prot_L-elsbetiae_contig1449.3295.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1449.3295.1
Unique Nameprot_L-elsbetiae_contig1449.3295.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length355
Homology
BLAST of mRNA_L-elsbetiae_contig1449.3295.1 vs. uniprot
Match: A0A6H5JP61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP61_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 2.550e-66
Identity = 153/282 (54.26%), Postives = 172/282 (60.99%), Query Frame = 0
Query:   72 RMVVGAAAKLEANGVVGPGGKGGGLFNAGFVQFDGAVNFLLNEVEGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVWNQAGSVVFCTGRTEWRLNRGYQAAAMLNAGKVVFRGEVSVQDNSAAMDGGGFINETGARIVFYRGAEFLSNTATGSGGAILNHAELDFGIDDXXXXXXXXXXXXXXXXXXXXXXXXGEEDATAASFTLNFDGNYCGEQECQDIQNKDGSNIVGLHQHVPDLCDIRTQEIV 353
            R++  A A LE NGV G GG GGGL+N GFV+F     F LN      XXXXXXXX                                                     AVWNQA SVVFCT    W  N GYQA A+LNAG++VFRGEVSV+DN+A MDGGGFINE+G RI+F+ GAEFLSN  TGSGGAILNHAELDF     XXXXXXXXXXXXXXX            +T  +FTL+F  NYCGEQECQDIQNKDGS+I+GLHQ+VPDLCDI TQ+IV
Sbjct:    6 RILFDAGANLEGNGVEG-GGNGGGLWNEGFVKFGQEATFTLNXXXXXXXXXXXXXXGGLVRFEGNSTLNQNEAFDGSAFVNSAGGRVAVRQEMSITDNVSQEEASSVAGAVWNQADSVVFCTAMMSWEGNSGYQAGALLNAGRMVFRGEVSVRDNTAVMDGGGFINESGGRILFFHGAEFLSNVGTGSGGAILNHAELDFAPGGDXXXXXXXXXXXXXXX------------STTRTFTLDFQDNYCGEQECQDIQNKDGSSILGLHQYVPDLCDIGTQDIV 274          
BLAST of mRNA_L-elsbetiae_contig1449.3295.1 vs. uniprot
Match: D8LLD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD1_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 2.640e-65
Identity = 167/393 (42.49%), Postives = 194/393 (49.36%), Query Frame = 0
Query:    1 MSGPATFRGNSIQGTESNASSHGAAIYNEGTVRLRGGATFVGNSVHRSFSSSSSLPE------------GGDGGGALWNGPTGRMVVGAAAKLEANGVVGPGGKGGGLFN----------------------------AGFVQFDGAVNFLLNEVEGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVWNQAGSVVFCTGRTEWRLNRGYQAAAMLNAGKVVFRGEVSVQDNSAAMDGGGFINETGARIVFYRGAEFLSNTATGSGGAILNHAELDFGIDDXXXXXXXXXXXXXXXXXXXXXXXXGEEDATAASFTLNFDGNYCGEQECQDIQNKDGSNIVGLHQHVPDLCDIRTQEIV 353
            M+G A FR NS+Q T       G +IYN+G VRLRGGATF  N VH  +                    GGDG GALWNG  GR++  A A LE NGV G                                       G V+F+G   F  NE                                                                  AVWNQA SVVFCT    W  N GYQA A+LNAG++VFRGEVSV+DN+A MDGGGFINE+G R++F+ GAEFLSN  TGSGGAILN  ELDF               XXXXXXXXXXXXX     T  +FTL+F+ NYCGEQECQDIQNKDGS+++GLHQ+V +LCDI TQ+IV
Sbjct:  120 MNGLAIFRNNSVQATTPETPCSGGSIYNKGIVRLRGGATFADNFVHGYYXXXXXXXXXXXXXXXXXXGTGGDG-GALWNG--GRILFDAGANLEGNGVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLVRFEGTSTFSQNEA-----------------------------FDGSAFVNSAGGRVAVGQEMSIIDNVSQEDESSVAGAVWNQADSVVFCTAMVSWEGNSGYQAGALLNAGRMVFRGEVSVRDNTAVMDGGGFINESGGRVLFFHGAEFLSNVGTGSGGAILNRGELDF----------TPGGDXXXXXXXXXXXXXXXXXXTTRTFTLDFEDNYCGEQECQDIQNKDGSSVLGLHQYVSNLCDIGTQDIV 470          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1449.3295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JP61_9PHAE2.550e-6654.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLD1_ECTSI2.640e-6542.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1449contigL-elsbetiae_contig1449:1336..10050 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1449.3295.1mRNA_L-elsbetiae_contig1449.3295.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1449 646..10083 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1449.3295.1 ID=prot_L-elsbetiae_contig1449.3295.1|Name=mRNA_L-elsbetiae_contig1449.3295.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=355bp
MSGPATFRGNSIQGTESNASSHGAAIYNEGTVRLRGGATFVGNSVHRSFS
SSSSLPEGGDGGGALWNGPTGRMVVGAAAKLEANGVVGPGGKGGGLFNAG
FVQFDGAVNFLLNEVEGAGGGMFNDGGVVRFNGAAMLTENAALTGSAFVN
SAGGKVSMHGKTAIVDNLSQEEESSGSEAGAVWNQAGSVVFCTGRTEWRL
NRGYQAAAMLNAGKVVFRGEVSVQDNSAAMDGGGFINETGARIVFYRGAE
FLSNTATGSGGAILNHAELDFGIDDDDDSDSDSDGGDDGDGDDEQEGEEG
EEDATAASFTLNFDGNYCGEQECQDIQNKDGSNIVGLHQHVPDLCDIRTQ
EIVP*
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