGYVMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFRQMLTES+QEGEKP+ EGSNAA
Sbjct:  102 ERRPSRWGNPVETDTVHDSNTHRIDRSNGGVYGPADTGRPSGGGRGWGGXXXXRAQGNNGAPRDESWVEHRLKLRADQEQGKPKVPRSTSP------EHTGRVAEVE-------------------------------------------------------------------------VNATGLNTITM------------------------------------------PPEEMNELDAAEAAQFKADVQGHRHQEESDEDAGPMPVPQLDELQGEGERGVNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLEDSGYVMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFRQMLTESNQEGEKPTAEGSNAA 381
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BLAST of mRNA_L-elsbetiae_contig1456.3335.1 vs. uniprot
Match: A0A6H5L7P3_9PHAE (Nkap_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7P3_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 2.270e-92
Identity = 152/160 (95.00%), Postives = 157/160 (98.12%), Query Frame = 1 
Query:  976 DAAEVAQFKADVQGHRQQEESDEEVGPMPVPQLDELQGEGERGVNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLEDSGYVMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFRQMLTESSQEGEKPSGEGSNAA 1455
            DAAE AQFKADVQGHR QEESDE+ GPMPVPQLDELQGEGERGVNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLE+SGYVMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFRQMLTES+QEGEKP+GEGS+AA
Sbjct:   70 DAAEAAQFKADVQGHRHQEESDEDAGPMPVPQLDELQGEGERGVNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLEESGYVMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFRQMLTESNQEGEKPTGEGSSAA 229
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BLAST of mRNA_L-elsbetiae_contig1456.3335.1 vs. uniprot
Match: A0A6U3WZE5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3WZE5_9STRA)

HSP 1 Score: 191 bits (485), Expect = 5.430e-52
Identity = 97/144 (67.36%), Postives = 120/144 (83.33%), Query Frame = 1 
Query:  976 DAAEVAQFKADVQGHRQQEESDEEVGPMPVPQLDELQGEGERGVNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLEDSGYVMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFRQMLTE 1407
            DA E  +F++DVQGH +Q+  DE  GP P+PQ ++  G  E+ VNYGGALLPGEGAAIAQ+VQK +RIPRRGEVGW G+EIE LE +GYVMSGSRHARMNA+R+RKENQV++AEE+RALALI FEEK Q+E +I+ +FR MLT+
Sbjct:  171 DAEEAGRFRSDVQGHHKQDSGDESDGPDPLPQAEQT-GLVEKNVNYGGALLPGEGAAIAQYVQKNMRIPRRGEVGWTGEEIEVLETTGYVMSGSRHARMNAIRIRKENQVYSAEEKRALALIQFEEKTQQEAKIMNDFRDMLTD 313
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BLAST of mRNA_L-elsbetiae_contig1456.3335.1 vs. uniprot
Match: G4YWQ5_PHYSP (Nkap_C domain-containing protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=G4YWQ5_PHYSP)

HSP 1 Score: 183 bits (464), Expect = 3.780e-51
Identity = 95/141 (67.38%), Postives = 113/141 (80.14%), Query Frame = 1 
Query:  985 EVAQFKADVQGHRQQEESDEEVGPMPVPQLDELQGEGERGVNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLEDSGYVMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFRQMLTE 1407
            E  +FK  VQG R  ++SDEE+GP P+P  +E        +NYG ALLPGEGAAIAQFVQK +RIPRRGEVGW G+EIE LE+ GYVMSGSRH RMNAVR+RKENQV+ AEE+RALALI FEEKQQ+EN I+ +F++MLTE
