mRNA_L-elsbetiae_contig1454.3323.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig1454.3323.1
Unique Name	mRNA_L-elsbetiae_contig1454.3323.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig1454.3323.1 vs. uniprot
Match: D7G3C6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C6_ECTSI)

HSP 1 Score: 661 bits (1705), Expect = 1.670e-236
Identity = 350/364 (96.15%), Postives = 355/364 (97.53%), Query Frame = 1

Query:    4 ASLGQDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKPKTRNIIHERALKFLPNSYKLWHQYLGERRSAVEGKCITDPACQIVVNAHERALIWPPYLEWAKAFGVRETAVRVFRRYLMFDPAHREDYVEYLEAEGQWEEAAKQLGICVNDEDFLSPHVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVVTVRDFTMVFDAYTQFEESVLTAKMRMAEESDXXXXXXXXXXXXXXXXXXVELRLARLEHLLERRPILVSSVLLRQNPHNVNEWQKRVKLFAEDPRKAIICYTEAVKTVDPKKATGKLNKLWMDFAKFYEGHGDVANARVIFEKATLVPYRRV 1095
            +SLGQDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAK KTRNIIHERALKFLPNSYKLW+QYL ERR+AVEGKCITDPACQIVVNAHERALIWPPYLEWAK FGVRETAVRVFRRYLMFDPAHREDYV+YLE EGQWEEAAKQLGICVNDEDFLSP VDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVVTVRDFTMVFDAYTQFEESVLTAKMRMAEESDXXXXXXXXXXXXXXXXX VELRLARLEHLLERRPILVSSVLLRQNPHNVNEWQKRVKLFAEDPRKAIICYTEAVKTVDPKKATGKL+KLWMDFAKFYEGHGDVANARVI EKATLV YR V
Sbjct:   10 SSLGQDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERALIWPPYLEWAKGFGVRETAVRVFRRYLMFDPAHREDYVDYLETEGQWEEAAKQLGICVNDEDFLSPQVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVVTVRDFTMVFDAYTQFEESVLTAKMRMAEESDXXXXXXXXXXXXXXXXX-VELRLARLEHLLERRPILVSSVLLRQNPHNVNEWQKRVKLFAEDPRKAIICYTEAVKTVDPKKATGKLHKLWMDFAKFYEGHGDVANARVILEKATLVAYRNV 372

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BLAST of mRNA_L-elsbetiae_contig1454.3323.1 vs. uniprot
Match: A0A836CA78_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA78_9STRA)

HSP 1 Score: 496 bits (1278), Expect = 3.060e-171
Identity = 261/375 (69.60%), Postives = 298/375 (79.47%), Query Frame = 1

Query:   13 GQDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKPKTRNIIHERALKFLPNSYKLWHQYLGERRSAVEGKCITDPACQIVVNAHERAL---IWPPYLEWAKAFGVRETAVRVFRRYLMFDPAHREDYVEYLEAEGQWEEAAKQLGICVNDEDFLSPH------VDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVVTVRDFTMVFDAYTQFEESVLTAKMRMAEESDXXXXXXXXXXXXXXXXXX---VELRLARLEHLLERRPILVSSVLLRQNPHNVNEWQKRVKLF--AEDPRKAIICYTEAVKTVDPKKATGKLNKLWMDFAKFYEGHGDVANARVIFEKATLVPYRRV 1095
            G++++  L +  D E+E EISR P+RLK+W RYL AK     + RNI+HERALKFLP SYKLWHQYL ER SAVEGKCITDPACQIVVN  ERAL   IWP YLEWAK  GV+ETA+RV+RRYLM+DP HRE YVEYLE +G+WEEAA QL ICVNDE F+SP       VDAIIRSGL+RFTDEVGRLWCKLADYYIRLGQFERARDVYEE I +V+TVRDFTMVFDAY+QFEESVL+AKM++AE+ D          XXXXXXXX   V+LRLARLEHLLERRP+L+SSVLLRQNPHNV+EWQKRVKLF  A  P  A+  Y +AVK + PK A GKL  LW++FAKFYE HGD++NAR +FEKA L  YR V
Sbjct:    8 GEEVQALLADATDFEYETEISRAPFRLKNWVRYLAAKTSTNRRARNILHERALKFLPTSYKLWHQYLTERLSAVEGKCITDPACQIVVNTFERALHDRIWPLYLEWAKGIGVKETAIRVYRRYLMYDPLHREQYVEYLEGKGEWEEAAHQLAICVNDESFISPEGHTRHQVDAIIRSGLTRFTDEVGRLWCKLADYYIRLGQFERARDVYEEGITTVITVRDFTMVFDAYSQFEESVLSAKMQLAEDGDSDGEDAAGTDXXXXXXXXXXDVDLRLARLEHLLERRPLLISSVLLRQNPHNVHEWQKRVKLFVTAGKPADAVRTYADAVKAISPKLAVGKLCNLWIEFAKFYEEHGDMSNARTVFEKALLPTYRNV 382

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BLAST of mRNA_L-elsbetiae_contig1454.3323.1 vs. uniprot
Match: A0A7S2W251_9STRA (Glycine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W251_9STRA)

HSP 1 Score: 414 bits (1064), Expect = 8.050e-134
Identity = 236/432 (54.63%), Postives = 290/432 (67.13%), Query Frame = 1

Query:   16 QDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKPKTRNIIHERALKFLPNSYKLWHQYLGERRSAVEGKCITDPACQIVVNAHERAL--------------------------------------------IWPPYLEWAKAFGVRETAVRVFRRYLMFDPAHREDYVEYLEAEGQWEEAAKQLGICVNDEDFLSP--------------------------HVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVVTVRDFTMVFDAYTQFEESVLTAKMRMAEESDXXXXXXXXXXXXXXXXXXVELRLARLEHLLERRPILVSSVLLRQNPHNVNEWQKRVKLF--AEDPRKAIICYTEAVKTVDPKKATGKLNKLWMDFAKFYEGHGDVANARVIFEKATLVPYRRV 1095
            +DI   LE+E+ I +EEEISRNP+ L SW RYL  K+ A+P+ R  + ERAL+ LP SYKLW QYL ER++ ++GK +TD    I+VN +ERAL                                            IW  YL+W + F V+ETAV+++RRYLM+DP HRE++V+YL + G ++EAA+QL  CVND++F+SP                           VDAIIRSGL+RFTDEVGRLWCKLADYYIRLGQFERARDV+EE INSV+TVRDF+++FD Y QFEESVL+AKM  A+E  XXXXXXXXXX        VELRLARLEH++ERRP+L+SSVLLRQNPHNV EW KRVKL+  AED R  I+CYTEAVKTV P +ATGK + LW+ FAKFYE HGDVA+AR I +KA  V Y+ V
Sbjct:    1 EDITRILEDEEAIRYEEEISRNPFILNSWLRYLDFKKRARPRERFFLFERALRCLPRSYKLWRQYLQERQAQIKGKSVTDKRNTILVNTYERALVHLHKMPRIWLDYCELLMNLQRGTRTRRTFDRALQALPVTQHDRIWSLYLQWVQDFAVKETAVKIYRRYLMYDPQHREEFVDYLVSVGHYDEAAQQLAECVNDDNFVSPGGHSKHQMWMRLCDMCAKHPEEVGTLKVDAIIRSGLARFTDEVGRLWCKLADYYIRLGQFERARDVFEEGINSVMTVRDFSLIFDTYAQFEESVLSAKMN-ADEEXXXXXXXXXXXDIDVDGNDVELRLARLEHIMERRPLLLSSVLLRQNPHNVPEWHKRVKLYEDAEDLRNVIVCYTEAVKTVVPSQATGKPHTLWLAFAKFYEDHGDVASARTILQKAVEVAYKTV 431

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BLAST of mRNA_L-elsbetiae_contig1454.3323.1 vs. uniprot
Match: K8YQA2_NANGC (Pre-mRNA-splicing factor SYF1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YQA2_NANGC)

HSP 1 Score: 407 bits (1045), Expect = 1.480e-130
Identity = 227/436 (52.06%), Postives = 275/436 (63.07%), Query Frame = 1

