mRNA_L-elsbetiae_contig1456.3333.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1456.3333.1
Unique NamemRNA_L-elsbetiae_contig1456.3333.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1456.3333.1 vs. uniprot
Match: D7FKR1_ECTSI (GTP 3',8-cyclase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR1_ECTSI)

HSP 1 Score: 700 bits (1806), Expect = 2.400e-243
Identity = 349/369 (94.58%), Postives = 357/369 (96.75%), Query Frame = 1
Query:  760 MRQLAAQLAEAERVAREAEATLASHTEGIYRTPTGHENNMLSDMHGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQTKMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVRALSSLNGVRNVGVTTNGINLKRKIPALHEAGLTHINVSLDTLRPDRFAAITRRNGLDTVLASLDAALAHGYGGRLKINCVVMNGVNTDELADFLEFTRDQELDVRFIEWMPFDDNRWKDAKFFSYKSMLNVIRERYPDLERTVDSANDTTKWHRVPGYRGRVGFITSMSEHFCGTCNRLRITSDGNLKVCLFGDESLSLRDALRGGLSDAEISVLVRAAVLGKRAALGGHGDMYGIANAKNRPMTTIGG 1866
            MRQLAAQLA+AERVAREAE  LA  TEG  R P GHE++MLSD HGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQ+KMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVRALSSL GVRNVGVTTNGINLKRKIPAL EAGLTHINVSLDTL+PDRFAAITRR GLDTVLASLDAALAHGYGGRLKINCVVMNGVNTDELADFLEFTRDQE+DVRFIEWMPFDDNRWKDAKFFSY+SML+VIRERYPDLERTVDSANDTTKWHRVPGYRGRVGFITSMSEHFCGTCNRLRITSDGNLKVCLFGDESLSLRDALRGGLSDAEISVLVRAAVLGKRAALGGHGDMYGIANAKNRPMTTIGG
Sbjct:    1 MRQLAAQLADAERVAREAETMLARRTEGAVRPPPGHEHSMLSDTHGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQSKMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVRALSSLEGVRNVGVTTNGINLKRKIPALREAGLTHINVSLDTLQPDRFAAITRRKGLDTVLASLDAALAHGYGGRLKINCVVMNGVNTDELADFLEFTRDQEIDVRFIEWMPFDDNRWKDAKFFSYQSMLDVIRERYPDLERTVDSANDTTKWHRVPGYRGRVGFITSMSEHFCGTCNRLRITSDGNLKVCLFGDESLSLRDALRGGLSDAEISVLVRAAVLGKRAALGGHGDMYGIANAKNRPMTTIGG 369          
BLAST of mRNA_L-elsbetiae_contig1456.3333.1 vs. uniprot
Match: A0A835ZCI4_9STRA (GTP 3',8-cyclase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI4_9STRA)

HSP 1 Score: 464 bits (1193), Expect = 2.530e-150
Identity = 223/331 (67.37%), Postives = 266/331 (80.36%), Query Frame = 1
Query:  877 MLSDMHGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQTKMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVRALSSLNGVRNVGVTTNGINLKRKIPALHEAGLTHINVSLDTLRPDRFAAITRRNGLDTVLASLDAALAHGYGGRLKINCVVMNGVNTDELADFLEFTRDQELDVRFIEWMPFDDNRWKDAKFFSYKSMLNVIRERYPDLERTVDSANDTTKWHRVPGYRGRVGFITSMSEHFCGTCNRLRITSDGNLKVCLF-GDESLSLRDALRGGLSDAEISVLVRAAVLGKRAALGGHGDMYGIANAKNRPMTTIGG 1866
            ML D HGR HNYLRISLTERCNLRC YCMPEDGV LQPQ+ ++   EI R+A +FV +GVDK+RLTGGEPL+R+DL D+V  +S+L GVR++GVTTNG+ LK+++ AL  AGL+H+NVSLDTL+  RF AITRR GL+ VLA +DAAL  G+GGRLKINCVVM GVN DELA F+E    + LDVRFIEWMPFDDNRW + KF  Y SML  ++  YP+L R+ D  NDTTKW+RVPG+ GR+GFITSMSEHFCG+CNRLR+ +DG+LKVCLF GDE+LSLRDALR GL D ++  LV  AVL K+AALGGHGDM GIA + NRPM  IGG
Sbjct:  110 MLVDTHGRFHNYLRISLTERCNLRCTYCMPEDGVSLQPQSHLLTTDEIARVAQLFVRSGVDKVRLTGGEPLLRRDLADVVGRISAL-GVRHIGVTTNGLVLKQRVQALAAAGLSHVNVSLDTLQEQRFNAITRRRGLEQVLAGIDAALDAGFGGRLKINCVVMGGVNEDELAAFVELGSSRPLDVRFIEWMPFDDNRWNEGKFVGYSSMLRSLQGSYPELARSGDERNDTTKWYRVPGHEGRIGFITSMSEHFCGSCNRLRVMADGSLKVCLFDGDETLSLRDALRAGLPDRQLGALVHTAVLKKKAALGGHGDMQGIARSSNRPMILIGG 439          
BLAST of mRNA_L-elsbetiae_contig1456.3333.1 vs. uniprot
Match: A0A2D4C6L5_PYTIN (GTP 3',8-cyclase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6L5_PYTIN)

HSP 1 Score: 413 bits (1062), Expect = 3.770e-131
Identity = 201/343 (58.60%), Postives = 252/343 (73.47%), Query Frame = 1
Query:  838 EGIYRTPTGHENNMLSDMHGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQTKMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVRALSSLNGVRNVGVTTNGINLKRKIPALHEAGLTHINVSLDTLRPDRFAAITRRNGLDTVLASLDAALAHGYGGRLKINCVVMNGVNTDELADFLEFTRDQELDVRFIEWMPFDDNRWKDAKFFSYKSMLNVIRERYPDLERTVDSANDTTKWHRVPGYRGRVGFITSMSEHFCGTCNRLRITSDGNLKVCLFGDESLSLRDALRGGLSDAEISVLVRAAVLGKRAALGGHGDMYGIANAKNRPMTTIGG 1866
