prot_L-elsbetiae_contig14555.3332.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14555.3332.1
Unique Nameprot_L-elsbetiae_contig14555.3332.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length97
Homology
BLAST of mRNA_L-elsbetiae_contig14555.3332.1 vs. uniprot
Match: D7FQ68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ68_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 1.850e-48
Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 0
Query:    1 LSQSREQKFRVSDATTVALFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKFRLARAGLQDKKETSRKQIKEAKNRSKKIRGTGRRIAKHKAKKAAK 96
            L +   +KFRVSDAT V LFGFRTHFGGGKSTGFCLIYDS+EDMKKFEPK RLARAGLQDKKETSRKQIKEAKNR KKIRGTGRRIAKHKAKKAAK
Sbjct:   40 LGEMIAKKFRVSDATMVTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAAK 135          
BLAST of mRNA_L-elsbetiae_contig14555.3332.1 vs. uniprot
Match: A0A7S2US90_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US90_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.050e-38
Identity = 72/96 (75.00%), Postives = 80/96 (83.33%), Query Frame = 0
Query:    1 LSQSREQKFRVSDATTVALFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKFRLARAGLQDKKETSRKQIKEAKNRSKKIRGTGRRIAKHKAKKAAK 96
            L +   +  +V+D TTV+LFGFRT FGG KSTGFCLIYDS+ED KKFEPKFRL R GL +K ETSRKQIKEAKNR KKIRGTGRRIA+HKAKKA K
Sbjct:   41 LQERLAKMHKVNDTTTVSLFGFRTAFGGNKSTGFCLIYDSVEDAKKFEPKFRLVRLGLAEKTETSRKQIKEAKNRGKKIRGTGRRIARHKAKKANK 136          
BLAST of mRNA_L-elsbetiae_contig14555.3332.1 vs. uniprot
Match: F0YI50_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI50_AURAN)

HSP 1 Score: 124 bits (312), Expect = 9.730e-35
Identity = 65/87 (74.71%), Postives = 74/87 (85.06%), Query Frame = 0
Query:   10 RVSDATTVALFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKFRLARAGLQDKKETSRKQIKEAKNRSKKIRGTGRRIAKHKAKKAAK 96
            +V+D   ++LFGFR  FGGGKSTGFCLIYDS E  KK+EPK+RL R G+ +KKETSRKQIKEAKNR KK+RGTGRRIA HKAKKAAK
Sbjct:   49 KVADTQLISLFGFRNKFGGGKSTGFCLIYDSAEAAKKYEPKYRLIRNGIVEKKETSRKQIKEAKNRKKKVRGTGRRIANHKAKKAAK 135          
BLAST of mRNA_L-elsbetiae_contig14555.3332.1 vs. uniprot
Match: W7U6J8_9STRA (40S ribosomal protein S24 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6J8_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.650e-33
Identity = 67/81 (82.72%), Postives = 71/81 (87.65%), Query Frame = 0
Query:   16 TVALFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKFRLARAGLQDKKETSRKQIKEAKNRSKKIRGTGRRIAKHKAKKAAK 96
            T  LFGFRT FGGGKSTGF LIYD++ED KKFEPK RL RAGL  KKETSRKQIKEAKNR+KKIRGTGRR+AKHKAKKA K
Sbjct:   57 TTFLFGFRTAFGGGKSTGFALIYDTLEDAKKFEPKHRLVRAGLVVKKETSRKQIKEAKNRAKKIRGTGRRLAKHKAKKANK 137          
BLAST of mRNA_L-elsbetiae_contig14555.3332.1 vs. uniprot
Match: A0A8J2WEF7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WEF7_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.040e-33
Identity = 66/92 (71.74%), Postives = 75/92 (81.52%), Query Frame = 0
Query:    9 FRVSDATTVALFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKFRLARAGLQDKKETSRKQIKEAKNRSKK----IRGTGRRIAKHKAKKAAK 96
            ++V+D + ++LFGFR  FGGGKSTGFCLIYDS E  KK+EPK+RL R G  +KKETSRKQIKEAKNR KK    IRGTGRRIA HKAKKAAK
Sbjct:   54 YKVTDKSLISLFGFRNKFGGGKSTGFCLIYDSAESAKKYEPKYRLVRNGFVEKKETSRKQIKEAKNRKKKQIRQIRGTGRRIANHKAKKAAK 145          
BLAST of mRNA_L-elsbetiae_contig14555.3332.1 vs. uniprot
Match: M4BX32_HYAAE (40S ribosomal protein S24 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BX32_HYAAE)