Query:   10 LGQDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKPKTRNIIHERALKFLPNSYKLWHQYLGERRSAVEGKC-ITDPACQIVVNAHERAL--------------------------------------------IWPPYLEWAKAFGVRETAVRVFRRYLMFDPAHREDYVEYLEAEGQWEEAAKQLGICVNDEDFLSPH---------------------------VDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVVTVRDFTMVFDAYTQFEESVLTAKMRMAEESDXXXXXXXXXXXXXXXXXXVELRLARLEHLLERRPILVSSVLLRQNPHNVNEWQKRVKLFA--EDPRKAIICYTEAVKTVDPKKATGKLNKLWMDFAKFYEGHGDVANARVIFEKATLVPYRRV 1095
            +  +I+  LE+E+D EFEEEI+RNP+ LKSW RYL AK  AKP  R +I+ERALKFLP SYKLW  YL ER+  V+G+  ++ P  QI++N  ERAL                                            IW  YL WA+  GV+ETA+RVFRRYL +DP+ RE YV+++E  G+ EEAA  L ICVND+ F SP                            VDAIIRSGL+RFTDE G+LWCKLADYYIR GQFERARDVYEEA+++V+TVRDFTMVFDAY+Q EES+LTA++ M  E +                   +LRLARLE L+ERRPIL+SSVLLRQNPHNV+EW KR KLF    DP K I+C+TEAVKTVDPKKA GKL  LW  FAK+YE H D+ NARV+  KATLV ++ V
Sbjct:   15 VSDEIRALLEDEQDAEFEEEIARNPFSLKSWLRYLNAKTQAKPVKRYLIYERALKFLPGSYKLWWAYLQERKEQVDGRVPVSHPRYQILLNTFERALVHLSRMPRVWLDYLHTLVDMKKATKTRRAFDAALQSLPITQHERIWSLYLPWAQNLGVKETAIRVFRRYLKYDPSQRESYVDFMEKLGEMEEAAVHLAICVNDDAFFSPKGSSKHALWMRLCDMCARHPTAISRRLKVDAIIRSGLARFTDETGKLWCKLADYYIRQGQFERARDVYEEALSTVLTVRDFTMVFDAYSQCEESLLTARVAMLAEEEEPEDETDDDLDVEGDD--TDLRLARLEDLMERRPILLSSVLLRQNPHNVHEWHKRAKLFQAQNDPHKVIVCFTEAVKTVDPKKAFGKLYSLWTAFAKYYEEHDDIDNARVVLNKATLVNFKGV 448

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BLAST of mRNA_L-elsbetiae_contig1454.3323.1 vs. uniprot
Match: A0A401Q2H7_SCYTO (Uncharacterized protein n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401Q2H7_SCYTO)

HSP 1 Score: 362 bits (928), Expect = 2.890e-119
Identity = 203/427 (47.54%), Postives = 255/427 (59.72%), Query Frame = 1

Query:   43 EKDIEFEEEISRNPYRLKSWWRYLLAKEGAKPKTRNIIHERALKFLPNSYKLWHQYLGERRSAVEGKCITDPACQIVVNAHERAL--------------------------------------------IWPPYLEWAKAFGVRETAVRVFRRYLMFDPAHREDYVEYLEAEGQWEEAAKQLGICVNDEDFLSP--------------------------HVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVVTVRDFTMVFDAYTQFEESVLTAKMR------MAEESDXXXXXXXXXXXXXXXXXXVELRLARLEHLLERRPILVSSVLLRQNPHNVNEWQKRVKLFAEDPRKAIICYTEAVKTVDPKKATGKLNKLWMDFAKFYEGHGDVANARVIFEKATLVPYRRV 1095
            E D+ +EEEI RNPY +K W RY+  K+ A     N+I+ERALK LP SYKLW+ YL +RR  V+GKCITDPA + V N HERAL                                            IWP YL + + F + ETA+RV+RRYL   P + E+Y+EYL +  + +EAA +L   VNDE F+S                           +V AIIR GL+RFTD++G+LWC LADYYIR G FE+ARDVYEEAI +V+TVRDFT VFD+Y QFEES++ AKM        AEE D                  +ELRLAR E L+ RRP+L++SVLLRQNPHNV+EW KRVKL+   PR+ I  YTE+V+TVDP KATGK + LW+ FAKFYE +G + +AR IFEKAT V ++ V
Sbjct:   14 EDDLPYEEEIIRNPYSVKCWIRYIEYKQSAPKHVVNMIYERALKELPGSYKLWYNYLKQRRKQVKGKCITDPAFEEVNNCHERALVFMHKMPRIWLDYCQFQVDQCKITRTRRTFDRALRALPVTQHYRIWPVYLRFVRLFPLSETAIRVYRRYLKLSPENAEEYIEYLHSIDRLDEAAVRLAAIVNDESFVSKEGKSNYQLWHELCRLISTNPDKVKSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVMTVRDFTQVFDSYAQFEESMIAAKMETTAEMGQAEEDDID----------------LELRLARFEQLINRRPLLLNSVLLRQNPHNVHEWHKRVKLYEGKPREIISTYTESVQTVDPLKATGKPHSLWVSFAKFYEENGQIQDARTIFEKATKVNFKHV 424

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BLAST of mRNA_L-elsbetiae_contig1454.3323.1 vs. uniprot
Match: A0A673G278_9TELE (XPA binding protein 2 n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673G278_9TELE)

HSP 1 Score: 358 bits (920), Expect = 2.280e-117
Identity = 200/427 (46.84%), Postives = 255/427 (59.72%), Query Frame = 1

Query:   49 DIEFEEEISRNPYRLKSWWRYLLAKEGAKPKTRNIIHERALKFLPNSYKLWHQYLGERRSAVEGKCITDPACQIVVNAHERAL--------------------------------------------IWPPYLEWAKAFGVRETAVRVFRRYLMFDPAHREDYVEYLEAEGQWEEAAKQLGICVNDEDFLSPH--------------------------VDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVVTVRDFTMVFDAYTQFEESVLTAKMRMAEESDXXXXXXXXXXXXXXXXXXVELRLARLEHLLERRPILVSSVLLRQNPHNVNEWQKRVKLFAEDPRKAIICYTEAVKTVDPKKATGKLNKLWMDFAKFYEGHGDVANARVIFEKATLVPYRRV---CCCWC 1110
            D+ +EEEI RNPY +K W RY+  K+ A+    N+I+ERALK LP SYKLW+ YL ERR  V+GKC+TDPA + V N HERAL                                            IWP YL +A+   + ETA+RV+RRYL   P + E+Y++YL + G+ +EAA +L   VNDE+F+S                            V AIIR GL+RFTD++G+LWC LADYYIR G FE+ARDVYEEAI +VVTVRDFT VFD++ QFEES++ AKM    E                    +ELRLAR E L+ RRP+L++SVLLRQNPHNV+EW KRVKL+   PR+ I  YTEAV+T+DP KATGK + LW+ FA+FYE +  + +AR IFEKAT V Y++V      WC
Sbjct:   16 DLPYEEEIIRNPYSVKCWMRYIEHKQNAQKSVLNMIYERALKELPGSYKLWYNYLRERRKQVKGKCVTDPAYEEVNNCHERALVFMHKMPRIWIDYCQLMVSQCKITRSRRTFDRALRALPITQHPRIWPLYLRFARNLPLPETAIRVYRRYLKLSPENAEEYIDYLRSVGRLDEAAIRLAAVVNDENFVSKEGKSNYQLWHELCDLISQNPDKVTSLKVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSFAQFEESMIAAKMETTSE----------LGQDEEDDIDLELRLARFESLITRRPLLLNSVLLRQNPHNVHEWHKRVKLYEGQPRQIINTYTEAVQTIDPMKATGKPHTLWVSFARFYEDNEQLDDARTIFEKATKVNYKQVDDLAAVWC 432

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BLAST of mRNA_L-elsbetiae_contig1454.3323.1 vs. uniprot
Match: A0A8C1DYQ7_CYPCA (XPA binding protein 2 n=3 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1DYQ7_CYPCA)

HSP 1 Score: 356 bits (914), Expect = 2.630e-116
Identity = 199/427 (46.60%), Postives = 255/427 (59.72%), Query Frame = 1