            E IYR  T    +   D  GR H YLRISLTERCNLRC YCMPE+GV LQPQ  +++  EI+RLAS+F  +GV +IRLTGGEPL+R+DL D+V  L S+ G+ +VG+TTNGI L++K+ AL  AG+  +N+SLDTLR DRFA ITRR G   V+ ++  A   G+   LKINCVVM  VN DEL DF+ FT    +DVRFIEWMPFD N+W D  F S+  M+  IR++YP + +  D ANDT+K   VPG RG+ GFITSMS+HFCGTCNR+R+T+DGNLKVCLFG+  +SLRDALR G++DA++  ++  AV  K+ ALGGHGDMYGI+ AKNRPM  IGG
Sbjct:   84 EEIYRAETVPVPHQFVDRFGRAHTYLRISLTERCNLRCRYCMPEEGVPLQPQDDLLSTTEIVRLASLFAASGVTRIRLTGGEPLLRRDLVDLVTQLRSIPGITSVGITTNGIVLQKKLAALQHAGVDRLNISLDTLRADRFAQITRRQGFQRVMDAIRDAQTMGFAP-LKINCVVMRDVNLDELLDFVAFTEHNAVDVRFIEWMPFDSNKWNDTTFVSFDEMMTRIRDKYPTIAKLADDANDTSKAFHVPGSRGQFGFITSMSQHFCGTCNRMRLTADGNLKVCLFGNTEVSLRDALRYGVADADVQRIIDVAVKRKKFALGGHGDMYGISKAKNRPMILIGG 425          
BLAST of mRNA_L-elsbetiae_contig1456.3333.1 vs. uniprot
Match: K3WDN0_GLOUD (GTP 3',8-cyclase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDN0_GLOUD)

HSP 1 Score: 407 bits (1046), Expect = 9.750e-130
Identity = 192/329 (58.36%), Postives = 247/329 (75.08%), Query Frame = 1
Query:  880 LSDMHGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQTKMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVRALSSLNGVRNVGVTTNGINLKRKIPALHEAGLTHINVSLDTLRPDRFAAITRRNGLDTVLASLDAALAHGYGGRLKINCVVMNGVNTDELADFLEFTRDQELDVRFIEWMPFDDNRWKDAKFFSYKSMLNVIRERYPDLERTVDSANDTTKWHRVPGYRGRVGFITSMSEHFCGTCNRLRITSDGNLKVCLFGDESLSLRDALRGGLSDAEISVLVRAAVLGKRAALGGHGDMYGIANAKNRPMTTIGG 1866
            L D  GR H YLRISLTERCNLRC YCMPEDGVDLQPQ  +++  EI+RLA +F  AGV++IRLTGGEPL+R+D+ ++V  L +++G+ +VGVTTNGI L+RK+ AL  AG+  +N+SLDTL  D+F  ITRR G   V+ S+  A A G+   +KINCV+M   N +E+ DF+ FT    +DVRFIEWMPFD N+W D  F S+K M+ +IRER+P +E+  D  NDT+K   VPG++G+ GFITSMSEHFCG+CNRLR+T+DGNLKVCLFG+  +SLRDA+R  + D +I  ++  AV  K+ ALGGHGDMYGI+ AKNRPM  IGG
Sbjct:   34 LVDRFGREHTYLRISLTERCNLRCRYCMPEDGVDLQPQDNLMSTAEIVRLARLFAAAGVNRIRLTGGEPLLRRDIVELVTQLRAIDGINSVGVTTNGITLQRKLKALQAAGVDRLNISLDTLHADKFTKITRRQGFQRVMDSIVEAQALGFSP-VKINCVIMRHFNMNEIVDFVAFTEKMAIDVRFIEWMPFDSNKWNDETFVSFKEMMALIRERFPTVEKLADDPNDTSKAFHVPGFKGQFGFITSMSEHFCGSCNRLRLTADGNLKVCLFGNSEVSLRDAMRHNILDDDIRDIIDVAVKRKKFALGGHGDMYGISKAKNRPMILIGG 361          
BLAST of mRNA_L-elsbetiae_contig1456.3333.1 vs. uniprot
Match: A0A8K1CME9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CME9_PYTOL)

HSP 1 Score: 409 bits (1051), Expect = 2.350e-129
Identity = 194/338 (57.40%), Postives = 255/338 (75.44%), Query Frame = 1
Query:  853 TPTGHENNMLSDMHGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQTKMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVRALSSLNGVRNVGVTTNGINLKRKIPALHEAGLTHINVSLDTLRPDRFAAITRRNGLDTVLASLDAALAHGYGGRLKINCVVMNGVNTDELADFLEFTRDQELDVRFIEWMPFDDNRWKDAKFFSYKSMLNVIRERYPDLERTVDSANDTTKWHRVPGYRGRVGFITSMSEHFCGTCNRLRITSDGNLKVCLFGDESLSLRDALRGGLSDAEISVLVRAAVLGKRAALGGHGDMYGIANAKNRPMTTIGG 1866
            +P+   +  L+D +GR H YLRISLTERCNLRC YCMPEDGVDLQPQ  +++  EI+RLA +F  +GV +IRLTGGEPL+R+DL D+V  L ++ G+ +VG+TTNGI L+RK+ AL +AG+  +N+SLDTL+PD+F  ITRR G   V+ ++  A A G+G  +KINCVVM   N  E+ DF+ FT+   +DVRFIEWMPF+ N+W D+ F S+  M+ +IRE YPD+E+  D  +DT+K  +VPG+ G+ GFITSMSEHFCG+CNRLR+T+DGNLKVCLFG+  +SLRDA+R  L D +I  ++  AV  K+ ALGGHGDMYGI+ AKNRPM  IGG
Sbjct:  101 SPSSRTSPRLTDRYGRVHTYLRISLTERCNLRCRYCMPEDGVDLQPQDDLLSTPEIIRLARLFAASGVTRIRLTGGEPLLRRDLIDLVTELRAIPGINSVGITTNGIVLQRKLLALQKAGVDRLNISLDTLQPDKFTQITRRQGFQRVIDAITEAQALGFGP-VKINCVVMRDFNLSEVLDFVAFTKTNAVDVRFIEWMPFNSNQWNDSTFVSFSEMMGMIREEYPDVEKLEDDEHDTSKAFKVPGHLGQFGFITSMSEHFCGSCNRLRLTADGNLKVCLFGNTEVSLRDAIRFDLPDQDIQDVIDVAVTRKKFALGGHGDMYGISKAKNRPMILIGG 437          
