prot_L-elsbetiae_contig14502.3309.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14502.3309.1
Unique Nameprot_L-elsbetiae_contig14502.3309.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length396
Homology
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BLAST of mRNA_L-elsbetiae_contig14502.3309.1 vs. uniprot
Match: D7G7C4_ECTSI (FYVE-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C4_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 1.160e-54
Identity = 108/152 (71.05%), Postives = 118/152 (77.63%), Query Frame = 0 
Query:   89 DANGSAPGSPASLAAAAAAVTAADVRALAIVGSNGAPSKKKMLDLKLLQSGTSLAVRLKKQAPFTPSPSEFRARERQDLADQPFCGVCAAPFTLMMRRQRCAVCGESVCAQCSSDKRHVEGQKGLQRVCDICIVEGPVVLDENGVYSAGPSP 240
            ++NGSAPGSP SLAAAA A                      + DLKL  SGTS  +RLKKQA FTPSPSEF++RERQD+ DQPFCGVCAAPFTLMMRRQRCAVC +SVCA CSSDKRHVEGQKGLQRVCDICIVEGPVVLDENG+Y+A PSP
Sbjct:    4 NSNGSAPGSPDSLAAAADARX-XXXXXXXXXXXXXXXXXXXVKDLKLRPSGTSRTLRLKKQAQFTPSPSEFKSRERQDVVDQPFCGVCAAPFTLMMRRQRCAVCADSVCAPCSSDKRHVEGQKGLQRVCDICIVEGPVVLDENGMYAASPSP 154
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14502.3309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7C4_ECTSI1.160e-5471.05FYVE-type domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 161..226
e-value: 1.7E-4
score: 27.8
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 166..221
e-value: 7.8E-10
score: 38.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 164..226
e-value: 4.4E-11
score: 44.4
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 167..225
score: 9.947
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 168..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14502contigL-elsbetiae_contig14502:1514..3837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14502.3309.1mRNA_L-elsbetiae_contig14502.3309.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14502 1514..3837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14502.3309.1 ID=prot_L-elsbetiae_contig14502.3309.1|Name=mRNA_L-elsbetiae_contig14502.3309.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=396bp
VQDSLSKTKQDPSSSSSGGGKDKDKDSSNAPMSGNSSTHSSAERPSSSRI
ASIISGSSNHGGGGGSHNHKASSLFGPLLDMKNGNKDKDANGSAPGSPAS
LAAAAAAVTAADVRALAIVGSNGAPSKKKMLDLKLLQSGTSLAVRLKKQA
PFTPSPSEFRARERQDLADQPFCGVCAAPFTLMMRRQRCAVCGESVCAQC
SSDKRHVEGQKGLQRVCDICIVEGPVVLDENGVYSAGPSPAATPVDGAVV
TAITPVPVAPPVLAPSSSAERSAAAVLKAAAAATSASPSAGTKKSSSSSA
TKSAAAAAAAASPTTTTAKPPRSPAAAAAAAAAAAMATTEKLPPRSPASE
TTFKPPRSPVTVTTVVKGVGTHSTVDGARGGGGGTAKDYFSKAVAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000306Znf_FYVE
IPR013083Znf_RING/FYVE/PHD
IPR017455Znf_FYVE-rel
IPR011011Znf_FYVE_PHD