Query:   49 DIEFEEEISRNPYRLKSWWRYLLAKEGAKPKTRNIIHERALKFLPNSYKLWHQYLGERRSAVEGKCITDPACQIVVNAHERAL--------------------------------------------IWPPYLEWAKAFGVRETAVRVFRRYLMFDPAHREDYVEYLEAEGQWEEAAKQLGICVNDEDFLSP--------------------------HVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVVTVRDFTMVFDAYTQFEESVLTAKMRMAEESDXXXXXXXXXXXXXXXXXXVELRLARLEHLLERRPILVSSVLLRQNPHNVNEWQKRVKLFAEDPRKAIICYTEAVKTVDPKKATGKLNKLWMDFAKFYEGHGDVANARVIFEKATLVPYRRV---CCCWC 1110
            D+ +EEEI RNPY +K W RY+  K+ A+    N+I+ERALK LP SYKLW+ YL ERR  V+GKC+TDPA + V N HERAL                                            IWP YL +A+   + ETA+RV+RRYL   P + E+Y++YL + G+ +EAA +L   VNDE+ +S                           +V AIIR GL+RFTD++G+LWC LADYYIR G FE+ARDVYEEAI +VVTVRDFT VFD+Y QFEES++ AKM    E                    +ELRLAR E L+ RRP+L++SVLLRQNPHNV+EW KRVKL+   PR+ I  YTEAV+T+DP KATG+ + LW+ FA+FYE +  + +AR IFEKAT V Y++V      WC
Sbjct:   19 DLPYEEEIIRNPYSVKCWMRYIEHKQNAQKSVLNMIYERALKELPGSYKLWYNYLRERRKQVKGKCVTDPAYEEVNNCHERALVFMHKMPRVWIDYCQFMVSQCKITRSRRTFDRALRALPITQHPRIWPLYLRFARNLPLPETAIRVYRRYLKLSPENAEEYIDYLRSVGRLDEAAIRLAAVVNDENLVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSYAQFEESMIAAKMETTSE----------LGQDEEGDIDLELRLARFELLITRRPLLLNSVLLRQNPHNVHEWHKRVKLYEGQPRQIINTYTEAVQTIDPMKATGRPHTLWVSFARFYEDNEQLDDARTIFEKATKVNYKQVDDLAAVWC 435

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BLAST of mRNA_L-elsbetiae_contig1454.3323.1 vs. uniprot
Match: K7FDD3_PELSI (XPA binding protein 2 n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7FDD3_PELSI)

HSP 1 Score: 357 bits (916), Expect = 1.990e-115
Identity = 195/421 (46.32%), Postives = 256/421 (60.81%), Query Frame = 1

Query:   43 EKDIEFEEEISRNPYRLKSWWRYLLAKEGAKPKTRNIIHERALKFLPNSYKLWHQYLGERRSAVEGKCITDPACQIVVNAHERAL--------------------------------------------IWPPYLEWAKAFGVRETAVRVFRRYLMFDPAHREDYVEYLEAEGQWEEAAKQLGICVNDEDFLSP--------------------------HVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVVTVRDFTMVFDAYTQFEESVLTAKMRMAEESDXXXXXXXXXXXXXXXXXXVELRLARLEHLLERRPILVSSVLLRQNPHNVNEWQKRVKLFAEDPRKAIICYTEAVKTVDPKKATGKLNKLWMDFAKFYEGHGDVANARVIFEKATLVPYRRV 1095
            E+D+++EEEI RNP+ +K W RY+  K+ A  +  N+I+ERALK LP SYKLW+ YL +RR  V+ +C+TDP  + V N HERAL                                            IWP YL++ + + + ETAVRV+RRYL   P + E+Y+EYL +  + +EAA +L + VNDE F+S                           +V AIIR GL+RFTD++G+LWC LADYYIR G FE+ARDVYEEAI +V+TVRDFT VFD+Y QFEES++ AKM    E                    +ELRLAR E L+ RRP+L++SVLLRQNPHNV+EW KRVKL+   PR+ I  YTEAV+TVDP KATGK + LW+ FA+FYE +G + +AR IFEKAT V +++V
Sbjct:   83 EEDLQYEEEILRNPFSVKCWIRYIEFKQNAPRQVLNLIYERALKELPGSYKLWYNYLKQRRKQVKNRCVTDPGYEEVNNCHERALVFMHKMPRIWLDYCQFLMDQCRITRTRRTFDRALRALPITQHHRIWPLYLKFVRLYPLPETAVRVYRRYLKLSPENAEEYIEYLRSIDRLDEAALRLAVIVNDERFVSKEGKSNYQLWHELCDLISQNPDKVKSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVMTVRDFTQVFDSYAQFEESMIAAKMETTSE----------LGQEEEDDVDLELRLARFEQLIARRPLLLNSVLLRQNPHNVHEWHKRVKLYEGKPREIINTYTEAVQTVDPFKATGKTHTLWVSFARFYEDNGQIEDARTIFEKATKVNFKQV 493

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BLAST of mRNA_L-elsbetiae_contig1454.3323.1 vs. uniprot
Match: A0A672MZQ1_SINGR (XPA binding protein 2 n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672MZQ1_SINGR)

HSP 1 Score: 357 bits (917), Expect = 2.600e-115
Identity = 200/432 (46.30%), Postives = 257/432 (59.49%), Query Frame = 1

Query:   34 LENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKPKTRNIIHERALKFLPNSYKLWHQYLGERRSAVEGKCITDPACQIVVNAHERAL--------------------------------------------IWPPYLEWAKAFGVRETAVRVFRRYLMFDPAHREDYVEYLEAEGQWEEAAKQLGICVNDEDFLSPH--------------------------VDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVVTVRDFTMVFDAYTQFEESVLTAKMRMAEESDXXXXXXXXXXXXXXXXXXVELRLARLEHLLERRPILVSSVLLRQNPHNVNEWQKRVKLFAEDPRKAIICYTEAVKTVDPKKATGKLNKLWMDFAKFYEGHGDVANARVIFEKATLVPYRRV---CCCWC 1110
            L+ + D+ +EEEI RNPY +K W RY+  K+ A+    N+I+ERALK LP SYKLW+ YL ERR  V+GKC+TDPA + V N HERAL                                            IWP YL +A+   + ETA+RV+RRYL   P + E+Y++YL + G+ +EAA +L   VNDE+F+S                            V AIIR GL+RFTD++G+LWC LADYYIR G FE+ARDVYEEAI +VVTVRDFT VFD++ QFEES++ AKM    E                    +ELRLAR E L+ RRP+L++SVLLRQNPHNV+EW KRVKL+   PR+ I  YTEAV+T+D  KATGK + LW+ FA+FYE +  + +AR IFEKAT V Y++V      WC
Sbjct:    4 LQEDDDLPYEEEIIRNPYSVKCWMRYIEHKQNAQKSVLNMIYERALKELPGSYKLWYNYLRERRKQVKGKCVTDPAYEEVNNCHERALVFMHKMPRIWIDYCQLMVSQCKITRSRRTFDRALRALPITQHPRIWPLYLRFARNLPLPETAIRVYRRYLKLSPENAEEYIDYLRSVGRLDEAAIRLAAVVNDENFVSKEGKSNYQLWHELCDLISQNPDKVTSLKVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAILTVVTVRDFTQVFDSFAQFEESMIAAKMENTSE----------LGQDEEDDIDLELRLARFESLITRRPLLLNSVLLRQNPHNVHEWHKRVKLYEGQPRQIINTYTEAVQTIDSMKATGKPHSLWVSFARFYEDNEQLDDARTIFEKATKVNYKQVDDLAAVWC 425

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BLAST of mRNA_L-elsbetiae_contig1454.3323.1 vs. uniprot
Match: A0A4W4H3V3_ELEEL (XPA binding protein 2 n=7 Tax=Clupeocephala TaxID=186625 RepID=A0A4W4H3V3_ELEEL)

HSP 1 Score: 363 bits (933), Expect = 3.200e-115
Identity = 203/433 (46.88%), Postives = 258/433 (59.58%), Query Frame = 1