BLAST of mRNA_L-elsbetiae_contig1456.3333.1 vs. uniprot
Match: A0A5D6XSV9_9STRA (GTP 3',8-cyclase (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSV9_9STRA)

HSP 1 Score: 407 bits (1045), Expect = 6.800e-129
Identity = 200/329 (60.79%), Postives = 246/329 (74.77%), Query Frame = 1
Query:  880 LSDMHGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQTKMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVRALSSLNGVRNVGVTTNGINLKRKIPALHEAGLTHINVSLDTLRPDRFAAITRRNGLDTVLASLDAALAHGYGGRLKINCVVMNGVNTDELADFLEFTRDQELDVRFIEWMPFDDNRWKDAKFFSYKSMLNVIRERYPDLERTVDSANDTTKWHRVPGYRGRVGFITSMSEHFCGTCNRLRITSDGNLKVCLFGDESLSLRDALRGGLSDAEISVLVRAAVLGKRAALGGHGDMYGIANAKNRPMTTIGG 1866
            L D  GR H YLRISLTERCNLRC YCMPEDGV LQP   +++  EI+ LA +F  +GV +IRLTGGEPL+R+DL ++V  L ++ G+ +VGVTTNG+ L+RK+ AL  AG+  +N+SLDTLR DRFA +TRR GL  VL ++  A A G+   +K+NCVVM  VN DEL DF+  TR + LDVRFIEWMPFD NRW DA F  +  ML  IR R+PD+E+  D A++T K  RVPG+ G+ GFITSMSEHFCG CNRLR+T+DG+LKVCLFG+  +SLRDALR G+SD ++  LV AAV  K  ALGGHGDMYGI+ AKNRPM  IGG
Sbjct:   81 LVDRFGREHTYLRISLTERCNLRCRYCMPEDGVALQPAESLLSTAEIVHLARLFAASGVTRIRLTGGEPLLRRDLVELVAQLRAVEGIDSVGVTTNGLVLQRKLRALQAAGVDRLNISLDTLRADRFAGVTRRAGLQRVLDAVAEAEALGFAP-VKLNCVVMRHVNLDELVDFVALTRARALDVRFIEWMPFDSNRWSDATFVPFAEMLAAIRARFPDVEKLPDGAHETAKAFRVPGFTGQFGFITSMSEHFCGACNRLRLTADGSLKVCLFGNTEVSLRDALRFGVSDDDVRALVDAAVKRKHFALGGHGDMYGISRAKNRPMILIGG 408          
BLAST of mRNA_L-elsbetiae_contig1456.3333.1 vs. uniprot
Match: A0A7S0CMD9_9STRA (GTP 3',8-cyclase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CMD9_9STRA)

HSP 1 Score: 403 bits (1036), Expect = 1.280e-126
Identity = 206/384 (53.65%), Postives = 261/384 (67.97%), Query Frame = 1
Query:  880 LSDMHGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQTKMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVR---------ALSSLNGVRNVGVTTNGINLKRKIPALHEAGLTHINVSLDTLRPDRFAAITRRNGLDTVLASLDAALAH-------GYGGRLKINCVVMNGVNTDELADFLEFTRDQELDVRFIEWMPFDDNRWKDAKFFSYKSMLNVIR-----------------ERYPDL--------------ERTVDSANDTTKWHRVPGYRGRVGFITSMSEHFCGTCNRLRITSDGNLKVCLFGDESLSLRDALRG-------GLSDAEISVLVRAAVLGKRAALGGHGDMYGIANAK-NRPMTTIGG 1866
            L D + RHHNYLR+SL ERCNLRC YCMP +GV L P++ ++  +E+LR++ +F+  GV+K+RLTGGEP +RKDL DI+R         A++  NGV+++G+TTNG+ L+RK+PAL +AGLTH+N+SLDTL+ D+F  ITRR GL  VL+S+++ +++          GR+K+NCVVM   NT+EL DF+E T+D  LDVRFIEWMPF DN W D KF SY+ ML  I                  E  P L              ER  D  NDTTKW+RVPGY+GRVGFITSMSEHFCGTCNRLRIT+DG LKVCLFG + LSLRD LR         ++D ++ +L+  AV  K+AALGGHGDMYGIA A  NRPMT IGG
Sbjct:   91 LQDKYQRHHNYLRLSLVERCNLRCQYCMPPEGVPLSPKSSLLTTEELLRISKLFIKNGVNKVRLTGGEPTLRKDLVDIIRGIAVAGHEDAIAGGNGVKSIGITTNGLTLERKLPALIDAGLTHVNLSLDTLQDDKFTDITRRKGLKRVLSSIESCVSYLSPPTAPEKVGRVKVNCVVMQHFNTNELRDFVELTKDMNLDVRFIEWMPFSDNGWNDGKFMSYQDMLRAITSDNTPLLSANADFASTLEAAPSLPMVASLQNVPPLPLERISDGPNDTTKWYRVPGYQGRVGFITSMSEHFCGTCNRLRITADGGLKVCLFGGDELSLRDVLRYTDTNDNYSVTDDDLELLIGMAVRKKKAALGGHGDMYGIAKANDNRPMTLIGG 474          
BLAST of mRNA_L-elsbetiae_contig1456.3333.1 vs. uniprot
Match: A0A2P4X0W1_9STRA (GTP 3',8-cyclase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X0W1_9STRA)

HSP 1 Score: 400 bits (1029), Expect = 1.700e-126
Identity = 198/376 (52.66%), Postives = 262/376 (69.68%), Query Frame = 1
Query:  739 PVRSVESMRQLAAQLAEAERVAREAEATLASHTEGIYRTPTGHENNMLSDMHGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQTKMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVRALSSLNGVRNVGVTTNGINLKRKIPALHEAGLTHINVSLDTLRPDRFAAITRRNGLDTVLASLDAALAHGYGGRLKINCVVMNGVNTDELADFLEFTRDQELDVRFIEWMPFDDNRWKDAKFFSYKSMLNVIRERYPDLERTVDSANDTTKWHRVPGYRGRVGFITSMSEHFCGTCNRLRITSDGNLKVCLFGDESLSLRDALRGGLSDAEISVLVRAAVLGKRAALGGHGDMYGIANAKNRPMTTIGG 1866
