prot_L-elsbetiae_contig14523.3318.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14523.3318.1
Unique Nameprot_L-elsbetiae_contig14523.3318.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length385
Homology
BLAST of mRNA_L-elsbetiae_contig14523.3318.1 vs. uniprot
Match: D7G411_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G411_ECTSI)

HSP 1 Score: 464 bits (1193), Expect = 2.000e-145
Identity = 267/389 (68.64%), Postives = 302/389 (77.63%), Query Frame = 0
Query:    1 PGACSLNGAVTLLLFQARVEFDESTEAFFGPNGILGPGGGNTVREIPPRQKADLGVESVKSLLARIKGVFQWFKMAKDCYGHVMSWENPALSSFTLVAFVYLSLVANAEYLLALLPFSLLLFMTWGFLSRRNGGYVQGWVSASADSARARADSKANSAGFRPVGTLKAAVVRGKGLVSADLNLPGNAYVRVSYVIPDSNAAKSTKNLFADDSSTGDDRQPPGTSTREYLVGQTVPQPVGDSPEWGSVG--GXXXXXXXXXXXXXXMKAAGAKASSVSMVDQSRGPGFLSGGSDALLQNMMDVWGRHAFPEDAEPSAVDSEDRSEDRATKQPEKYSAAVQEEDMCFVYPVLQPRVRRRS----GSGGLVWSGEESGTFLRFSVFFANPFN 383
            PG      ++T LL QARVEFDESTEA FGPNGILGPGGG+ +R +PPRQKADLGVE++KSL+ARIKGVF WFKMAKDCY  VMSW+NPALSS +L+AFVYL+LVANAEYLLALLPFSLL+FMTWGFL RR GGYVQ WVS+ +  A+    SK   AGFR VGTLK AVVRGKGL+S+DLNLPGNAYVRVSYV+PD+              STG D     ++TREYLVGQTVPQP GD P WGSVG  GXXXXXXXXXXXXXX   A  + SSVSM+DQSRGPGFLSGGSDA+LQNMMDVWGRHA    A      S +RS +++ ++PE  +A  +EEDMCFVYPVLQP +RRR+    G G L WSGEES TFLRFSVFFANPFN
Sbjct: 1263 PGMAEDEASITGLL-QARVEFDESTEALFGPNGILGPGGGDALRLVPPRQKADLGVETLKSLVARIKGVFLWFKMAKDCYSRVMSWDNPALSSISLMAFVYLTLVANAEYLLALLPFSLLMFMTWGFLQRRGGGYVQSWVSSESGGAQGPGGSKG--AGFRAVGTLKIAVVRGKGLISSDLNLPGNAYVRVSYVVPDN--------------STGGDDDGHHSNTREYLVGQTVPQPTGDCPVWGSVGVGGXXXXXXXXXXXXXXGAQASTRVSSVSMMDQSRGPGFLSGGSDAILQNMMDVWGRHASSGAAVTHVEGSGERSAEQSEQRPESTTAGQEEEDMCFVYPVLQPVLRRRARDGRGGGSLPWSGEESRTFLRFSVFFANPFN 1634          
BLAST of mRNA_L-elsbetiae_contig14523.3318.1 vs. uniprot
Match: A0A6H5L011_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L011_9PHAE)

HSP 1 Score: 457 bits (1175), Expect = 1.280e-142
Identity = 259/392 (66.07%), Postives = 300/392 (76.53%), Query Frame = 0
Query:   14 LFQARVEFDESTEAFFGPNGILGPGGGNT---------------VREIPPRQKADLGVESVKSLLARIKGVFQWFKMAKDCYGHVMSWENPALSSFTLVAFVYLSLVANAEYLLALLPFSLLLFMTWGFLSRRNGGYVQGWVSASADSARARADSKANSAGFRPVGTLKAAVVRGKGLVSADLNLPGNAYVRVSYVIPDSNAAKS--TKNLFADDSSTGDDRQPPGTSTREYLVGQTVPQPVGDSPEWGSVG-GXXXXXXXXXXXXXXMKAAGAKASSVSMVDQSRGPGFLSGGSDALLQNMMDVWGRHAFPEDAEPSAVDSEDRSEDRATKQPEKYSAAVQEEDMCFVYPVLQPRVRRRS----GSGGLVWSGEESGTFLRFSVFFANPFN 383
            L QARVEFDESTEAFFGPNGILGPGG                  +R +PPRQKADLGVE+++SL+ARIKGVF WFKMAKDCY  VMSW+NPALSS +L+AFVYL+LVANAEYLLALLPFSLL+FMTWGFL RR GGYVQ WVS+ +   +    SK   AGFR VGTLK AVVRG+GL+S+DL LPGNAYVRVSYV+PD NA+ +  T+ +FA+D+STG D     ++TREYL+GQTVPQP GD P WGSVG G   XXXXXXXXXXX   A  + SSVS++DQSRGPGFLSGGSDA+LQNMMDVWGRHA  + A      S +RS + + ++ E  +AA +EEDMCFVYPVLQP +RRR+    G G L WS EES TFLRFSVFFANPFN
Sbjct: 1290 LLQARVEFDESTEAFFGPNGILGPGGXXXXXXXXXXXXXXXXXXLRLVPPRQKADLGVETLRSLVARIKGVFLWFKMAKDCYSRVMSWDNPALSSISLMAFVYLTLVANAEYLLALLPFSLLMFMTWGFLQRRGGGYVQSWVSSGSGGGQGPGGSKG--AGFRAVGTLKIAVVRGRGLISSDLKLPGNAYVRVSYVVPDRNASATHGTEPMFANDNSTGGDDDGGHSNTREYLIGQTVPQPTGDCPVWGSVGFGGGRXXXXXXXXXXXXAQASTRVSSVSIMDQSRGPGFLSGGSDAILQNMMDVWGRHASSQAAVTHVEGSGERSAEESKERSESTTAAQEEEDMCFVYPVLQPVLRRRARDGRGGGSLPWSSEESRTFLRFSVFFANPFN 1679          
BLAST of mRNA_L-elsbetiae_contig14523.3318.1 vs. uniprot
Match: A0A835ZCX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCX8_9STRA)