Query:   31 FLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKPKTRNIIHERALKFLPNSYKLWHQYLGERRSAVEGKCITDPACQIVVNAHERAL--------------------------------------------IWPPYLEWAKAFGVRETAVRVFRRYLMFDPAHREDYVEYLEAEGQWEEAAKQLGICVNDEDFLSP--------------------------HVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFERARDVYEEAINSVVTVRDFTMVFDAYTQFEESVLTAKMRMAEESDXXXXXXXXXXXXXXXXXXVELRLARLEHLLERRPILVSSVLLRQNPHNVNEWQKRVKLFAEDPRKAIICYTEAVKTVDPKKATGKLNKLWMDFAKFYEGHGDVANARVIFEKATLVPYRRV---CCCWC 1110
            F   E D+ +EEEI RNPY +K W RY+  K+       N+I+ERALK LP SYKLW+ YL ERR  V+GKC+TDPA + + N HERAL                                            IWP YL +A+   + ETA+RV+RRYL   P + E+Y++YL + G+ +EAA +LG  VNDE+F+S                           +V AIIR GL+RFTD++G+LWC LADYYIR G FE+ARDVYEEAI +VVTVRDFT VFD+Y QFEES++ AKM    E                    +ELRLAR E L+ RRP+L++SVLLRQNPHNV+EW KRVKL+  +PR+ I  YTEAV+TVDP KATGK + LW+ FA+FYE +  + +AR IFEKAT V Y++V      WC
Sbjct:   20 FFCEEDDLPYEEEIIRNPYSVKCWMRYIEHKQNGPKSVLNMIYERALKELPGSYKLWYNYLRERRKQVKGKCVTDPAYEEINNCHERALVFMHKMPRIWLDYCQFMVSQRKITRSRRTFDRALRALPITQHSRIWPLYLTFARNLPLPETAIRVYRRYLKLSPENAEEYIDYLRSVGRLDEAAVRLGAVVNDENFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVVTVRDFTQVFDSYAQFEESMIAAKMETTSEMGNDEDDDID----------LELRLARFEQLITRRPLLLNSVLLRQNPHNVHEWHKRVKLYEGNPRQIINTYTEAVQTVDPVKATGKPHSLWVAFARFYEDNDQLDDARTIFEKATKVHYKQVDDLAAVWC 442

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1454.3323.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1454.3323.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G3C6_ECTSI	1.670e-236	96.15	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A836CA78_9STRA	3.060e-171	69.60	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2W251_9STRA	8.050e-134	54.63	Glycine--tRNA ligase n=1 Tax=Rhizochromulina marin...	[more]
K8YQA2_NANGC	1.480e-130	52.06	Pre-mRNA-splicing factor SYF1 n=3 Tax=Monodopsidac...	[more]
A0A401Q2H7_SCYTO	2.890e-119	47.54	Uncharacterized protein n=1 Tax=Scyliorhinus toraz...	[more]
A0A673G278_9TELE	2.280e-117	46.84	XPA binding protein 2 n=1 Tax=Sinocyclocheilus rhi...	[more]
A0A8C1DYQ7_CYPCA	2.630e-116	46.60	XPA binding protein 2 n=3 Tax=Cyprinus carpio TaxI...	[more]
K7FDD3_PELSI	1.990e-115	46.32	XPA binding protein 2 n=1 Tax=Pelodiscus sinensis ...	[more]
A0A672MZQ1_SINGR	2.600e-115	46.30	XPA binding protein 2 n=1 Tax=Sinocyclocheilus gra...	[more]
A0A4W4H3V3_ELEEL	3.200e-115	46.88	XPA binding protein 2 n=7 Tax=Clupeocephala TaxID=...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1454	contig	L-elsbetiae_contig1454:12257..25366 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	664.5
Seed ortholog evalue	3e-188
Seed eggNOG ortholog	2880.D7G3C6
KEGG ko	ko:K12867
KEGG Pathway	ko03040,map03040
KEGG Module	M00355
Hectar predicted targeting category	other localisation
GOs	GO:0000349,GO:0000375,GO:0000377,GO:0000393,GO:0000398,GO:0000974,GO:0001701,GO:0001824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009790,GO:0009792,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0018130,GO:0019438,GO:0022607,GO:0022613,GO:0022618,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048856,GO:0050896,GO:0051716,GO:0065003,GO:0071007,GO:0071010,GO:0071012,GO:0071013,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990904
EggNOG free text desc.	generation of catalytic spliceosome for first transesterification step
EggNOG OGs	KOG2047@1,KOG2047@2759
COG Functional cat.	Z
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko00002,ko03019,ko03041
Exons	9
Model size	1110
Cds size	1110
Stop	0
Start	1

Relationships

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1454.3323.1	prot_L-elsbetiae_contig1454.3323.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig1454 12257..25366 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig1454:12257..25366+
coding sequence from alignment at L-elsbetiae_contig1454:12257..25366+

protein sequence of mRNA_L-elsbetiae_contig1454.3323.1

>prot_L-elsbetiae_contig1454.3323.1 ID=prot_L-elsbetiae_contig1454.3323.1|Name=mRNA_L-elsbetiae_contig1454.3323.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=370bp
MASLGQDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKPKTRN
IIHERALKFLPNSYKLWHQYLGERRSAVEGKCITDPACQIVVNAHERALI
WPPYLEWAKAFGVRETAVRVFRRYLMFDPAHREDYVEYLEAEGQWEEAAK
QLGICVNDEDFLSPHVDAIIRSGLSRFTDEVGRLWCKLADYYIRLGQFER
ARDVYEEAINSVVTVRDFTMVFDAYTQFEESVLTAKMRMAEESDDDDSES
DGLGADLDEDGDVELRLARLEHLLERRPILVSSVLLRQNPHNVNEWQKRV
KLFAEDPRKAIICYTEAVKTVDPKKATGKLNKLWMDFAKFYEGHGDVANA
RVIFEKATLVPYRRVCCCWC