            P  S++ +RQ+ A++ ++E  A                 PT      L D  GR H YLRISLTERCNLRC YCMPEDGV LQP   ++   EI+RLA +F  +GV +IRLTGGEPL+R+DL ++V  L ++ G+ +VG+TTNGI L+RK+ AL +AG   +N+SLDTL+P++FA ITRR G   V+ S+  A A G+   LKINCVV    N DE+ DF+ FT++  +DVRFIEWMPFD NRW D  F  +K M+ +I+ ++P + +  D ANDT+K   VPG++G+ GFITSMSEHFCG+CNRLR+T+DGNLKVCLFG+  +SLRDA+R  ++D +I  +V  AV  K+ ALGGHGDMYG++ AKNRPM  IGG
Sbjct:   59 PKESLQQIRQILAEIRQSEEAA-----------------PT-----QLVDRFGRAHTYLRISLTERCNLRCQYCMPEDGVPLQPAEDLLTTSEIIRLAKLFASSGVKRIRLTGGEPLLRRDLVELVTQLRAIPGIESVGITTNGITLQRKLLALQQAGADRLNISLDTLKPEKFAHITRRQGFTRVMNSIVEAQALGFSP-LKINCVVQRHFNLDEVVDFVAFTKNHAVDVRFIEWMPFDSNRWNDETFVPFKEMMELIKAQFPPVAKLQDGANDTSKAFHVPGFKGQFGFITSMSEHFCGSCNRLRLTADGNLKVCLFGNTEVSLRDAMRYNIADKDIRNIVDVAVKRKQFALGGHGDMYGLSKAKNRPMILIGG 411          
BLAST of mRNA_L-elsbetiae_contig1456.3333.1 vs. uniprot
Match: A0A662YF41_9STRA (GTP 3',8-cyclase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YF41_9STRA)

HSP 1 Score: 399 bits (1026), Expect = 5.560e-126
Identity = 190/329 (57.75%), Postives = 244/329 (74.16%), Query Frame = 1
Query:  880 LSDMHGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQTKMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVRALSSLNGVRNVGVTTNGINLKRKIPALHEAGLTHINVSLDTLRPDRFAAITRRNGLDTVLASLDAALAHGYGGRLKINCVVMNGVNTDELADFLEFTRDQELDVRFIEWMPFDDNRWKDAKFFSYKSMLNVIRERYPDLERTVDSANDTTKWHRVPGYRGRVGFITSMSEHFCGTCNRLRITSDGNLKVCLFGDESLSLRDALRGGLSDAEISVLVRAAVLGKRAALGGHGDMYGIANAKNRPMTTIGG 1866
            L D  GR H YLRISLTERCNLRC YCMPEDGV LQPQ +++   EI+RL  +F  AGV +IRLTGGEPL+R+DL ++V  L ++ G+ +VG+TTNGI L+RK+ AL +AG   +NVSLDTL+PD+F  ITRR G   V+ ++  A   G+   LK+NCVV    N DE+ADF+ FT +  +DVRFIEWMPFD NRW D  F  +K M+  IR R+P +++  D ANDT+K   VPG++G+ GFITSMSEHFCG+CNRLR+T+DGNLKVCLFG+  +SLRDA+R  ++D +I  ++  AV  K+ ALGGHGDMYG++ AKNRPM  IGG
Sbjct:   89 LVDRFGRAHTYLRISLTERCNLRCRYCMPEDGVALQPQEELLATPEIVRLVKLFASAGVTRIRLTGGEPLLRRDLVELVAQLRAVPGIESVGITTNGITLQRKLLALQQAGADRLNVSLDTLQPDKFTHITRRQGFSRVMDAILEAQTLGFSP-LKLNCVVQRHFNLDEVADFVAFTEEMAVDVRFIEWMPFDSNRWNDETFVPFKEMMAAIRARFPTVQKLQDGANDTSKAFHVPGFKGQFGFITSMSEHFCGSCNRLRLTADGNLKVCLFGNTEVSLRDAMRYDIADKDIRDIIDVAVKRKKFALGGHGDMYGLSKAKNRPMILIGG 416          
BLAST of mRNA_L-elsbetiae_contig1456.3333.1 vs. uniprot
Match: A0A329RR81_9STRA (GTP 3',8-cyclase n=11 Tax=Phytophthora TaxID=4783 RepID=A0A329RR81_9STRA)

HSP 1 Score: 396 bits (1018), Expect = 7.060e-125
Identity = 189/333 (56.76%), Postives = 244/333 (73.27%), Query Frame = 1
Query:  868 ENNMLSDMHGRHHNYLRISLTERCNLRCVYCMPEDGVDLQPQTKMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVRALSSLNGVRNVGVTTNGINLKRKIPALHEAGLTHINVSLDTLRPDRFAAITRRNGLDTVLASLDAALAHGYGGRLKINCVVMNGVNTDELADFLEFTRDQELDVRFIEWMPFDDNRWKDAKFFSYKSMLNVIRERYPDLERTVDSANDTTKWHRVPGYRGRVGFITSMSEHFCGTCNRLRITSDGNLKVCLFGDESLSLRDALRGGLSDAEISVLVRAAVLGKRAALGGHGDMYGIANAKNRPMTTIGG 1866
            E + L D  GR H YLRISLTERCNLRC YCMPEDGV LQP  +++   EI RLA +F  +GV +IRLTGGEPL+R+DL ++V  + ++ G+ +VG+TTNGI L++K+ AL +AG+  +NVSLDTL+PD+FA ITRR G   V+ S+  A   G+   LKINCVV    N DE+ DF+ FT    +DVRFIEWMPFD NRW D  F  +K M+ +I+  +P +E+  D  NDT+K   VPG++G+ GFITSMSEHFCG+CNRLR+T+DGNLKVCLFG+  +SLRDA+R  ++D +I  +V  AV  K+ ALGGHGDMYG++ AKNRPM  IGG
Sbjct:   80 ETSQLLDRFGRAHTYLRISLTERCNLRCRYCMPEDGVPLQPTEELLTTSEITRLAKVFASSGVKRIRLTGGEPLLRRDLVELVAQIRAIPGIESVGITTNGITLQKKLLALQQAGVDRLNVSLDTLKPDKFAHITRRQGFTRVMNSILEAQTLGFSP-LKINCVVQRRFNLDEVVDFVAFTEKHAVDVRFIEWMPFDSNRWNDETFVPFKEMMGLIQAEFPLVEKLPDGTNDTSKAFHVPGFKGQFGFITSMSEHFCGSCNRLRLTADGNLKVCLFGNTEVSLRDAMRYNIADNDIRDIVDVAVKRKKFALGGHGDMYGLSKAKNRPMVLIGG 411          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1456.3333.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKR1_ECTSI2.400e-24394.58GTP 3',8-cyclase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A835ZCI4_9STRA2.530e-15067.37GTP 3',8-cyclase n=1 Tax=Tribonema minus TaxID=303... [more]