Sbjct:   11 EAVKFKEAVQGARHADDSDEEIGPKPLPAAEET---AASSLNYGKALLPGEGAAIAQFVQKNMRIPRRGEVGWNGEEIENLENLGYVMSGSRHKRMNAVRIRKENQVYTAEEKRALALINFEEKQQRENAIMNDFKEMLTE 148
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BLAST of mRNA_L-elsbetiae_contig1456.3335.1 vs. uniprot
Match: A0A7S3XSU5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSU5_HETAK)

HSP 1 Score: 183 bits (464), Expect = 3.650e-50
Identity = 95/143 (66.43%), Postives = 116/143 (81.12%), Query Frame = 1 
Query:  985 EVAQFKADVQGHRQQ--EESDEEVGPMPVPQLDELQGEGERG-VNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLEDSGYVMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFRQMLT 1404
            E  QFKA VQG ++   +E D E GPMP+P+ +E+   G +G VNYGGALLPGEG AIAQFVQK +RIPRRGE+GW+  E+E LE  GYVMSGSRH RMNA+R+RKENQV++AEE+RALALI FEEKQQKEN +L +FR+ML+
Sbjct:   74 EAEQFKAQVQGRKKVVLDEDDLEAGPMPMPEPEEVNKSGGKGGVNYGGALLPGEGQAIAQFVQKNMRIPRRGEIGWSANEVETLETMGYVMSGSRHKRMNAIRIRKENQVYSAEEKRALALITFEEKQQKENTLLADFREMLS 216
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BLAST of mRNA_L-elsbetiae_contig1456.3335.1 vs. uniprot
Match: A0A8K1FKR3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKR3_PYTOL)

HSP 1 Score: 178 bits (452), Expect = 4.130e-49
Identity = 93/142 (65.49%), Postives = 111/142 (78.17%), Query Frame = 1 
Query:  982 AEVAQFKADVQGHRQQEESDEEVGPMPVPQLDELQGEGERGVNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLEDSGYVMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFRQMLTE 1407
            +E  +FK+ VQ  R +EE DE++GP P+ + +E        +NYG ALLPGEGAAIAQ+VQK +RIPRRGEVGW GQ+IE LE  GYVMSGSRH RMNAVR+RKENQV+ AEE+RALALI FEEKQQ+EN I+  FR MLTE
Sbjct:   22 SEAEKFKSAVQRGRTEEEEDEDIGPKPLVETEEA---ANASLNYGKALLPGEGAAIAQYVQKNMRIPRRGEVGWNGQQIENLESLGYVMSGSRHTRMNAVRIRKENQVYTAEEKRALALINFEEKQQRENRIMSEFRDMLTE 160
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BLAST of mRNA_L-elsbetiae_contig1456.3335.1 vs. uniprot
Match: F0YMV5_AURAN (Nkap_C domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMV5_AURAN)

HSP 1 Score: 176 bits (447), Expect = 2.710e-48
Identity = 87/121 (71.90%), Postives = 104/121 (85.95%), Query Frame = 1 
Query: 1039 DEEVGPMPVPQLDELQGEGERGVNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLEDSGYVMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFRQML 1401
            +E+ GP P+P  D L+G G   V+YGGAL PGEGAAIAQ+VQK +RIPRRGEVGW G+EIE+LE  GYVMSGSRHARMNAVR+RKENQV++AEE+RALALI FEEKQQ+EN+++G FR ML
Sbjct:   58 EEDYGPAPLPDADALEGLGGGAVDYGGALRPGEGAAIAQYVQKNMRIPRRGEVGWQGEEIERLESVGYVMSGSRHARMNAVRIRKENQVYSAEEKRALALITFEEKQQQENKVMGEFRAML 178
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BLAST of mRNA_L-elsbetiae_contig1456.3335.1 vs. uniprot
Match: A0A6A3MSH8_9STRA (Nkap_C domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MSH8_9STRA)

HSP 1 Score: 181 bits (459), Expect = 3.890e-48
Identity = 94/141 (66.67%), Postives = 112/141 (79.43%), Query Frame = 1 