mRNA from alignment at L-elsbetiae_contig1454:12257..25366+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig1454.3323.1 ID=mRNA_L-elsbetiae_contig1454.3323.1|Name=mRNA_L-elsbetiae_contig1454.3323.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=13110bp|location=Sequence derived from alignment at L-elsbetiae_contig1454:12257..25366+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTTCCCTGGGCCAGGACATCAAGGAGTTCCTGGAGAACGAGAAAGA
CATCGAGTTCGAGGAAGAGATCTCTCGCAATCCTTACCGACTCAAGTCGT
GGTGGAGGTACCTGCTGGCGAAGGAGGGCGCCAAGCCCAAGACGCGCAAC
ATCATCCACGAGCGGGCGCTCAAGTTCCTCCCCAACAGGTCTGTCCGTGC
CCCGCCCGGATGATGTTTTTTGGTGGGGGTGTTGTTGCGTGGCAGGTTCA
AGCTACACACGCTCGTCGTGGGCGTGGGGGTGGGCGAGGTAGATGAAAGC
AGCCTCCATTTTGTAGCACGATTAACCGCTGTGCTTGTGTACAACCTACA
GCAGCAGTAGCACACAGCAGGCAGCAGCAGCATACGTTGCAGCGCATGGT
TCAGAGTCCCAATCCCCCCCAAGGATCCGAACCCGCGGCATCGATACATC
CGCATGTACAATAGTTGTGTGCAGCCCGCAGCACGAAAGGAGACGTGTAG
GCTTAGTATATACACGTACATACGAAAACATGAGGAGTCGTGTTCTGTCT
CCGACACCGCCAGTCACATCACGCTCACGGGGGGGAGAACGGAGACACGC
TTGAGGACGGGTTTTGGTCATTCCCGCCTGCATATTCTGCATCAGCACAA
TACTGCCGTACCTCTTCCGCAGCCAGCTTCAATTTTAAAAAGGATTCTAC
CAGCAGTATGTGTTGGCACCCGAGTAGTCTGGCCCCCTTCCCACACTCCG
TACGATCCGATGTGGTGACAAGCAGAGAGGCGGGGAAACCTCGAGTTGCT
TCGGCACCCTACCGTAGATGACACAAGATACCACCCCCCCCGCCCTGGAC
AGATTTTCAGCGTTAGCCTTGGCAGCTTTTACTGTAAAAAATCATGCGGG
ATAAACTATGGAAACGGCTAATGGGGATCGGTTTGGGGGTTAGGGTTAGT
GTTCGGGTTGGGTTACGGAACCCCTGTCTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTCCTTCCCATTTATTTTGGCGACAGCAGTCCCCCCAAG
TGGAGACGTGTACTACACCTTGCGGTGTGACTATTATTTCCTATTGTATG
ACAGGAATTTTTCGCGAAGGGGGCCCGATTTTTCAAAGCTCGATTACTCC
GTAACGAAGAGGGTGCCAGCACCAAACGACACATTTTCGGACAGGACTCG
ACTAGATACTTCCAACGCCATCACACCATCCCCTTTCGGCACTGGCTCTC
TTCCTGCTGGGGACGAATCGAGTTTTGAAAGTATGTTGAAGGGGGGGGGC
TGGTATCTTGTATCATCTACGGTAACCCGGCCAGCCAGGGCTTTGGCGGT
ATTGACTGGGGCCTACTCCCGACATAGTAACGCCGTGCGTCAAAAGCCTT
GTAGCACGATTGCCAGGAGTCATGTCAAAACATCAACCCAGTTGATGCTA
CAGTAGCAGTTGTAGGTTCGTCACGAGTGAGGGAAAAGGGACTACATTAT
CATATACAAGCAGGAAGTAATTCCCACCTCCAACGGAGGCTCTGCAGTCT
TCCACAGCAGTAGGCGACACCGTACATGGCTTACGTCGCGGCAATCGTAA
ATCGCACACGCCTTTTTATTTTAGGTCACCCCACCGCCGCCACCACCACC
GCCCTTCCGTCTGGGGGCTCCGTGTGTACATGTTTATATCATGAATTCAC
CGCATGCATGCACGTTCGTCCCCCGCCTTTGATCCCCCCAACGAACCCAC
CCGCCCTTCCCTGCCCTGCCCTCTGCCGCGACAGCTACAAGCTGTGGCAC
CAGTACCTGGGTGAGAGGAGATCGGCAGTGGAGGGAAAGTGCATCACCGA
CCCGGCCTGCCAGATCGTGGTTAACGCCCATGAGCGAGCGCTGGTGAGAG
AGAGAGAGAGAGAGGGAGAGAGAGATAGTAAGACGAGAGGGTGGGAAGAG
AGAGGGCTAAGCGCCGTGGGCGAGGGGCGGGAGGGAGGGAGGCGGGGATG
GGGAGGGCGGTAGGAGCTTAGGCCGGGTCTTATGGGGACGAAATATGGCC
ACGGAACGGAATTTTTGTTCTGGTCCGTGGCTCCCCCTTTGGAGGGGGGG
ATGAGTAGGCGAGACAACGAACGGAATTTTTTGGGTCGCGAACCAAACCA
CGGCAACACTGCTGTCTCAGGCCATAGCTCACGGATTGACACGAGACCTT
CTCGGCTGTACGCTCCATACCTGTGGGAGTCTTGAGATATTTTTTTCGTG
GTCATAGGCTTCGTGTGGCTCGAGAAGTAGCCTTCGCGCGATCGAAAATC
ACATTTCGTGTGACCAATCCGTCCGCGAAATAACACGGTTTTTGGGGGTA
TATTTCGTGTGACGTTTTGCCAGACGGATTTGTGTTTTGTTCACAACATC
AACCAGTCCTCGCCACAAAAAAATCGCCTAACACCAAGGGCTAGCTGCGA
AGAATCCTACGAGCATGGAGCGTAGGCCTGATTTTTTTTGTGGCAATCTG
TCAGCTATGGCCGGAGAGGTCATGGGTGGTGTGGTGACGGTAGGGCGTGT
CTCCATTTCGTGGGGGGTTCGAAGCCCCAACACCCCCCCTTTCGGTTCAG
GGGCCCGCCCCAGGACAAAAATTCCGTTCCGTGGAAAATTTGGCCCCCGT
AAGAAGGTCTTAGGAGCTCTCCCTTGAGAGAGAGAGAGGGGGGGGGGGTC
TCTGGAGGGAAAGGGCGACGTCAAAAGTCGGAAAATACCTTGTGCTTCCA
TTGCGCCACTACCCGCCACCGCCAAGACTAGGTCCCTTGGTTTGACAAGG
ATGCCCGCCCCGCGTGTGTTGTGGGTAGCGCCCTGGCTTTCTTCGCCTCG
ACCGTTTTGCGGCATGCCATCTAAATAGCGCCTTTGATACTTTAGACGGA
GTACATGCTTATGCTTGCCCTTCGAAAAACTCGGAAATCTATATATGGCA
AGCGCGACAACCCCCCGCGCCCCCACGTGCCCTGTCCCAGGTTCACCTCC
ACAAGATGCCCCGACTGTGGGTCGACTACCTCGCGTTTGTGGTCCGGCTC
GGCCTGGGGACGAAGGCTCGCCGGACGTTCGACCGCGCCTTGCAGGCCCT
GCCCATCACGCAGCACGACAAGGTGGGGGTTCAGTAGTGTCATGCAAAAT
ATTTTTTTGATATCAAGCCAAAAGCGTGCTTTGGGGAATGGTTCGTGAAA
AACAGTTTTTTGACATCAAGCCAAAAGCGTGCTTTTGGGTAATGGTTTTA
TGCTTTTTTCTAAGGCTGGTAACCCAAAGCGTGCGTGCTTTGGGTGTGTG
TAAGCATGTGGATTACGGTTTTATGGTGTGTTTTACGGTTGGTCGCACGA
TGATGATGATGATGATGATGATGGCTGCCAAAGGCTAAGTATAATGTGGG
GCGTAGGTTTCGGGGATGTGGGGCGAGCGAAATCTCGCCGCGGGTGTTCG
TTCGACGGCGCGGGCCTTGCAGACATCTCCTGCAGGCGCCTCTTGCTCCC
GTCACGCAGCGCGACCCCGAGACCTAGATTACATACAACATGCCCTTTTT
TCGTGGTGTTGTGGCACGTTTTTGGTGATGCTTATTGGGGTGATCGGTCC
TTTGATCATTCGACGGTGCGGGGGCCTTGCAGACATCTCCTGCAGGCGCC
TCTTGCTCCCGTCACGCAGCGCGACCCCCAAGACCTATGTACAAGATACA
TAGTAGGTATACACACGCTTCTTTGAGCGTGCACCCTTTTATTTGGTGGT
TCTGTGTAGTAGAAGTATGTTGTTTTGTGGCACGTTTTTGGTGATGCTTG
TATGTTCGGATGATCGGTCCTTTGATCAACCTGCGGCTGCTGCTGCTGCT
ACTTTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCAAAGTAC
CTTTAAATGTCGGCACGGCCAGGAAATTACTTTACTTCGTAGAGCTACAG
GATTGTTTCCTTCCTGCAGCAGCTTGTCTGTCCTCGACCTTTACTTCTTT
AATTCGGCGAAGAATTAATCGTCGAGCCCCTATGTAGTCCTTGGCGATCA
TGTTTGCGGTGAATTTTTCGGTCGTTTTTGTTGTTGTTTTTTGTTCTGCT