A0A2D4C6L5_PYTIN3.770e-13158.60GTP 3',8-cyclase n=2 Tax=Pythium insidiosum TaxID=... [more]
K3WDN0_GLOUD9.750e-13058.36GTP 3',8-cyclase n=1 Tax=Globisporangium ultimum (... [more]
A0A8K1CME9_PYTOL2.350e-12957.40Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XSV9_9STRA6.800e-12960.79GTP 3',8-cyclase (Fragment) n=1 Tax=Pythium brassi... [more]
A0A7S0CMD9_9STRA1.280e-12653.65GTP 3',8-cyclase n=1 Tax=Proboscia inermis TaxID=4... [more]
A0A2P4X0W1_9STRA1.700e-12652.66GTP 3',8-cyclase n=1 Tax=Phytophthora palmivora va... [more]
A0A662YF41_9STRA5.560e-12657.75GTP 3',8-cyclase n=2 Tax=Nothophytophthora sp. Chi... [more]
A0A329RR81_9STRA7.060e-12556.76GTP 3',8-cyclase n=11 Tax=Phytophthora TaxID=4783 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1456contigL-elsbetiae_contig1456:4702..9561 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score701.0
Seed ortholog evalue3.1e-199
Seed eggNOG ortholog2880.D7FKR1
Preferred nameCNX2
KEGG rclassRC03420,RC03425
KEGG koko:K03639,ko:K20967
KEGG ReactionR09394,R11372
KEGG Pathwayko00790,ko01100,ko04122,map00790,map01100,map04122
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009507,GO:0009536,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.cyclic pyranopterin monophosphate synthase activity
EggNOG OGsCOG2896@1,KOG2876@2759
EC4.1.99.22,4.6.1.17
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptioncyclic pyranopterin monophosphate synthase
Ec32 orthologEc-21_001800.1
Exons8
Model size3169
Cds size1197
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1456.3333.1prot_L-elsbetiae_contig1456.3333.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1456 5374..8188 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815584.2648969-UTR-L-elsbetiae_contig1456:4701..53731622815584.2648969-UTR-L-elsbetiae_contig1456:4701..5373Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1456 4702..5373 +
1691682974.183517-UTR-L-elsbetiae_contig1456:4701..53731691682974.183517-UTR-L-elsbetiae_contig1456:4701..5373Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1456 4702..5373 +
1622815584.393615-UTR-L-elsbetiae_contig1456:8188..92221622815584.393615-UTR-L-elsbetiae_contig1456:8188..9222Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1456 8189..9222 +
1691682974.2685792-UTR-L-elsbetiae_contig1456:8188..92221691682974.2685792-UTR-L-elsbetiae_contig1456:8188..9222Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1456 8189..9222 +
1622815584.4123142-UTR-L-elsbetiae_contig1456:9295..95611622815584.4123142-UTR-L-elsbetiae_contig1456:9295..9561Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1456 9296..9561 +
1691682974.2808368-UTR-L-elsbetiae_contig1456:9295..95611691682974.2808368-UTR-L-elsbetiae_contig1456:9295..9561Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1456 9296..9561 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815584.275052-CDS-L-elsbetiae_contig1456:5373..56361622815584.275052-CDS-L-elsbetiae_contig1456:5373..5636Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 5374..5636 +
1691682974.1951952-CDS-L-elsbetiae_contig1456:5373..56361691682974.1951952-CDS-L-elsbetiae_contig1456:5373..5636Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 5374..5636 +
1622815584.28476-CDS-L-elsbetiae_contig1456:6019..61671622815584.28476-CDS-L-elsbetiae_contig1456:6019..6167Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 6020..6167 +