Query:  985 EVAQFKADVQGHRQQEESDEEVGPMPVPQLDELQGEGERGVNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLEDSGYVMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFRQMLTE 1407
            E  +FK  VQG R   +SDEE+GP P+P  +E        +NYG ALLPGEGAAIAQFVQK +RIPRRGEVGW G+EI+ LE+ GYVMSGSRH RMNAVR+RKENQV+ AEE+RALALI FEEKQQ+EN I+ +F++MLTE
Sbjct:  192 EAVKFKEAVQGTRHANDSDEEIGPKPLPAAEET---AASSLNYGKALLPGEGAAIAQFVQKNMRIPRRGEVGWNGEEIDNLENLGYVMSGSRHKRMNAVRIRKENQVYTAEEKRALALINFEEKQQRENAIMNDFKEMLTE 329
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BLAST of mRNA_L-elsbetiae_contig1456.3335.1 vs. uniprot
Match: W2H339_PHYPR (Nkap_C domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2H339_PHYPR)

HSP 1 Score: 182 bits (461), Expect = 1.580e-47
Identity = 95/140 (67.86%), Postives = 112/140 (80.00%), Query Frame = 1 
Query:  985 EVAQFKADVQGHRQQEESDEEVGPMPVPQLDELQGEGERGVNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLEDSGYVMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFRQMLT 1404
            E A+FK  VQG  ++EE DEE+GP P+   DE        +NYG ALLPGEGAAIAQFVQK +RIPRRGEVGW G+EIE LE+ GYVMSGSRH RMNAVR+RKENQV+ AEE+RALALI FEEKQQ+EN I+ +F++MLT
Sbjct:  277 EAAKFKEAVQGSHKEEEDDEEIGPKPLVAADETSAASS--MNYGKALLPGEGAAIAQFVQKNMRIPRRGEVGWNGEEIENLENLGYVMSGSRHKRMNAVRIRKENQVYTAEEKRALALINFEEKQQRENAIMNDFKEMLT 414
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BLAST of mRNA_L-elsbetiae_contig1456.3335.1 vs. uniprot
Match: D0N2W4_PHYIT (Nkap_C domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N2W4_PHYIT)

HSP 1 Score: 179 bits (455), Expect = 1.730e-47
Identity = 93/140 (66.43%), Postives = 113/140 (80.71%), Query Frame = 1 
Query:  985 EVAQFKADVQGHRQQEESDEEVGPMPVPQLDELQGEGERGVNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLEDSGYVMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFRQMLT 1404
            E A+FK  VQG R+ E+ DEE+GP P+   D+ +      +NYG ALLPGEGAAIAQFVQK +RIPRRGEVGW G+EIE LE+ GYVMSG+RH RMNAVR+RKENQV+ AEE+RALALI FEEKQQ+EN I+ +F++MLT
Sbjct:  197 ETAKFKEAVQGSRKDEDDDEEIGPKPLVSADD-ETSAASSMNYGKALLPGEGAAIAQFVQKNMRIPRRGEVGWHGEEIENLENLGYVMSGNRHKRMNAVRIRKENQVYTAEEKRALALINFEEKQQRENAIMNDFKEMLT 335
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1456.3335.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKQ9_ECTSI2.580e-9652.37Nkap_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5L7P3_9PHAE2.270e-9295.00Nkap_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6U3WZE5_9STRA5.430e-5267.36Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
G4YWQ5_PHYSP3.780e-5167.38Nkap_C domain-containing protein n=2 Tax=Peronospo... [more]
A0A7S3XSU5_HETAK3.650e-5066.43Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8K1FKR3_PYTOL4.130e-4965.49Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0YMV5_AURAN2.710e-4871.90Nkap_C domain-containing protein n=1 Tax=Aureococc... [more]
A0A6A3MSH8_9STRA3.890e-4866.67Nkap_C domain-containing protein n=3 Tax=Phytophth... [more]
