mRNA_L-elsbetiae_contig145.3305.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig145.3305.1 vs. uniprot
Match: D7FQ87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ87_ECTSI) HSP 1 Score: 382 bits (981), Expect = 1.090e-121 Identity = 198/270 (73.33%), Postives = 220/270 (81.48%), Query Frame = 1 Query: 172 MGADGEPVGMGASPFFTLDSDNISASSEARSGIFQDGLPAKEVSLIATTREDMATTVRLVAVNFLDRGSISTFEPRTPFEVGNQTVRVDVRISDWTFCTPFGLNGGRQCLAEPQDILLQNQGALPLAPIPPPPHTLLIPRCDGETVATLRFVCDSRLLPECEDIVSVKLYLGEADQDPGQAPNTATIG----RPGNGTSSSSADADALEEFGGTGVYEHNLTSAEVAGFLNVSSLTPGLDYVFWSVWEHGDGSTPESNSQDFDLSRTQYW 969 M +DG+PVG+ SP F DSDNIS SS RSG++QDGL A+EVS +ATT ATTV LVA N+L G+ISTFEP T EVGN+TVR+DVRI DW+FCTPFG +GGR+C+AEPQDI LQN+GALPL P PPPPHTLLIPRCDGETVAT RFVCD RL+ EC D+VSVK YLGEADQDPGQAPNTATIG NGTS+SS+ A LEEF GTGVYE NLT AEV FLNVSSLTPGLDYVFWSVWEHG+GS PESNS+DFDL R QYW Sbjct: 1 MDSDGKPVGVEGSPLF-FDSDNISVSSTRRSGVYQDGLDAEEVSSVATTT-GTATTVSLVATNYLGDGNISTFEPSTLVEVGNETVRLDVRIRDWSFCTPFGRDGGRRCMAEPQDIFLQNEGALPLPPAPPPPHTLLIPRCDGETVATFRFVCDPRLV-ECADVVSVKYYLGEADQDPGQAPNTATIGVARGSGENGTSTSSSGA--LEEFWGTGVYERNLTRAEVGSFLNVSSLTPGLDYVFWSVWEHGNGSAPESNSRDFDLPRVQYW 265 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig145.3305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig145.3305.1 >prot_L-elsbetiae_contig145.3305.1 ID=prot_L-elsbetiae_contig145.3305.1|Name=mRNA_L-elsbetiae_contig145.3305.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=736bp MKAFILALLAAGHASSLRTPTVEPSENGAVGCRVVNGEANSEGHFEAVEMback to top mRNA from alignment at L-elsbetiae_contig145:48486..53213- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig145.3305.1 ID=mRNA_L-elsbetiae_contig145.3305.1|Name=mRNA_L-elsbetiae_contig145.3305.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4728bp|location=Sequence derived from alignment at L-elsbetiae_contig145:48486..53213- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig145:48486..53213- >mRNA_L-elsbetiae_contig145.3305.1 ID=mRNA_L-elsbetiae_contig145.3305.1|Name=mRNA_L-elsbetiae_contig145.3305.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4416bp|location=Sequence derived from alignment at L-elsbetiae_contig145:48486..53213- (Laminarionema elsbetiae ELsaHSoW15)back to top |