1691682974.2043657-CDS-L-elsbetiae_contig1456:6019..61671691682974.2043657-CDS-L-elsbetiae_contig1456:6019..6167Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 6020..6167 +
1622815584.298286-CDS-L-elsbetiae_contig1456:6348..64921622815584.298286-CDS-L-elsbetiae_contig1456:6348..6492Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 6349..6492 +
1691682974.2142925-CDS-L-elsbetiae_contig1456:6348..64921691682974.2142925-CDS-L-elsbetiae_contig1456:6348..6492Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 6349..6492 +
1622815584.3441272-CDS-L-elsbetiae_contig1456:6820..69331622815584.3441272-CDS-L-elsbetiae_contig1456:6820..6933Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 6821..6933 +
1691682974.222484-CDS-L-elsbetiae_contig1456:6820..69331691682974.222484-CDS-L-elsbetiae_contig1456:6820..6933Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 6821..6933 +
1622815584.3540034-CDS-L-elsbetiae_contig1456:7143..73001622815584.3540034-CDS-L-elsbetiae_contig1456:7143..7300Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 7144..7300 +
1691682974.2307513-CDS-L-elsbetiae_contig1456:7143..73001691682974.2307513-CDS-L-elsbetiae_contig1456:7143..7300Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 7144..7300 +
1622815584.3663707-CDS-L-elsbetiae_contig1456:7451..75551622815584.3663707-CDS-L-elsbetiae_contig1456:7451..7555Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 7452..7555 +
1691682974.2435684-CDS-L-elsbetiae_contig1456:7451..75551691682974.2435684-CDS-L-elsbetiae_contig1456:7451..7555Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 7452..7555 +
1622815584.379605-CDS-L-elsbetiae_contig1456:7920..81881622815584.379605-CDS-L-elsbetiae_contig1456:7920..8188Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 7921..8188 +
1691682974.2537644-CDS-L-elsbetiae_contig1456:7920..81881691682974.2537644-CDS-L-elsbetiae_contig1456:7920..8188Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1456 7921..8188 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1456.3333.1

>prot_L-elsbetiae_contig1456.3333.1 ID=prot_L-elsbetiae_contig1456.3333.1|Name=mRNA_L-elsbetiae_contig1456.3333.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=399bp
MCFDITPGHCGIYSFAGRGPEPPVRSVESMRQLAAQLAEAERVAREAEAT
LASHTEGIYRTPTGHENNMLSDMHGRHHNYLRISLTERCNLRCVYCMPED
GVDLQPQTKMINQQEILRLASMFVDAGVDKIRLTGGEPLVRKDLPDIVRA
LSSLNGVRNVGVTTNGINLKRKIPALHEAGLTHINVSLDTLRPDRFAAIT
RRNGLDTVLASLDAALAHGYGGRLKINCVVMNGVNTDELADFLEFTRDQE
LDVRFIEWMPFDDNRWKDAKFFSYKSMLNVIRERYPDLERTVDSANDTTK
WHRVPGYRGRVGFITSMSEHFCGTCNRLRITSDGNLKVCLFGDESLSLRD
ALRGGLSDAEISVLVRAAVLGKRAALGGHGDMYGIANAKNRPMTTIGG*
back to top

mRNA from alignment at L-elsbetiae_contig1456:4702..9561+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1456.3333.1 ID=mRNA_L-elsbetiae_contig1456.3333.1|Name=mRNA_L-elsbetiae_contig1456.3333.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4860bp|location=Sequence derived from alignment at L-elsbetiae_contig1456:4702..9561+ (Laminarionema elsbetiae ELsaHSoW15)
CATAGGCAAGTAGGCCTGTGAACACAGAATCGACCGCGGAATGAAATGGA TTAATGAGTACGGACAGATGCAGGTACTGGGTAGAGAATAGGAACGAGTA GTATTGTGATGGCAAAACAACCAAGGGTAGATGGAGGCAGGCAGACGACT GATCCAGTGAACATGCGGGCAAGAAGCGATTCCGCCGGTCCCCTGTGCCC TGCTGGCGTGTAACTGTGATGGGATGAAATCCACAACGGGGGGCGCTTTT AAAGAGAGCATATGTGTTGCATGCCGAGTCGACTTCTACCCCCCGTCGAC ACGTTTCCCCCTTTTTAACAACCACCCGCCTCTTTTGATTCTGTAAAGAG TACGAAGAACACCCACACTTCGCGCCTATAGTTCTACTTCGAACCAGGTA ACGAAACCTGGGCGTGTATTCGTCCACATAGACCAAAACCATTCTAGAAG GAATCGAACGTTGGATGCACCGCGGAAACCAGGTTGTCAAGGTTGCTCAC TACCGCATAAATTTTATGTGCCCGCCTACGAGGGTACTACGAGTAAACTT