HSP 1 Score: 119 bits (298), Expect = 8.660e-33
Identity = 62/96 (64.58%), Postives = 77/96 (80.21%), Query Frame = 0
Query:    1 LSQSREQKFRVSDATTVALFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKFRLARAGLQDKKETSRKQIKEAKNRSKKIRGTGRRIAKHKAKKAAK 96
            L +   + ++V D+ TV L+GFRT FGGGKS+GF L+YDS+ D K+FEPK+RL R GL +K ETSRKQIKEAKNR+KK+RG GRRIA+HKA KA K
Sbjct:   28 LQEKISKMYKVKDSNTVFLYGFRTQFGGGKSSGFGLVYDSVNDAKRFEPKYRLIRQGLVEKVETSRKQIKEAKNRAKKVRGVGRRIARHKAAKANK 123          
BLAST of mRNA_L-elsbetiae_contig14555.3332.1 vs. uniprot
Match: F0WPH7_9STRA (40S ribosomal protein S24 n=3 Tax=Albugo TaxID=65356 RepID=F0WPH7_9STRA)

HSP 1 Score: 119 bits (299), Expect = 9.200e-33
Identity = 64/96 (66.67%), Postives = 75/96 (78.12%), Query Frame = 0
Query:    1 LSQSREQKFRVSDATTVALFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKFRLARAGLQDKKETSRKQIKEAKNRSKKIRGTGRRIAKHKAKKAAK 96
            L +   + ++V D  TV L+GFRT FGGGKSTGF LIYDS+ D K+FEPK+RL R GL +K E+SRKQIKEAKNR KKIRG GRRIA+HKA KA K
Sbjct:   42 LQEKVGKMYKVKDTNTVVLYGFRTQFGGGKSTGFGLIYDSVNDAKRFEPKYRLIRQGLAEKVESSRKQIKEAKNRKKKIRGVGRRIARHKAAKANK 137          
BLAST of mRNA_L-elsbetiae_contig14555.3332.1 vs. uniprot
Match: D0N827_PHYIT (40S ribosomal protein S24 n=14 Tax=Phytophthora TaxID=4783 RepID=D0N827_PHYIT)

HSP 1 Score: 119 bits (297), Expect = 1.850e-32
Identity = 62/96 (64.58%), Postives = 76/96 (79.17%), Query Frame = 0
Query:    1 LSQSREQKFRVSDATTVALFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKFRLARAGLQDKKETSRKQIKEAKNRSKKIRGTGRRIAKHKAKKAAK 96
            L +   + ++V DA TV L+GFRT FGGGKS+GF L+YD++ D K+FEPK+RL R GL +K ETSRKQIKEAKNR KK+RG GRRIA+HKA KA K
Sbjct:   42 LQEKISKMYKVKDANTVFLYGFRTQFGGGKSSGFGLVYDTVNDAKRFEPKYRLIRQGLVEKVETSRKQIKEAKNRGKKVRGVGRRIARHKAAKANK 137          
BLAST of mRNA_L-elsbetiae_contig14555.3332.1 vs. uniprot
Match: A0A0P5B3P7_9CRUS (40S ribosomal protein S24 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A0P5B3P7_9CRUS)