HSP 1 Score: 109 bits (273), Expect = 3.030e-22
Identity = 88/283 (31.10%), Postives = 124/283 (43.82%), Query Frame = 0
Query:   44 REIPPRQKADLGVESVKSLLARIKGVFQWFKMAKDCYGHVMSWENPALSSFTLVAFVYLSLVANAEYLLALLPFSLLLFMTWGFLSRRNGGYVQGW------------------VSASADSARARADSKANSAG---FRPVGTLKAAVVRGKGLVSADLNLPGNAYVRVSYVIPDSNAAKSTKNLFADDSSTGDDRQPPGTSTR-EYLVGQTVP-QPVGDSPEWGSVGGXXXXXXXXXXXXXXMKAAGAKASSVSMVDQSRGPGFLSGGSDALLQNMMDVWGR 303
            R  P R   DL VE++K  + R +G+  W       Y  VMSWE+P L+   L  F+YL+L+++AEY+LA  PF+LL +M   +L+RR+G YV+ W                   +A A     R D          +RP+  L+ AV+RG+ LVS DL LPGNAYVRV+Y                  + T D           E+ VG+T P +     PEW                            +++     RG G   GG + LLQN+ + W R
Sbjct: 1204 RAAPSRALDDLTVETLKRYIERAQGIVGWLSAWGRVYSRVMSWESPLLTGAALALFLYLTLLSSAEYVLAGPPFALLAYMGHAWLARRDGRYVRCWPHFAGAGPRVGLGPSDKSAAADAQGVEGRVDXXXXXXXXXXYRPLAQLRVAVLRGRNLVSEDLGLPGNAYVRVTYAPAAVGGVXXXXXXXXXXALTADGAAGAKRGAAPEFTVGETAPLEGARPDPEW---------------------------RALAPWGGGRGGG---GGDNVLLQNVTEAWPR 1456          
BLAST of mRNA_L-elsbetiae_contig14523.3318.1 vs. uniprot
Match: A0A1E7F632_9STRA (Phorbol-ester/DAG-type domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F632_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.130e-8
Identity = 44/173 (25.43%), Postives = 82/173 (47.40%), Query Frame = 0
Query:   19 VEFDESTEAFFGPNGILGPGGGNTVREIPPRQKADLGVESVKSLLARIKGVFQWFKMAKDCYGHVMSWENPALSSFTLVAFVYLSLVANAEYLLALLPFSLLLFMTWGFLSRRNGGYVQGWVSASADSARARADSKANSAGFRPVGTLKAAVVRGKGLVSADLNLPGNAYVRV 191
            V  +E     +GPN I          E P R  ADL + +  + + RI+ + +        Y +V+SW++P L++F+L  FV   +  NAEY  +L     ++ + +  + R  G     ++    ++ +    +      +RP GT++ +V +G+ L+S +L + GN   RV
Sbjct:  805 VGVEEFYSRLYGPNPI----------ECPNRPPADLNMANFSNYIGRIRAIIEDLSHGITQYQYVVSWDDPMLTAFSLCVFVIFCVRFNAEYSGSLPVLFFIVVLIYFAVRRTQGKIKSSYIRKEVETMQKVEGNAVGDMIYRPRGTIRVSVTKGRNLLSPELGIAGNTSCRV 967          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14523.3318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G411_ECTSI2.000e-14568.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L011_9PHAE1.280e-14266.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZCX8_9STRA3.030e-2231.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1E7F632_9STRA3.130e-825.43Phorbol-ester/DAG-type domain-containing protein n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 129..384
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 105..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..128
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 110..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14523contigL-elsbetiae_contig14523:549..4245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14523.3318.1mRNA_L-elsbetiae_contig14523.3318.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14523 549..4245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14523.3318.1 ID=prot_L-elsbetiae_contig14523.3318.1|Name=mRNA_L-elsbetiae_contig14523.3318.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=385bp
PGACSLNGAVTLLLFQARVEFDESTEAFFGPNGILGPGGGNTVREIPPRQ
KADLGVESVKSLLARIKGVFQWFKMAKDCYGHVMSWENPALSSFTLVAFV
YLSLVANAEYLLALLPFSLLLFMTWGFLSRRNGGYVQGWVSASADSARAR
ADSKANSAGFRPVGTLKAAVVRGKGLVSADLNLPGNAYVRVSYVIPDSNA
AKSTKNLFADDSSTGDDRQPPGTSTREYLVGQTVPQPVGDSPEWGSVGGG
GGGGGGAGAGGGGMKAAGAKASSVSMVDQSRGPGFLSGGSDALLQNMMDV
WGRHAFPEDAEPSAVDSEDRSEDRATKQPEKYSAAVQEEDMCFVYPVLQP
RVRRRSGSGGLVWSGEESGTFLRFSVFFANPFNR*
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