GGTTTACGCAGAGGACTGGTCGTGCACAGGTAAATACTCCGAAAAAAAGA
AGACACAGAAGTACATACATGGGCCGCCGTGGGCGGCTGGAAGGTTCGTG
TCAGATATTTCTGTAAGTGCACCCCACCCCAACCCCAGCCCCCCAGCCAG
CTCCATCTGTCCCCATCCCCATTAACCTTCGCCCTGATCCTTAATCCTTG
GTCCTTGTCATAATCCTGAAGATATGGCCGCCGTACCTGGAATGGGCTAA
GGCGTTCGGCGTGAGGGAGACGGCGGTGCGCGTTTTCAGGTAACGCCGAT
TGTTGTCGTTGTTGTTGTTGTTGTTGTTGTTGCTGCTGCCGTGTTGTGTT
GCTGTTTTGCGCGTTCTAGAGGTGCTTTCTCGAAAAGGCGTCGGGGATTC
GTCCGGCGTGTGTAGATAGATGCGTTGGAGCGAGCCGGCCGATTTCTTCG
GTCTTCCGGCGACACCCTCGGTTGGGGCGTCACAGCAGTGAGCACGCTGC
TTGGGTGCAATCTCTCTGTCTCTGTCTCTGTATCTTGTCTCTGTCTCTGT
CTCTGTCTCTGTATCTTGTCTCTGTCTCTGTCTCTGTCTCCGTCTCTGCC
TCTGCCTCTGCCTCTGTCTCTGCCTCTGTCTCTGGCTCTGCCTCTGTATC
TTGCCTCTGTCTCTGTCTCTGTCTCTGCCTCTTTTCTTCGGTTTGTTATC
TCTCTCTGCCGACGCACGTAGTCCGCCTCTCTCCCCTGCTTTGATTATTT
CCGGTCGAATCATATCCACGTGCCCTTGTCACCCCGAGTTGTCGTCACCA
TGCCATGTGCTTGGTTCGGGGCCGCTGACGCACGTTCTCGCGCCTCTTCC
TCCCTTTTCTGAGAAATTTCTGGGCGTTTTTTTTTTTCTTGTGGTGGTGT
TGTCCTTCCTGCCTGCGCAAAAAAGGCGCTATCTCATGTTCGACCCAGCC
CACCGCGAGGACTACGTGGAGTACCTGGAGGCGGAGGGGCAGTGGGAGGA
GGCGGCCAAACAGCTCGGGATCTGCGTCAACGACGAGGACTTCCTCTCGC
CACACGTGAGAGATACAAACAATACACATACATTTGTATACAGCTGTGTG
GAGATCACCCTCAAAGATAAAATGTATGAACCTCCTATGTACATACCGTC
TGCCGAAGATGCTTGGCCCTTTTCACAGCTGTTTGTTTTTTCTTTATGTT
TTTTTATGCTGCTGCTACAGGCTAGTTAGTGCTCCCATTGTGTCACTCCG
AGGTACTGATAAAAAATAAAAAAAATGCTGCAGGAAAACTCTGAGATTTT
GCGAAAACGCCAGCGAACTGTGTATGTACATACTTCGTATGTATGTAGAA
GTATGTACGTGTGTGAAGTTATTTAATCTCCGGAGGGGCTGCAGAGTCTT
GAGATCGAGCGGCCGTTTCAAAACCAACCGACACCTTCTGTCGGACGATT
TATATTTTTGATTCGCTGATTTCTATTCAACCCGTCTCGTCCGAGCGTTT
GGTAAACACAGGGGCAAGCATATGTATGTATCGAGTGTCTACTTTGGTTT
CACCAACCACGCCTTTTGCACTTGTACAATGTACACACATACATACATAC
CGTAGGTGACACAAGATACCACACCCCCTGAACCGAACTTTAGAGCTCCA
TTACACCGTAACGAAGAAGGTGCCAGCACCAAGCAACACATGCTCGGACA
GCCCTCGACTAGATCTTTCCAATTCCATCTCTTTCGGCACTGTCACTCTT
CTTGCTGAGGAAGAATCGAGCTTTGAAAGTCTGTCCAGGGGATGTGGTAT
CTTGTGTCACCTACGGTACAACATACATACCATTTCAAAGCTTAAGCTCG
TTCCATCCACGCGGTGGGACTTTCACAAGTAGTTTTGTTCGACCCATCCA
ACGTCCCACGCGGTCGACCTTTTTTGTCTTAAGTATCCCGCCTGCATCGA
GACGCTCACTCACTCGCATCCCCGAGTGTTTCTTTCTGCCCCCTACACAC
AAGATAGAAGTGTGTGCACCTTGTTGGGACGATCTCGATCTGCACGGGTT
CTTTTGGGTTGGTTCTAAAGGAGAACCAGTTTAAGAACCACAGGGAAGTT
TATGCTCCTACACACAGAGCGTGCACCTTGTTGGGACGTTGGGACGATCT
GCACGGATTATCGGGGGGTTCTCAAGGAGAACCGGTTTTGGAACCGTAGG
AAATAGTTCTTGCCCTGGTCTCAAGGTGTGCGGGGTGCGGGTCGCGTCGT
GAAAGTGAAGAGGTTGGAGGTTGGAGACTGAAAGTCGGTCACCTCTTTTC
AACGATCCGCGTTACGCGGGATGCAGAGAGAGCTGGAAAACAACGTTGTT
ATCGAACACATCTTGTGTATTTATGTACGTACATACGTGTATGCAACACG
GACGCGCGTGCAGGGCCACTCGAAGCACGAGATGTGGATGCATCTGTGCG
ACCTCTGCGCCAAGCACCCCGAGGAGGTTACGGGAGTTCTCAAGGTGAGA
GATTAGATAGAGATACGAGGAGGGGGGGGGGGGGGGGCGGGTATCGGGGG
GGGGGGGGGGGGGGGGGAGGGGCAGATAAAAGTGCCTGTTCAGAATATTG
CTGATCCCTTGGATATGGATTCGTTTTATGACGACCTACAAAATTCCACG
CATCGGGCAAGAGAAGGTAAAGGGTATCTCTCTCTCTGTCGGTCACGCCC
GCGCATTGATCATCGAGGTTACAGTAAATTACTCACTACTGTGTGCGTGT
ACATCAAACATCGCTCGTTGATCGTTTATTCGGTAAATACCAAACATATT
TTCGTAATAACGCGGTATATCGTATACTTTGTGTATGCGCACGTGTACTT
ACACGCGTATTTCGCACCCCGTGGATCAAAATATATAAACCAACACTTCA
AAGCAATGAAGAACAATGATCGCTACAAAGGGAAGTCATGATCAAGATGT
TGTCACAAACAGTTTGGCATGGTGAATTCATAGATTTACTTCTCTACACT
GGCCGGTAAACTTATGCTTGACGGAGTAGTTTTTTTTCCAGTCAAACGTG
TTTGATTTTGGTTCTGTTTTTTTTCTCGGGTGATGTGATGGGATGTGATG
GGATGGGATGTGATGGGATGGGATGGGAGGCGCCACCATCCGCAGCAGGC
TGTCGAGATCCTCGGCAATTCGCGGATTCGGCGAAAAGAAGTGACGCATA
GATTATCTCCAATGTTTTACATGTTTTAGTTTTAGTACCGGGAGTGTTGT
TGGACTTCCACTTTTTGAGGTGGGCTTCATTACGCACGCAGCGAGCGGGT
TACACCGCAGGAGGGGGTCCAACCCCCCCTCCTGTGTGACCCCGGTTGGG
TCGTCTAGCTAGTCGTAGTGGAGGATGGGGGCCAGTGGGGCAGACCACAA
ATATGCCAATGATGGGTGGGAAAAAAGAAAAAAAATGTGTACATGTAAAT
CGAGAATGGCCAAAACAAAGAGCTCAAAAAAGGTCTCAAACGCATTGTTG
TGTGTATCTTTCGTAGATATTGTACGAGTTGTTTTGTTGTGTTTGTTTCT
CTCCCGTTGTATGTATCGTGTTCTCATTCAGGTGGACGCCATTAAAAAAA
AAAATCATAAACATAACATATAACAAAAACAATGATGATCGTCGTTTTCT
TTTGTTTCTCTCCCGTTGTATGTATGTATCGTGTCCATACCCAAGTGGAC
GCTACAAATAAAAAAAATACAGGAGTATACGGAGTATATCATAAGCACAC
ACACACACACATACACACACACACAATCGCCGTTTTGTTTTGTTTCTCTC
TCCCGTTTTCGCTGTCTGCATATATCGTAGGTGGACGCCATCATTCGCAG
CGGGCTGTCGAGGTTCACCGACGAGGTCGGGCGGCTGTGGTGCAAGCTGG
CGGACTACTACATCCGGCTCGGGCAGTTCGAGAGGGCCCGCGACGTCTAC
GAGGAGGCGATCAACAGCGTGGTGAGTATTTAGTAGCCACACGCGGCAGA
GAGACCGCCGCCCGCTGAATACGCATACATAGCCTTGGATAGAGCAGGGT
GCCTGGGAGCAGGGGGGATGGGCAGGGTGCCTGGGAGCAGGGGGGATGGG
ATGCCGATTTGTCGTCCTTGACCGTGACCGTGCCCGTTGCTGCCTATGTA
TCGGTGACGATTTAGGTATCTGGTCGCCGAATAAATCAATCAACCAGCCT
TCGACGTTTGTTTAGGGGACGGTGAGGGGATCCAGTCTGTGAATCCCCTC
ATCCAGGGGGCTCAGTGACGGGCACGATTTGATTGATTTCTTGAATGCAC
ATTTTTTTGGGGTATGTATTCTGAAATTGACAGCACGGACCGCCCGAAAG
ATATCAATCAAGTCGCTCACGTACCGGTGGTTAATTGCTGTCGAAAAGGG
AGGTATAGATGGAGGCGTGGTGGGCCCGCCGCAAGCCAGGAGAAAACACA