W2H339_PHYPR1.580e-4767.86Nkap_C domain-containing protein n=8 Tax=Phytophth... [more]
D0N2W4_PHYIT1.730e-4766.43Nkap_C domain-containing protein n=2 Tax=Phytophth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1456contigL-elsbetiae_contig1456:14991..18206 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score296.2
Seed ortholog evalue2.1e-77
Seed eggNOG ortholog2880.D7FKQ9
Preferred nameNKAP
KEGG koko:K22377
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0000375,GO:0000377,GO:0000398,GO:0001775,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008283,GO:0008380,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0017069,GO:0019219,GO:0019222,GO:0019827,GO:0019843,GO:0022407,GO:0022409,GO:0030097,GO:0030098,GO:0030099,GO:0030154,GO:0030155,GO:0030217,GO:0030515,GO:0030851,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031490,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0033077,GO:0034641,GO:0042110,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045321,GO:0045580,GO:0045582,GO:0045595,GO:0045597,GO:0045619,GO:0045621,GO:0045785,GO:0045892,GO:0045934,GO:0046483,GO:0046634,GO:0046635,GO:0046637,GO:0046638,GO:0046649,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0051094,GO:0051171,GO:0051172,GO:0051239,GO:0051240,GO:0051249,GO:0051251,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0070013,GO:0071425,GO:0071704,GO:0072089,GO:0080090,GO:0090304,GO:0097159,GO:0098727,GO:1901360,GO:1901363,GO:1902105,GO:1902107,GO:1902679,GO:1903037,GO:1903039,GO:1903506,GO:1903507,GO:1903706,GO:1903708,GO:2000026,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.Notch signaling pathway
EggNOG OGsKOG2812@1,KOG2812@2759
EC2.3.2.27
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04121
Exons5
Model size1807
Cds size1116
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815584.7015173-UTR-L-elsbetiae_contig1456:14990..153321622815584.7015173-UTR-L-elsbetiae_contig1456:14990..15332Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1456 14991..15332 +
1691682974.384793-UTR-L-elsbetiae_contig1456:14990..153321691682974.384793-UTR-L-elsbetiae_contig1456:14990..15332Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1456 14991..15332 +
1622815584.7723-UTR-L-elsbetiae_contig1456:17857..182061622815584.7723-UTR-L-elsbetiae_contig1456:17857..18206Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1456 17858..18206 +
1691682974.446572-UTR-L-elsbetiae_contig1456:17857..182061691682974.446572-UTR-L-elsbetiae_contig1456:17857..18206Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1456 17858..18206 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815584.714911-CDS-L-elsbetiae_contig1456:15332..158421622815584.714911-CDS-L-elsbetiae_contig1456:15332..15842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 15333..15842 +
1691682974.395738-CDS-L-elsbetiae_contig1456:15332..158421691682974.395738-CDS-L-elsbetiae_contig1456:15332..15842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 15333..15842 +