HSP 1 Score: 119 bits (297), Expect = 1.910e-32
Identity = 67/97 (69.07%), Postives = 76/97 (78.35%), Query Frame = 0
Query:    1 LSQSREQKFRVSDATTVALFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKFRLARAGLQDKKETSRKQIKEAKNRS-KKIRGTGRRIAKHKAKKAAK 96
            L +   + ++V DATTV L+GFRT FGGGKS+GFCLIYDSI D K+FEPK RL R GL DK ETSRKQIKEAKNR+ K  RG GRRIA+HKA KA K
Sbjct:   42 LQEKVAKMYKVKDATTVFLYGFRTAFGGGKSSGFCLIYDSINDAKRFEPKHRLVRQGLADKVETSRKQIKEAKNRALKNPRGVGRRIARHKANKANK 138          
BLAST of mRNA_L-elsbetiae_contig14555.3332.1 vs. uniprot
Match: W4GRV1_9STRA (40S ribosomal protein S24 n=6 Tax=Saprolegniaceae TaxID=4764 RepID=W4GRV1_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.730e-32
Identity = 61/96 (63.54%), Postives = 76/96 (79.17%), Query Frame = 0
Query:    1 LSQSREQKFRVSDATTVALFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPKFRLARAGLQDKKETSRKQIKEAKNRSKKIRGTGRRIAKHKAKKAAK 96
            L +   + ++V+D  TV L+GFRT FGGGKS+GF LIYD++ D KKFEPK+RL R GL +K E SRKQIKE+KNR+KK+RG GRRIA+HKA KA K
Sbjct:   42 LQEKLAKMYKVADTNTVFLYGFRTAFGGGKSSGFALIYDTVNDAKKFEPKYRLVRQGLSEKVEKSRKQIKESKNRAKKVRGVGRRIARHKANKANK 137          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14555.3332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ68_ECTSI1.850e-4888.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2US90_9STRA1.050e-3875.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YI50_AURAN9.730e-3574.71Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
W7U6J8_9STRA1.650e-3382.7240S ribosomal protein S24 n=2 Tax=Monodopsidaceae ... [more]
A0A8J2WEF7_9STRA3.040e-3371.74Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
M4BX32_HYAAE8.660e-3364.5840S ribosomal protein S24 n=1 Tax=Hyaloperonospora... [more]
F0WPH7_9STRA9.200e-3366.6740S ribosomal protein S24 n=3 Tax=Albugo TaxID=653... [more]
D0N827_PHYIT1.850e-3264.5840S ribosomal protein S24 n=14 Tax=Phytophthora Ta... [more]
A0A0P5B3P7_9CRUS1.910e-3269.0740S ribosomal protein S24 n=3 Tax=Eukaryota TaxID=... [more]
W4GRV1_9STRA3.730e-3263.5440S ribosomal protein S24 n=6 Tax=Saprolegniaceae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..75
NoneNo IPR availableGENE3D3.30.70.3370coord: 1..96
e-value: 1.9E-32
score: 113.6
NoneNo IPR availablePRODOMPD006052coord: 1..46
e-value: 2.0E-8
score: 134.0
IPR001976Ribosomal protein S24ePFAMPF01282Ribosomal_S24ecoord: 11..63
e-value: 2.5E-22
score: 78.6
IPR001976Ribosomal protein S24ePANTHERPTHR1049640S RIBOSOMAL PROTEIN S24coord: 10..94
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 13..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14555contigL-elsbetiae_contig14555:1267..2156 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14555.3332.1mRNA_L-elsbetiae_contig14555.3332.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14555 1267..2156 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14555.3332.1 ID=prot_L-elsbetiae_contig14555.3332.1|Name=mRNA_L-elsbetiae_contig14555.3332.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=97bp
LSQSREQKFRVSDATTVALFGFRTHFGGGKSTGFCLIYDSIEDMKKFEPK
FRLARAGLQDKKETSRKQIKEAKNRSKKIRGTGRRIAKHKAKKAAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001976Ribosomal_S24e
IPR012678Ribosomal_L23/L15e_core_dom_sf