CACGCAAATATCACACTGAATGAGAGGGGGAACGCACAACGATGGGGAGA
CGCAGGTGGGGTTCGGAGGGGGGTCCCGTGAGAGCTAGGATTTATTGCTG
GTGGAGAGGGTGCAGTGACGGCATCCCCTTTTTGCACGACGCGCGTGCAA
ATAACAACGTGCACGCCTCGTGTCTGATTGGCCGAAGATCCGCCGCACGG
TCTTTGCAAGCCGCGCAGAGGCCACTTTCGCATCCGATCACCCCAGAGCC
CAGAGGTCACGCGTTCGGGTTCGGGTTCGGGTTGGGGTTGGGTTGTGTTG
GGTCGGGAGCGGCATAAACTCGCAAAGCGTTGCCACGAGGCGTGCGAAAG
TGGCGTTCGAAGCGTGCACGTCTTACTTGCACGCGCGTCGTGCAAATAGG
GGTTCCCGTGCAATGACGCGAGTGACTGCTGTCGCAACGTGGAACACCTG
CGTGGTTGATTTCGGAAGGACAGCTTCTGCTGCTGCTGCTGCTGTCTCGT
CGTTCGCCGGATTTTTGCGGCGAAATAGGTGACGGTTCGGGACAACACCA
TTGCTGCTGCTGTGTCGTTGTTCGCCGGGTGTTTGCAGAGTGCAAAGTTG
CACGAACATGCACGTGTGCGTACATACATACGAGGACCGTCTTGTTAACC
ATTTTTGGGCGCTTTTTGCGGCGAAATAGGTGACGGTTCGGGACTTCACC
ATGGTGTTCGACGCCTACACACAGTTCGAGGAGAGCGTGCTCACGGCCAA
GATGCGGATGGCGGAGGTAAATATGGCATTTGCTCCTGTCTAACTACTTC
GTATATCTATATGCATGCATCGGTTGGATATTGTTGTTGCCGTTGATCCG
TAGACCCGTTGAGCTGTTTCGCTCTGAAGATAAATAGCCAAATGATCTAT
ATGCCTGTTGTTCGCGAAAGAGGGACGAAGACATTTCCAAGATCGGTTCG
GATCCACAAATAATCAATATATAGGTCGTTTCATGGCTATCTTCTTAGAC
ACAACACTCTCTGTTTGTATATCTTCTTTCGATTGCATAGTTTTTTGTCA
CACCCGCAGGTATGGAAACGCTAATTTTATGTTTTGTACTTCTAGTACTA
CTTCGAAGTCGTATTTATGTACCATATCCGTGTGTATAGACTTAACTACA
ATTATGTATTTTGATTCTTCCTGATACGTGGAAATCCCCGCAATCTTTAA
CGTGTTCTCGCACACAAATACTTTTTTAGTTTTTTTAAGCTGCATCCTGC
TCTCCGGAATTTATTCATCCCAACGCTGCAACTCCCATCTTCGGGCTCGA
TGTTTGGGCTGAGCTACGGCTGTGCAAAGTCGTTTTTTCCTATCTCCGGA
GGCGTCACCCATTCATTTATCAAGTGAAGCCAATGCCTGACGCCATGATA
CCGGAGCTTTCCCATGTTATTTTTGGTGCTCTCACACACAAATGAGTCTA
GTATTTTTTACACGTGCTTATTCATCCCTGGAATGTATGCAATCCAACGC
AACAACTCTCATCTCGAGATTCCACCTGAGACCCTAGATATGACCACTCA
AACGTTCCCACTACATTTGTGCGGATTTTCGCGTCCTAGGCGGTCATGAT
GGGGTTGACATGATGGTTGACGTAAGCATGCAGGCTTCGGGCAAATGCAA
TATTGCCGACATCAGCATGCAGGCTTCGGGCAAATGCTGCAATCTTCAAA
TCTTCAAAGATATTCGTTGGCGAAGAGCGCCCTCTGCCGCCCCACTCCGC
GCACACAACGCACCCGCCACCAACTACATATATATGTATATGGCATCTCT
GTGTTTTCGCGGGTTTGTTTCTGTCTGTCAAGTCTCTGCACAACATCGTG
TGGTGTACCTGCCATCACTGAAATGGATGCGAGTAAAGGGCGAATGCCAC
CAGTTGTCAGCATACATACCCGCTGAACGCCTTGGTATGCGATATTTCTT
CTCCAGTCAAACTCATCAAAACATCATCACAAACCGAAATCCTTCGTCGG
AGGACGAAGGGGGCCGGCAGGCCCCCGAGTCCAGGGCCTTGTACAACAGT
AATATTTTGTTTCTTTGTTGTACAGCATTGTTTTGTTTCTTTCTTTGGCG
CAGGAGATATTTGGCCGAAAATGTTGCTTTTTTTCGAAATGAAAAAATAT
TTAAAAGCTATCGACTTAGCTCGACGAGGGGGTCACGAATACCGTTGTTT
CACTTTTCAACTCGTTTTTGTTCGAAAGTTATCGCGCAAAACGTGAGTGG
AAAAATTGTCCCGGACGGACCCTATGTTTATTGTACAACGCTGTTTTGTT
TCTTTCTTTGGCGCAGGAGAGCGACGACGACGACAGCGAGTCCGACGGGC
TAGGCGCCGATCTCGATGAGGACGGCGACGTAGAGCTGAGGCTTGCTCGC
CTCGAGCATCTCCTAGAGCGCCGCCCGATCTTGGTGAGATGGGTACATGC
CATACAGCAGGGTTATGGGTCGTTTCATTATGTTTCGTGTTAAGCTTTTC
GATATGCTATGAATATCAATCACGCCGTACTAATATTGTAGAAGCTTTTT
GGACGCATTTAGAGCGAGCGAGCAAGGAAGATAGGGAAAAAACGCCTCAA
CAGCGAGAGAGGAAACCCCAAAACCAGAACTTGTACTAGTAGATGTGGCC
TATTGTCGCCACGCTTGGATGAGAGAGGAAGGCAGAGAGAGAGAGAGAGA
GAGAGAGAGGCCTACCGAAAAACAGAATCAGCGAGTGCTGCTGTCTACGG
ATGTACCATACCCTTGTTCAGGTATACGTTAGCCTGTGACCACGGGAATT
GGCCGCGTCGAGTGCTGGCATAGCACGGACATAATGAGGTACTGGGTGGA
GAGAGAGGTCGGGGCGGTTTTTTAACGTGAAGGAAACAACAGCAACACAA
TTTAGTTTCCTTTGTTTGGGGTGGCGATTTGGGGGCCTGGGTTGAACCAG
GACCATATCACCACAAGGGAGATGGGAAATAGTAAAAAGGCAATTTTTCG
TGAAAGTGACTACAAAAGTGGAAAATTAAGTCTGACGTAATCTGGTGTTT
TGGAAGAACGGGTAGAAAGATTTGAATAATCAGGGGGGCCAGAAGATGGA
TAATGCGAGGGTACGGGAAATAAAAATGATACTATGAAAGCCCCCTCCCC
CACCTGAGAGAAAGCAAGACGCACCTCAAAGGAAAGATCGCGACAGAACC
GAAGATATCCAGTAGAAACATAGAGAAGAACAGAAGCAAGGAAGAGGAGG
TGCAGTAGAAGGGGGTAGTTGGAGAGCGTGCTTTCTTTTACCCTCCCGCC
CAACAAATGTAGTACATCCGAGGGAGCAAAAAAACAATTATCATAAATGC
ACATACATTTACATAGAACAGTTCAACCTACCCTGCGCAACTCTGCCGGG
CCAACCAGTGGTTATTCCGGGGAAGCGCCACCTTTGATGCCGTCGTGTCT
TGTTTGCTTTTATTTATTTTGGTCTCCAGGTGAGCTCTGTGCTCCTTCGC
CAAAACCCGCACAACGTCAACGAGTGGCAGAAGCGGGTCAAGCTGTTCGC
CGAGGACCCCCGCAAGGCCATCATCTGCTACACCGAGGTGTGTGTGTGTG
TGTGTGTCTGTCTGTCTGTCTGTCTGTTTATGTGTCTGTGTCTGTGTCTG
TGCGTGTGTGAGCGCGCGCGCATCACGCGCCATCACGAGACCCACAATCA
TACCACATACGCAAGCAGTTGCTTTCGTCGGTGTTATACAAGTACTCATC
ATAGAGATATGTAGGACATGCACGCCTTTTGTGAAAACAATTCCGGCAAT
CACCCAACCCAAGCCAGGAATCGAGGAGATAGTGGGCGGGGGTGGGTGGG
CCTGCTTTTTGGTTTATTTTTTGTGTCAACCCGGAGGATAGTAGATATGT
ACAAAACATACTTATGGCCCTTCTGTTTACGTGTTAATTTGGCGCCTCCT
GTCCCCCTCCCCCCCCCCCTCCTCTTTATCATCTTGCCCGACCAGCTTAC
CCAGATCGCCGGGCCTATCAGAGCCTACCACCCTCTGATACCTCTCACAC
CGCCGGCGATAAAACCAACCAACCAATCCATGATAAATTTTCTCCCCGGA
CCCCCGAACCTCCTTGCCTTACACACTACCCCCCCCCCCCCCCCGGGCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCGCG
ACACCCCCCCCCCCCCACACCNNNNNNNNNNCCCCCCCGGATAAAAATTA
TATCCCCAACACCACCACCCCCCCCTCTTTTTCCCTCTCCTTTTCCCCCC
CCCCGCCCCCCCCCCCCCCCCCCCCACCCCCTCGCCTCTCTATCTCAGGC
GGTGAAGACCGTGGACCCCAAGAAGGCGACCGGCAAGCTGAACAAGTTGT
GGATGGACTTTGCCAAGTTCTACGAGGGGCACGGGGACGTGGCGAACGCC
AGAGTCATCTTCGAGAAGGCCACCTTGGTCCCCTACAGGCGAGTTTGTTG
TTGTTGGTGT