1622815584.725164-CDS-L-elsbetiae_contig1456:16183..163631622815584.725164-CDS-L-elsbetiae_contig1456:16183..16363Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 16184..16363 +
1691682974.4080904-CDS-L-elsbetiae_contig1456:16183..163631691682974.4080904-CDS-L-elsbetiae_contig1456:16183..16363Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 16184..16363 +
1622815584.7351882-CDS-L-elsbetiae_contig1456:16682..168881622815584.7351882-CDS-L-elsbetiae_contig1456:16682..16888Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 16683..16888 +
1691682974.4189932-CDS-L-elsbetiae_contig1456:16682..168881691682974.4189932-CDS-L-elsbetiae_contig1456:16682..16888Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 16683..16888 +
1622815584.7465725-CDS-L-elsbetiae_contig1456:17360..175291622815584.7465725-CDS-L-elsbetiae_contig1456:17360..17529Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 17361..17529 +
1691682974.4281955-CDS-L-elsbetiae_contig1456:17360..175291691682974.4281955-CDS-L-elsbetiae_contig1456:17360..17529Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 17361..17529 +
1622815584.7599037-CDS-L-elsbetiae_contig1456:17806..178571622815584.7599037-CDS-L-elsbetiae_contig1456:17806..17857Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 17807..17857 +
1691682974.4375207-CDS-L-elsbetiae_contig1456:17806..178571691682974.4375207-CDS-L-elsbetiae_contig1456:17806..17857Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 17807..17857 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1456.3335.1prot_L-elsbetiae_contig1456.3335.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1456 15333..17857 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1456.3335.1

>prot_L-elsbetiae_contig1456.3335.1 ID=prot_L-elsbetiae_contig1456.3335.1|Name=mRNA_L-elsbetiae_contig1456.3335.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=372bp
MYGPADTGRPSGGGGRGWGGGGGGRGSGNGAPRDESWVEHRLKLRAEARP
PRGVWNRSPSPPKKKEQKAKNPVIVVESGKKMTKARGRGKQEERVGTNSR
NRDSKRRRRRRTPSPSSSDSSSSSSSSSSSSSSSSSSSSSSSSSSSDEEA
VIASKLSDKSKRRPSSPSQTEQDKVKVPRSDAPESPESQPAEVKVNGHEK
IPMPPEEMDEMDAAEVAQFKADVQGHRQQEESDEEVGPMPVPQLDELQGE
GERGVNYGGALLPGEGAAIAQFVQKGLRIPRRGEVGWAGQEIEKLEDSGY
VMSGSRHARMNAVRLRKENQVFNAEERRALALIMFEEKQQKENEILGNFR
QMLTESSQEGEKPSGEGSNAA*
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mRNA from alignment at L-elsbetiae_contig1456:14991..18206+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1456.3335.1 ID=mRNA_L-elsbetiae_contig1456.3335.1|Name=mRNA_L-elsbetiae_contig1456.3335.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3216bp|location=Sequence derived from alignment at L-elsbetiae_contig1456:14991..18206+ (Laminarionema elsbetiae ELsaHSoW15)
AGAGAAAGAAGTAGCGAACGGCGACGCCGATCTCGTTCCCCAGGACACAG
CAGCCGCGGCAGAGGCGACCGCTATGAAAGCCGGGGCGCAAGCCGCGACA