GACAAAGAACAGACCAATTCGTTCTCGGTATCCTTCTGGCCTTGAGACCT TTAAGACTTCCCGAGACAGAGCAAGCACACAGCAGGCCTCTCGGAACCTT GTCCATACATACGTGGCAGTATATGTGTTTCGACATTACCCCCGGACATT GTGGTATCTACTCGTTTGCAGGTCGCGGACCCGAACCGCCCGTGCGTTCG GTGGAATCGATGCGTCAACTAGCTGCGCAGCTTGCAGAGGCGGAGCGTGT CGCCCGCGAGGCAGAGGCCACACTCGCCAGCCACACAGAAGGCATTTACC GAACACCGACTGGTCACGAAAACAACATGCTATCAGACATGCACGGGCGC CATCACAACTACCTACGCATTTCTCTCACAGAGAGGTAAGTGGGCACTGC TTTGTTCGCACCGAGCTGTTGTTTCATTTTGTTCCTTGATGAAACGGGGT GTAGCCCTAGTTTTGAAGATGCTGGATAAGGCAGTACTGCTGTTCCCACT CTGGTGGACATTTTAGATAATGGTTGCGGCGCGGAATGGTGTTACAGGGC ACATATACTTCAAGGCCTGGTTGTGTGGGGTAGTCGACATGGACAGCGCG CACTTCATTCCTTGTGTCCTGTCGGGTGCACGATTGCACACGGTCGCGCA AGCTCATTCCGTTGCGTGTTTCACCACGTGTGCATGGTGTGTTCGCCTTT TGTCTGTTTGAGAGTCCATCTATATGTTGAGCGCTACACCTCCAAATTTG TGGCTGGTGACTTGGCAGGTGCAACTTGAGATGCGTGTACTGCATGCCTG AAGACGGCGTCGACTTGCAGCCCCAAACGAAGATGATCAACCAGCAGGAG ATTTTGAGGTTGGCAAGCATGTTCGTGGACGCAGGCGTCGACAAGATCCG ACTAACTGGGGGCGAGGTACGTTTCGTCCGCGCACCCACGGACACTCTGT CGACCAATATCTCAGTACTGGTAAGCTCTCAAGGTGTGGACTTGTCTCGG GGCCCAGGGTGCCGCTTGGAATTGTGACCAGGTGTTCGTCTACATAGATT CCTAATTTTATTCCATGACCTCACCTACGCCGGTCTGTTTTCAACAGCCA CTTGTGCGGAAAGACTTGCCTGATATTGTCCGAGCGCTGAGCTCGTTGAA CGGAGTGCGCAACGTCGGGGTGACTACGAACGGAATCAACCTCAAGCGGA AGATTCCTGCTCTACACGAGGCAGGCCTCACCCACATCAACGTGAGTGTA TAGTGTCCGGGAGTGCTCGAAACTATACTTGTCGGATGTGGTGCGCCACC AAGAGTTAAACCAAACCTTCGGATCCCCTGTGCGCCGGCGAAAAATGTAT CAGCAGTCTTTTCGTTCTTGTTTCGACATCGATCTGAGAGGCGTGATGTC AATCAATTGTTGAGTGCAGCAGATTCACCTGCTGGGTTCCGTGAAGCCAC TCGACACGCCACCAAAAATCGCTTCTGCCTTGGATGCGCAGTTTTCCCTC AACAATGTTACGGGCCCTACTGGCTTTTTTAAGCCCACCTTCCGTTTCCA TTTTTTTTCGATTTGTTAGGTGAGCCTGGATACGCTGCGGCCGGACCGCT TTGCGGCCATCACTCGTAGAAATGGCCTCGACACAGTCTTGGCGTCTTTG GATGCAGCGCTGGCTCATGGGTATGGGGGAAGGTGAGAGGGGGCTAGAGG TGTGTACGAAAAAGCGCCTCCTGCAAAGATATGTGGTGTGTTGTTCCCGC TCTCATCTGATGCGTCATACCAGTACACGGTTTGAAACAAAAGCTGGTTC CCTCGGAAATTTGTGAGTGACAATTGTACACAAAACAATTAACTGTTTTC ACGAAAACAAAATGTTGCACACGTGATCGTGTGTGGTGGCAGGCTGAAGA TCAACTGCGTCGTGATGAACGGTGTGAACACGGATGAGCTAGCAGACTTT TTAGAGTTCACACGGGACCAGGAGCTTGACGTTCGTTTCATCGAATGGAT GCCTTTCGACGACAACCGGTGGAAAGACGCCAAGTTTTTCTCTTACAAGG TGAGGAAAACGGTAGTACACCTGCCTTCATCAGTCAACCGAGTTTTCGTA CCTACCCTATCTTTGGGTGTCAGCACGAGCTGTACACGACACCGTGGGTG GGCCCTTCACCTCTCATATTGCGTCGCTTCTTACGTCGCGTGTTTGACAG TCCATGTTGAACGTGATTCGGGAACGCTACCCCGATCTCGAGAGGACAGT CGACTCCGCCAACGACACCACCAAGTGGCACAGAGTTCCGGGATACAGGG GCAGGTAAACATTTTGTTAACGGGTAACTTCGGGACGCACCGTCCTGCGT ACGTCCTGTGATTGCGCATGCTGCACGAAACATTATCTGCAGTTGGAGCA TCGCCGTGCCTTGTCGCACGTACTACTGTTGATGTTTGTTTTTACCACCG GGGCTGCTCTGACAACGGAGTTTGGAATCGGTGCCAAGCCTTCCATGGGG TGGATTTAACATGCAAAATTGTTGTTAAACTGGCATGAAAACTGGCATCA GAGACCTATTTGTATCTTCAGACGACGGAACAGAAAAAGAAAGGTATGTC ACGTGCGTGTTGGCAATTTCAAACACCCTAAAACTATACACAAACTTGAT GCTGGTGACGTTCGTTCAGGGTGGGGTTCATCACGTCGATGAGCGAACAC TTCTGCGGCACGTGTAATCGTCTTCGCATAACATCGGATGGGAACTTGAA GGTCTGCCTTTTTGGAGACGAAAGCCTCAGCCTTCGCGACGCACTCAGAG GAGGTCTCTCTGATGCAGAAATATCAGTCCTTGTACGGGCCGCAGTGTTG GGTAAGCGTGCAGCCCTTGGAGGCCATGGGGACATGTACGGTATTGCGAA TGCCAAAAACCGGCCGATGACTACGATCGGAGGATAAAAGTCATGACGTG CTGTGATATTGGAGACAAGACACGGGCGTGCGTAACGTAACGCACGTGCT TTTTATTTTGCTGCTTTGTGGAAACTCAACTGCGGAGCAGATTGATTCCA CCTGGCCGTAAATTTGATGTAGGCAGCGGGATGCAAGCTTTCATGCGTCT TGGCTGCTGCTTTGGCGGGAGCATTCCATTATTGCTGGCAGCACATGATT TAGGCATCCTGAACCATGGCCGCGAATGTAATTACTGGACTGCGTTTATT TTTATGGTGAAGTCCACATTTTTGGTCAATCCATCCCGCAGGATCCGTAT TGTCGTGCGTGCTCGGTAACGCCGAGCCGAAGCTCTCTTCAGTGAGAACG TGGCACGTAATTCCCTGAATCGTAGTTGCCCATGTTTCCTGCAAATATTT GTAAATCGCGTTGAGAGGTCTGTGTGTGTCCCACGGTTCTTTGACCTGAG AACCGTGTTGTGTATCGTTTACACAAAGTCCCGCTTTGTGTTTCGCCGGT TGCCTACGTAGTGGCCTGCCAAGTGTGGTGTTCGTGCCCATTTTTTTGTT TAATCTGTTGATGCGACGAGGGGCGGCGACGGGCTGAGCCTTCGGTAAAC