Coding sequence (CDS) from alignment at L-elsbetiae_contig1454:12257..25366+

>mRNA_L-elsbetiae_contig1454.3323.1 ID=mRNA_L-elsbetiae_contig1454.3323.1|Name=mRNA_L-elsbetiae_contig1454.3323.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2220bp|location=Sequence derived from alignment at L-elsbetiae_contig1454:12257..25366+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTTCCCTGGGCCAGGACATCAAGGAGTTCCTGGAGAACGAGAAAGA
CATCGAGTTCGAGGAAGAGATCTCTCGCAATCCTTACCGACTCAAGTCGT
GGTGGAGGTACCTGCTGGCGAAGGAGGGCGCCAAGCCCAAGACGCGCAAC
ATCATCCACGAGCGGGCGCTCAAGTTCCTCCCCAACAGATGGCTTCCCTG
GGCCAGGACATCAAGGAGTTCCTGGAGAACGAGAAAGACATCGAGTTCGA
GGAAGAGATCTCTCGCAATCCTTACCGACTCAAGTCGTGGTGGAGGTACC
TGCTGGCGAAGGAGGGCGCCAAGCCCAAGACGCGCAACATCATCCACGAG
CGGGCGCTCAAGTTCCTCCCCAACAGCTACAAGCTGTGGCACCAGTACCT
GGGTGAGAGGAGATCGGCAGTGGAGGGAAAGTGCATCACCGACCCGGCCT
GCCAGATCGTGGTTAACGCCCATGAGCGAGCGCTGCTACAAGCTGTGGCA
CCAGTACCTGGGTGAGAGGAGATCGGCAGTGGAGGGAAAGTGCATCACCG
ACCCGGCCTGCCAGATCGTGGTTAACGCCCATGAGCGAGCGCTGATATGG
CCGCCGTACCTGGAATGGGCTAAGGCGTTCGGCGTGAGGGAGACGGCGGT
GCGCGTTTTCAGATATGGCCGCCGTACCTGGAATGGGCTAAGGCGTTCGG
CGTGAGGGAGACGGCGGTGCGCGTTTTCAGGCGCTATCTCATGTTCGACC
CAGCCCACCGCGAGGACTACGTGGAGTACCTGGAGGCGGAGGGGCAGTGG
GAGGAGGCGGCCAAACAGCTCGGGATCTGCGTCAACGACGAGGACTTCCT
CTCGCCACACGCGCTATCTCATGTTCGACCCAGCCCACCGCGAGGACTAC
GTGGAGTACCTGGAGGCGGAGGGGCAGTGGGAGGAGGCGGCCAAACAGCT
CGGGATCTGCGTCAACGACGAGGACTTCCTCTCGCCACACGTGGACGCCA
TCATTCGCAGCGGGCTGTCGAGGTTCACCGACGAGGTCGGGCGGCTGTGG
TGCAAGCTGGCGGACTACTACATCCGGCTCGGGCAGTTCGAGAGGGCCCG
CGACGTCTACGAGGAGGCGATCAACAGCGTGGTGGACGCCATCATTCGCA
GCGGGCTGTCGAGGTTCACCGACGAGGTCGGGCGGCTGTGGTGCAAGCTG
GCGGACTACTACATCCGGCTCGGGCAGTTCGAGAGGGCCCGCGACGTCTA
CGAGGAGGCGATCAACAGCGTGGTGACGGTTCGGGACTTCACCATGGTGT
TCGACGCCTACACACAGTTCGAGGAGAGCGTGCTCACGGCCAAGATGCGG
ATGGCGGAGGTGACGGTTCGGGACTTCACCATGGTGTTCGACGCCTACAC
ACAGTTCGAGGAGAGCGTGCTCACGGCCAAGATGCGGATGGCGGAGGAGA
GCGACGACGACGACAGCGAGTCCGACGGGCTAGGCGCCGATCTCGATGAG
GACGGCGACGTAGAGCTGAGGCTTGCTCGCCTCGAGCATCTCCTAGAGCG
CCGCCCGATCTTGGAGAGCGACGACGACGACAGCGAGTCCGACGGGCTAG
GCGCCGATCTCGATGAGGACGGCGACGTAGAGCTGAGGCTTGCTCGCCTC
GAGCATCTCCTAGAGCGCCGCCCGATCTTGGTGAGCTCTGTGCTCCTTCG
CCAAAACCCGCACAACGTCAACGAGTGGCAGAAGCGGGTCAAGCTGTTCG
CCGAGGACCCCCGCAAGGCCATCATCTGCTACACCGAGGTGAGCTCTGTG
CTCCTTCGCCAAAACCCGCACAACGTCAACGAGTGGCAGAAGCGGGTCAA
GCTGTTCGCCGAGGACCCCCGCAAGGCCATCATCTGCTACACCGAGGCGG
TGAAGACCGTGGACCCCAAGAAGGCGACCGGCAAGCTGAACAAGTTGTGG
ATGGACTTTGCCAAGTTCTACGAGGGGCACGGGGACGTGGCGAACGCCAG
AGTCATCTTCGAGAAGGCCACCTTGGTCCCCTACAGGCGAGTTTGTTGTT
GTTGGTGTGCGGTGAAGACCGTGGACCCCAAGAAGGCGACCGGCAAGCTG
AACAAGTTGTGGATGGACTTTGCCAAGTTCTACGAGGGGCACGGGGACGT
GGCGAACGCCAGAGTCATCTTCGAGAAGGCCACCTTGGTCCCCTACAGGC
GAGTTTGTTGTTGTTGGTGT