GAGGTTCTCGACGATCGCGTGACAGGAGTCCTCACCGAGAGGAAGATTAC
GAGAGGAGGGGATCGAGACGTGATGAAGGAGGGAGAGAAAGAGAGATAAA
TGGCGGGCGAGATGAGCGCAGGAGAGATCGAGACGCATCCGATATCCACA
AGACTGAAACAAGGCCTTCGCGTTGGGGCAATGCTTTCGAGACACCGGCC
ACTCCTGCCAACGGTGCCAACGGAGTCGGTAGTAACTTTGGGATGTACGG
GCCTGCTGACACAGGTCGCCCGAGCGGGGGTGGGGGTCGAGGGTGGGGTG
GGGGCGGCGGAGGAAGAGGTTCGGGGAACGGTGCACCACGGGACGAGTCC
TGGGTGGAGCACCGCCTCAAACTTCGGGCGGAGGCGAGGCCGCCTCGAGG
TGTGTGGAACAGGTCACCTTCTCCTCCTAAGAAGAAAGAGCAGAAGGCGA
AAAATCCCGTGATAGTTGTTGAATCGGGCAAAAAAATGACCAAGGCTCGA
GGAAGGGGCAAACAGGAGGAGCGGGTTGGAACTAACTCCCGAAACAGAGA
CTCCAAGCGGAGGAGGCGTCGCCGAACCCCTTCTCCATCCAGCAGTGACA
GCAGCAGTAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGATGAAGAGGCGGTGATCGC
TAGCAAGCTATCAGACAAGAGCAAAAGGCGACCTTCGTCTCCCAGCCAAA
CGGTGAGATGCTCCGCACAGCACGCACGTCACGTCTCTTCTCTTGTCGAC
CTGCGACACTTTTCGGCGATCTTGCCTCGCATGTACCTTGCACGTCCAAA
TTGATGATCAGCATGCCTGCGCACCCACGTAGATATATGGAGTAAAAAAT
CGTCTGAGCAGCCACAACATTGCCCTGTGAATGGGTTGACATGTCCCATT
CCAATCCCCGGTATTGCATGGAAACACGGTGGCGAGAGAGGGCCGTGGGT
GTACTTACATGTGTTGTAGCTGGGTTGCATTTTGTCGATCTCCCCAGAGA
ATGATTTTTTGATTTGAATCCCCGGCGTCACATTGTTTAACAGGAGCAAG
ACAAGGTCAAGGTGCCGAGGTCAGATGCTCCCGAATCGCCGGAAAGTCAA
CCTGCTGAGGTCAAGGTCAACGGGCATGAAAAGATTCCCATGCCACCAGA
GGAGATGGATGAGATGGATGCGGCAGAGGTGGCACAGTTTAAGGCTGATG
TACAGGGGCATCGCCAACAGGAGGTACTCGCATACCCTGCACTCAAAAAG
TCTGCGGTCTGAACTTTTTCGGTCAACGCAACTAGTTCTGGAAGCGTTTG
CTCGTCACAACGCGGCCACGTTAATAGAATGTCCACAAGAAAACATTTTC
TAAGCGTACACATACGCCGGCTCTCTACACAATGAAAGTAATGGTGCAAG
TTTGCATTAGTGGTGACTACGTGGTAGCTCTGTACACAGAAACTCTCACA
CCACGGTAGCTTGGGGGATAACCCCTGGCGTTTTTTCGTGTGTGCTTTGA
ACGATACATTAATTTCTGCTGTGTCGCGGGCAACGTTCATAGGAAAGCGA
CGAGGAGGTGGGTCCGATGCCTGTCCCTCAGCTGGACGAGTTGCAGGGGG
AAGGCGAAAGGGGTGTCAACTACGGTGGAGCACTTCTACCAGGAGAGGGT
GCGGCTATTGCCCAGTTCGTTCAGAAAGGTCTGCGTATTCCTCGCCGTGG
TGAAGTGGGATGGGCTGGTCAAGAGATCGAAAAGCTGGAAGATTCTGGGT
AAGTCGCATCTTGTTGACGAATGCCCATGTCAAGAGGTTAACCGCGATTA
CTTTTTTTTGTATGTCTTTCTGTGTTCATGATTGGTCAAGAAGACCATGT
AGTAGGCGAGTTTACTCTTCCACATTTTTGCAAGAAGGGTTTAGATCGTT
CGCACAAACAAGGCCGTCGTGATTTGACGGGTACCACACCTTTTTCTCAC
CCTTTCCTCGCCTTATGTAAATATTAGAAGTATATTGCAATCATTTTTGC
AATACCCAAGACACCTCTATTCCTCATCGTCTCCACACGCTGGATTGTGG
GGCACCCGTGAAGTGTGTTTCATCCTTGGCTTTCGCTAGAATACCACCCG
ATTGTTCACACCAAACGGACGTTTCAGTGAGGCCTGCGTTTTAAGGTATG
TCTTGACCTGCCCTTGGTTCTTACCACGTGTCTGCCTGTGATCGACCCCC
TTTTTCCCTGCATGCCCAAGGTACGTGATGAGTGGTAGCCGCCACGCCCG
CATGAACGCTGTTCGTCTGCGGAAGGAGAACCAGGTTTTCAATGCTGAAG
AGCGGCGAGCTCTAGCGCTGATCATGTTCGAAGAAAAACAGCAAAAAGAA
AACGAAATCTTGGGCAACTTCAGGCAAATGCTGACCGAGGTGAGTCTGAA
GCAGTAGATCGATCCTACATAAGTGTAAGCGGGACTTGGTTCGCCTCAGC
GAGGGCGGCAGCCATCGATTTCTAGGTTTGTAGCGGTCTATTTTGTAACC
GCCGATAGTCGGGGTGGCGGTCCCCGGTTGTCTGTTGGCTGCCTCTTTCC
GCGGTAAGCATCTCTCATCTAAAGGCCATTATGGACTCCAACCGTGTGTA
TTCATAGTCGCTCACAGCAGTTCCTGAATCGCTTATCTCGTCTCGTTCCC
TTTCTTTACTAAGCAGTCAAGTCAAGAAGGGGAAAAACCGAGTGGCGAAG
GATCAAATGCAGCATGACCGGGTCGGAGCTACGCCTGGAGAGCACTCGCA
CAAGAAGCGCCTGTATTTTGGAATGGACCTGCTGGCGACAAGAAGATATT
TTTTTGTTGCTGTACTGTTTGACTGGAAATACACGTTGACTAGTGTAGAT