GCATATCGTGTGCTAGTGCTTCCGACATTACTTTTTTACGATCAGATATG AGATACCAGTGAAGTATTGTTTTGGCGGGTATCAACCATGAAAAAATATG AAATTAGTTTGGAAATCTAGGCGTCAAAAATTGGAACCAACGCTGGAAGG GAGTTTGGACGGTTTGGACGATGCCCGCTTCCTGGCTGCTCAATTAGGGC GCGTCTTAACGAAAAAATTGTCAGCCATTTTGGAACGCGAATTGAAAACG AATTTGCTTGTGATTGGTCAAGACCAAAATATCATCCACGGGGCTGAGAG GGGGGCACCTTTAGCATGCCACGGACCTAGCTTTTGCCTCTCCAAAAATC AACCTCCGAGAGGGTTGATTTTTCGCAGGCACTCGAACGAATTGGATTGA CCCACGACACGTACATGCGGAGCCCCCGTGCTGGCGCATTTTCCCGTTTC CAAGCTTCCATACCGATCGCCTGGTACCAGCGGTTTGGGGATAGCTGTAT TGTTACAGGCTGTGCGCGTGTAAAAAAAGCAGGCTCTCTGTTCTGTGCAC GGCAGCTGTTTTCGAAAAAATGATGCTAACGCGGTGGTGTCGTTGCATCT CCACAACCCAAAAATCAGTTCTAGCTAACGTTTGAGGATGAGGTTTGGAC CATGAGGGCCTCTTGTTCAGAGCTAACCTTGTGACTTGTGATATTTTTCT AGCTACCCTGTCGCACATGAGCTGCCTGTGAACTTTCAGTCAACCTGTCC ATCAGCGGCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1456:4702..9561+

>mRNA_L-elsbetiae_contig1456.3333.1 ID=mRNA_L-elsbetiae_contig1456.3333.1|Name=mRNA_L-elsbetiae_contig1456.3333.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2394bp|location=Sequence derived from alignment at L-elsbetiae_contig1456:4702..9561+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTGTTTCGACATTACCCCCGGACATTGTGGTATCTACTCGTTTGCAGG
TCGCGGACCCGAACCGCCCGTGCGTTCGGTGGAATCGATGCGTCAACTAG
CTGCGCAGCTTGCAGAGGCGGAGCGTGTCGCCCGCGAGGCAGAGGCCACA
CTCGCCAGCCACACAGAAGGCATTTACCGAACACCGACTGGTCACGAAAA
CAACATGCTATCAGACATGCACGGGCGCCATCACAACTACCTACGCATTT
CTCTCACAGAGAGATGTGTTTCGACATTACCCCCGGACATTGTGGTATCT
ACTCGTTTGCAGGTCGCGGACCCGAACCGCCCGTGCGTTCGGTGGAATCG
ATGCGTCAACTAGCTGCGCAGCTTGCAGAGGCGGAGCGTGTCGCCCGCGA
GGCAGAGGCCACACTCGCCAGCCACACAGAAGGCATTTACCGAACACCGA
CTGGTCACGAAAACAACATGCTATCAGACATGCACGGGCGCCATCACAAC
TACCTACGCATTTCTCTCACAGAGAGGTGCAACTTGAGATGCGTGTACTG
CATGCCTGAAGACGGCGTCGACTTGCAGCCCCAAACGAAGATGATCAACC
AGCAGGAGATTTTGAGGTTGGCAAGCATGTTCGTGGACGCAGGCGTCGAC
AAGATCCGACTAACTGGGGGCGAGGTGCAACTTGAGATGCGTGTACTGCA
TGCCTGAAGACGGCGTCGACTTGCAGCCCCAAACGAAGATGATCAACCAG
CAGGAGATTTTGAGGTTGGCAAGCATGTTCGTGGACGCAGGCGTCGACAA
GATCCGACTAACTGGGGGCGAGCCACTTGTGCGGAAAGACTTGCCTGATA
TTGTCCGAGCGCTGAGCTCGTTGAACGGAGTGCGCAACGTCGGGGTGACT
ACGAACGGAATCAACCTCAAGCGGAAGATTCCTGCTCTACACGAGGCAGG
CCTCACCCACATCAACCCACTTGTGCGGAAAGACTTGCCTGATATTGTCC
GAGCGCTGAGCTCGTTGAACGGAGTGCGCAACGTCGGGGTGACTACGAAC
GGAATCAACCTCAAGCGGAAGATTCCTGCTCTACACGAGGCAGGCCTCAC
CCACATCAACGTGAGCCTGGATACGCTGCGGCCGGACCGCTTTGCGGCCA
TCACTCGTAGAAATGGCCTCGACACAGTCTTGGCGTCTTTGGATGCAGCG
CTGGCTCATGGGTATGGGGGAAGGTGAGCCTGGATACGCTGCGGCCGGAC
CGCTTTGCGGCCATCACTCGTAGAAATGGCCTCGACACAGTCTTGGCGTC
TTTGGATGCAGCGCTGGCTCATGGGTATGGGGGAAGGCTGAAGATCAACT
GCGTCGTGATGAACGGTGTGAACACGGATGAGCTAGCAGACTTTTTAGAG
TTCACACGGGACCAGGAGCTTGACGTTCGTTTCATCGAATGGATGCCTTT
CGACGACAACCGGTGGAAAGACGCCAAGTTTTTCTCTTACAAGGCTGAAG
ATCAACTGCGTCGTGATGAACGGTGTGAACACGGATGAGCTAGCAGACTT
TTTAGAGTTCACACGGGACCAGGAGCTTGACGTTCGTTTCATCGAATGGA
TGCCTTTCGACGACAACCGGTGGAAAGACGCCAAGTTTTTCTCTTACAAG
TCCATGTTGAACGTGATTCGGGAACGCTACCCCGATCTCGAGAGGACAGT
CGACTCCGCCAACGACACCACCAAGTGGCACAGAGTTCCGGGATACAGGG
GCAGTCCATGTTGAACGTGATTCGGGAACGCTACCCCGATCTCGAGAGGA
CAGTCGACTCCGCCAACGACACCACCAAGTGGCACAGAGTTCCGGGATAC
AGGGGCAGGGTGGGGTTCATCACGTCGATGAGCGAACACTTCTGCGGCAC
GTGTAATCGTCTTCGCATAACATCGGATGGGAACTTGAAGGTCTGCCTTT
TTGGAGACGAAAGCCTCAGCCTTCGCGACGCACTCAGAGGAGGTCTCTCT
GATGCAGAAATATCAGTCCTTGTACGGGCCGCAGTGTTGGGTAAGCGTGC
AGCCCTTGGAGGCCATGGGGACATGTACGGTATTGCGAATGCCAAAAACC
GGCCGATGACTACGATCGGAGGATAAGGTGGGGTTCATCACGTCGATGAG
CGAACACTTCTGCGGCACGTGTAATCGTCTTCGCATAACATCGGATGGGA
ACTTGAAGGTCTGCCTTTTTGGAGACGAAAGCCTCAGCCTTCGCGACGCA
CTCAGAGGAGGTCTCTCTGATGCAGAAATATCAGTCCTTGTACGGGCCGC
AGTGTTGGGTAAGCGTGCAGCCCTTGGAGGCCATGGGGACATGTACGGTA
TTGCGAATGCCAAAAACCGGCCGATGACTACGATCGGAGGATAA
back to top