prot_L-elsbetiae_contig14519.3315.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14519.3315.1
Unique Nameprot_L-elsbetiae_contig14519.3315.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length260
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig14519.3315.1 vs. uniprot
Match: D7FTP9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTP9_ECTSI)

HSP 1 Score: 340 bits (873), Expect = 1.410e-115
Identity = 176/259 (67.95%), Postives = 201/259 (77.61%), Query Frame = 0 
Query:    1 MESSRVKNGYGLCTSTLSASVIGRFDGSSEKRKASNRAWDHLYNVDASYQMRKLEGTHPVRKVLHMQKSFPETVMRLNDKGSSNTSGTTASSPTA-RPISSRWLRNPSPNNKNTPL-------QPSSSVHICHGTNDAGQGVSNDATGRRIADEYQFCHNKMAYNRTKGREAEVDGILTGKSPLEKKLPLFPAKATHQQLLGLVQRPSHPDKPAPAVPRERKWLGNNVGWEGNRGLPTPPAGRDAKDGEVHPWPSSQYP 251
            ME  RVKNGYG  TSTLSASVIG FD SSE+RKA+NRAW+  Y+ DA +QMR+L+G HPVRKVLHMQK +PETV RLN +G ++        P A RPIS RW RNP+PNN NT +       +P SS+       D G  +S + T RR   EY FC +KMAYNRT+GREAEVDGILTG SPL+K+LPLFPAKATHQQLLGLV RP+HPDKPAPAVPRERKWLG+NVGWEGNRG+ TPPAGR+AKDGEVHPWPSSQYP
Sbjct:    1 MEQIRVKNGYGFLTSTLSASVIGDFDASSEERKATNRAWNQKYDTDAVFQMRQLQGNHPVRKVLHMQKCYPETVFRLNRQGRTH-------EPDADRPISGRWHRNPAPNNYNTSVATQQRHRRPQSSLQADRSA-DGGHELSGNTTRRRGGYEYHFCRDKMAYNRTRGREAEVDGILTGTSPLDKRLPLFPAKATHQQLLGLVHRPTHPDKPAPAVPRERKWLGDNVGWEGNRGMATPPAGRNAKDGEVHPWPSSQYP 251
[Close]
BLAST of mRNA_L-elsbetiae_contig14519.3315.1 vs. uniprot
Match: A0A7S2XVD6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVD6_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.230e-13
Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = 0 
Query:  181 PLFPAKATHQQLLGLVQR--PSHPDKPAPAVPRERKWLGNNVGWEGNRGLPTPPA-GRDAKDGEVHPWPSSQY 250
            P+FP  A+HQ  L + ++     P K AP   +  +WLG+ VGWE NRGLPTPP  G D KDG + PWP+++Y
Sbjct:   25 PIFPQGASHQTQLTIDKKLVGDDPRKSAPPTKQPLRWLGDGVGWENNRGLPTPPGVGADGKDGAIKPWPTTKY 97
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14519.3315.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTP9_ECTSI1.410e-11567.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2XVD6_9STRA3.230e-1347.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14519contigL-elsbetiae_contig14519:719..4165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14519.3315.1mRNA_L-elsbetiae_contig14519.3315.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14519 719..4165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14519.3315.1 ID=prot_L-elsbetiae_contig14519.3315.1|Name=mRNA_L-elsbetiae_contig14519.3315.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=260bp
MESSRVKNGYGLCTSTLSASVIGRFDGSSEKRKASNRAWDHLYNVDASYQ
MRKLEGTHPVRKVLHMQKSFPETVMRLNDKGSSNTSGTTASSPTARPISS
RWLRNPSPNNKNTPLQPSSSVHICHGTNDAGQGVSNDATGRRIADEYQFC
HNKMAYNRTKGREAEVDGILTGKSPLEKKLPLFPAKATHQQLLGLVQRPS
HPDKPAPAVPRERKWLGNNVGWEGNRGLPTPPAGRDAKDGEVHPWPSSQY
PAFTRDPSL*
back to top