TCTCAGTTGTATCCAATTTGCAATCCTTTTGGGGTGCATGTGCATGAGAG
GGCGCGCACGTTGCCACGGGAGAAGTACGCAGAATGGGCCAGAATCGTGA
CGGAAAGCTTGGGTCAGTTATGCTTTCTACCCACGGCAATACGAGCGCTC
CACGCTAGCGTTAAATATCTCCCGCCCGTGTGTGCTACCATGTGCGGAGC
TGCCTGCGGACCGAAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1456:14991..18206+

>mRNA_L-elsbetiae_contig1456.3335.1 ID=mRNA_L-elsbetiae_contig1456.3335.1|Name=mRNA_L-elsbetiae_contig1456.3335.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2232bp|location=Sequence derived from alignment at L-elsbetiae_contig1456:14991..18206+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTACGGGCCTGCTGACACAGGTCGCCCGAGCGGGGGTGGGGGTCGAGG
GTGGGGTGGGGGCGGCGGAGGAAGAGGTTCGGGGAACGGTGCACCACGGG
ACGAGTCCTGGGTGGAGCACCGCCTCAAACTTCGGGCGGAGGCGAGGCCG
CCTCGAGGTGTGTGGAACAGGTCACCTTCTCCTCCTAAGAAGAAAGAGCA
GAAGGCGAAAAATCCCGTGATAGTTGTTGAATCGGGCAAAAAAATGACCA
AGGCTCGAGGAAGGGGCAAACAGGAGGAGCGGGTTGGAACTAACTCCCGA
AACAGAGACTCCAAGCGGAGGAGGCGTCGCCGAACCCCTTCTCCATCCAG
CAGTGACAGCAGCAGTAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGATGAAGAGGCG
GTGATCGCTAGCAAGCTATCAGACAAGAGCAAAAGGCGACCTTCGTCTCC
CAGCCAAACGATGTACGGGCCTGCTGACACAGGTCGCCCGAGCGGGGGTG
GGGGTCGAGGGTGGGGTGGGGGCGGCGGAGGAAGAGGTTCGGGGAACGGT
GCACCACGGGACGAGTCCTGGGTGGAGCACCGCCTCAAACTTCGGGCGGA
GGCGAGGCCGCCTCGAGGTGTGTGGAACAGGTCACCTTCTCCTCCTAAGA
AGAAAGAGCAGAAGGCGAAAAATCCCGTGATAGTTGTTGAATCGGGCAAA
AAAATGACCAAGGCTCGAGGAAGGGGCAAACAGGAGGAGCGGGTTGGAAC
TAACTCCCGAAACAGAGACTCCAAGCGGAGGAGGCGTCGCCGAACCCCTT
CTCCATCCAGCAGTGACAGCAGCAGTAGCAGTAGCAGCAGCAGCAGTAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGA
TGAAGAGGCGGTGATCGCTAGCAAGCTATCAGACAAGAGCAAAAGGCGAC
CTTCGTCTCCCAGCCAAACGGAGCAAGACAAGGTCAAGGTGCCGAGGTCA
GATGCTCCCGAATCGCCGGAAAGTCAACCTGCTGAGGTCAAGGTCAACGG
GCATGAAAAGATTCCCATGCCACCAGAGGAGATGGATGAGATGGATGCGG
CAGAGGTGGCACAGTTTAAGGCTGATGTACAGGGGCATCGCCAACAGGAG
GAGCAAGACAAGGTCAAGGTGCCGAGGTCAGATGCTCCCGAATCGCCGGA
AAGTCAACCTGCTGAGGTCAAGGTCAACGGGCATGAAAAGATTCCCATGC
CACCAGAGGAGATGGATGAGATGGATGCGGCAGAGGTGGCACAGTTTAAG
GCTGATGTACAGGGGCATCGCCAACAGGAGGAAAGCGACGAGGAGGTGGG
TCCGATGCCTGTCCCTCAGCTGGACGAGTTGCAGGGGGAAGGCGAAAGGG
GTGTCAACTACGGTGGAGCACTTCTACCAGGAGAGGGTGCGGCTATTGCC
CAGTTCGTTCAGAAAGGTCTGCGTATTCCTCGCCGTGGTGAAGTGGGATG
GGCTGGTCAAGAGATCGAAAAGCTGGAAGATTCTGGGAAAGCGACGAGGA
GGTGGGTCCGATGCCTGTCCCTCAGCTGGACGAGTTGCAGGGGGAAGGCG
AAAGGGGTGTCAACTACGGTGGAGCACTTCTACCAGGAGAGGGTGCGGCT
ATTGCCCAGTTCGTTCAGAAAGGTCTGCGTATTCCTCGCCGTGGTGAAGT
GGGATGGGCTGGTCAAGAGATCGAAAAGCTGGAAGATTCTGGGTACGTGA
TGAGTGGTAGCCGCCACGCCCGCATGAACGCTGTTCGTCTGCGGAAGGAG
AACCAGGTTTTCAATGCTGAAGAGCGGCGAGCTCTAGCGCTGATCATGTT
CGAAGAAAAACAGCAAAAAGAAAACGAAATCTTGGGCAACTTCAGGCAAA
TGCTGACCGAGGTACGTGATGAGTGGTAGCCGCCACGCCCGCATGAACGC
TGTTCGTCTGCGGAAGGAGAACCAGGTTTTCAATGCTGAAGAGCGGCGAG
CTCTAGCGCTGATCATGTTCGAAGAAAAACAGCAAAAAGAAAACGAAATC
TTGGGCAACTTCAGGCAAATGCTGACCGAGTCAAGTCAAGAAGGGGAAAA
ACCGAGTGGCGAAGGATCAAATGCAGCATGATCAAGTCAAGAAGGGGAAA
AACCGAGTGGCGAAGGATCAAATGCAGCATGA
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