prot_L-elsbetiae_contig145.3305.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig145.3305.1
Unique Nameprot_L-elsbetiae_contig145.3305.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length736
Homology
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BLAST of mRNA_L-elsbetiae_contig145.3305.1 vs. uniprot
Match: D7FQ87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ87_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 1.090e-121
Identity = 198/270 (73.33%), Postives = 220/270 (81.48%), Query Frame = 0 
Query:   58 MGADGEPVGMGASPFFTLDSDNISASSEARSGIFQDGLPAKEVSLIATTREDMATTVRLVAVNFLDRGSISTFEPRTPFEVGNQTVRVDVRISDWTFCTPFGLNGGRQCLAEPQDILLQNQGALPLAPIPPPPHTLLIPRCDGETVATLRFVCDSRLLPECEDIVSVKLYLGEADQDPGQAPNTATIG----RPGNGTSSSSADADALEEFGGTGVYEHNLTSAEVAGFLNVSSLTPGLDYVFWSVWEHGDGSTPESNSQDFDLSRTQYW 323
            M +DG+PVG+  SP F  DSDNIS SS  RSG++QDGL A+EVS +ATT    ATTV LVA N+L  G+ISTFEP T  EVGN+TVR+DVRI DW+FCTPFG +GGR+C+AEPQDI LQN+GALPL P PPPPHTLLIPRCDGETVAT RFVCD RL+ EC D+VSVK YLGEADQDPGQAPNTATIG       NGTS+SS+ A  LEEF GTGVYE NLT AEV  FLNVSSLTPGLDYVFWSVWEHG+GS PESNS+DFDL R QYW
Sbjct:    1 MDSDGKPVGVEGSPLF-FDSDNISVSSTRRSGVYQDGLDAEEVSSVATTT-GTATTVSLVATNYLGDGNISTFEPSTLVEVGNETVRLDVRIRDWSFCTPFGRDGGRRCMAEPQDIFLQNEGALPLPPAPPPPHTLLIPRCDGETVATFRFVCDPRLV-ECADVVSVKYYLGEADQDPGQAPNTATIGVARGSGENGTSTSSSGA--LEEFWGTGVYERNLTRAEVGSFLNVSSLTPGLDYVFWSVWEHGNGSAPESNSRDFDLPRVQYW 265
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig145.3305.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQ87_ECTSI1.090e-12173.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 535..559
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..534
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 560..735
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.669
NoneNo IPR availableTMHMMTMhelixcoord: 537..559

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig145contigL-elsbetiae_contig145:48486..53213 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig145.3305.1mRNA_L-elsbetiae_contig145.3305.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig145 48486..53213 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig145.3305.1 ID=prot_L-elsbetiae_contig145.3305.1|Name=mRNA_L-elsbetiae_contig145.3305.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=736bp
MKAFILALLAAGHASSLRTPTVEPSENGAVGCRVVNGEANSEGHFEAVEM
VVSAITEMGADGEPVGMGASPFFTLDSDNISASSEARSGIFQDGLPAKEV
SLIATTREDMATTVRLVAVNFLDRGSISTFEPRTPFEVGNQTVRVDVRIS
DWTFCTPFGLNGGRQCLAEPQDILLQNQGALPLAPIPPPPHTLLIPRCDG
ETVATLRFVCDSRLLPECEDIVSVKLYLGEADQDPGQAPNTATIGRPGNG
TSSSSADADALEEFGGTGVYEHNLTSAEVAGFLNVSSLTPGLDYVFWSVW
EHGDGSTPESNSQDFDLSRTQYWQCPGTTIERNFEVGTSLSVSLVLNGPT
ALVPLCDNSSSTLSSPSDSSASSTSSCLQVSTSAGADATAARGRRLRVAA
GEGSRYSSSPLSSTKQNHRLLQEGDATFDQSAGGDGSWAWDEDGPTFGLG
ELSRVRLSSHTLLLDDGGGEAWTPLRNASSVAAAVVADTDGEDDGRAGVI
TASLESFGVQEAVFSTMLFFSRAEAVEASGRGGGVWAATWVAIVFVLIFL
VWMLGCCSFRAVKESRAAKTWPVEMARATARAKDEFDSYYNESTFGSPST
SEADCSMSGVKELQIFPMMVMATTKPSVSRHEEEGEGKSLTFRNTSSEED
EESSCTPPIGAPGWTTPGSGSAKHNIKTNDNTANNTANNNSDNLTVTSPV
PSSHINDIDISMSEPPLSPRRRRPPREAFPLADAV*
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