prot_L-elsbetiae_contig14480.3294.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14480.3294.1 vs. uniprot
Match: A0A6H5KI81_9PHAE (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI81_9PHAE) HSP 1 Score: 139 bits (351), Expect = 6.530e-37 Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0 Query: 1 MSEFQVFSRELFKMPERTPAPNGCLDPRLGVSDKSAVCETCSKLLVDCAGHYGHIKLELPVFHIGYFK 68 MSEFQV+SRELFKMPER APNGCLDPRLGVSDK+AVCETCSKLLVDCAGHYGHIKLELPVFHIGYFK Sbjct: 76 MSEFQVWSRELFKMPERIAAPNGCLDPRLGVSDKTAVCETCSKLLVDCAGHYGHIKLELPVFHIGYFK 143
BLAST of mRNA_L-elsbetiae_contig14480.3294.1 vs. uniprot
Match: D7FU80_ECTSI (DNA-directed RNA polymerase subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU80_ECTSI) HSP 1 Score: 139 bits (351), Expect = 6.540e-37 Identity = 64/68 (94.12%), Postives = 66/68 (97.06%), Query Frame = 0 Query: 1 MSEFQVFSRELFKMPERTPAPNGCLDPRLGVSDKSAVCETCSKLLVDCAGHYGHIKLELPVFHIGYFK 68 MSEFQV+SRELFKMPER APNGCLDPRLGVSDK+AVCETCSKLLVDCAGHYGHIKLELPVFHIGYFK Sbjct: 78 MSEFQVWSRELFKMPERIAAPNGCLDPRLGVSDKTAVCETCSKLLVDCAGHYGHIKLELPVFHIGYFK 145
BLAST of mRNA_L-elsbetiae_contig14480.3294.1 vs. uniprot
Match: A0A7S1U7N1_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7N1_9STRA) HSP 1 Score: 116 bits (291), Expect = 9.180e-32 Identity = 50/68 (73.53%), Postives = 58/68 (85.29%), Query Frame = 0 Query: 1 MSEFQVFSRELFKMPERTPAPNGCLDPRLGVSDKSAVCETCSKLLVDCAGHYGHIKLELPVFHIGYFK 68 +SE V SR+LF MP+R PAPNGCLDPRLGVSDK +VCETC K LVDC GH+G+I+L LPVFH+GYFK Sbjct: 37 LSELHVCSRDLFTMPQRLPAPNGCLDPRLGVSDKMSVCETCGKKLVDCPGHFGYIRLNLPVFHVGYFK 104
BLAST of mRNA_L-elsbetiae_contig14480.3294.1 vs. uniprot
Match: K0SYH6_THAOC (DNA-directed RNA polymerase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SYH6_THAOC) HSP 1 Score: 109 bits (272), Expect = 2.140e-29 Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = 0 Query: 1 MSEFQVFSRELFKMPERTPAPNGCLDPRLGVSDKSAVCETCSKLLVDCAGHYGHIKLELPVFHIGYFK 68 ++EFQV SR+LF MP+R+PAPNG LDPRLGVSDK + C TC L DCAGH+G+IKL LP FHIGYFK Sbjct: 52 LAEFQVTSRDLFTMPQRSPAPNGVLDPRLGVSDKVSTCATCKLKLADCAGHFGYIKLALPCFHIGYFK 119
BLAST of mRNA_L-elsbetiae_contig14480.3294.1 vs. uniprot
Match: A0A7S3XKM9_HETAK (DNA-directed RNA polymerase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKM9_HETAK) HSP 1 Score: 108 bits (270), Expect = 7.000e-29 Identity = 48/68 (70.59%), Postives = 57/68 (83.82%), Query Frame = 0 Query: 1 MSEFQVFSRELFKMPERTPAPNGCLDPRLGVSDKSAVCETCSKLLVDCAGHYGHIKLELPVFHIGYFK 68 +SEF+V +R LF+MP R PAP G LDPRLGVSDK +VC+TC + L DCAGHYG+I+LELPVFHIGYF Sbjct: 39 LSEFEVCNRSLFQMPTRNPAPYGVLDPRLGVSDKVSVCQTCRRKLNDCAGHYGNIRLELPVFHIGYFN 106
BLAST of mRNA_L-elsbetiae_contig14480.3294.1 vs. uniprot
Match: A0A6U0UMH2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UMH2_9STRA) HSP 1 Score: 116 bits (291), Expect = 8.250e-29 Identity = 50/68 (73.53%), Postives = 58/68 (85.29%), Query Frame = 0 Query: 1 MSEFQVFSRELFKMPERTPAPNGCLDPRLGVSDKSAVCETCSKLLVDCAGHYGHIKLELPVFHIGYFK 68 MSE V SR+LF MP+R PAP GCLDPRLGVSDK ++CETC+K LVDC GH+G+IKL LPVFH+GYFK Sbjct: 31 MSELHVCSRDLFTMPQRQPAPRGCLDPRLGVSDKMSICETCNKKLVDCPGHFGYIKLHLPVFHVGYFK 98
BLAST of mRNA_L-elsbetiae_contig14480.3294.1 vs. uniprot
Match: A0A1Z5JM39_FISSO (DNA-directed RNA polymerase subunit n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JM39_FISSO) HSP 1 Score: 115 bits (288), Expect = 2.100e-28 Identity = 50/68 (73.53%), Postives = 59/68 (86.76%), Query Frame = 0 Query: 1 MSEFQVFSRELFKMPERTPAPNGCLDPRLGVSDKSAVCETCSKLLVDCAGHYGHIKLELPVFHIGYFK 68 ++EFQV SR+LF+MP RTPAP GCLDPRLGVSDK + C TC K LVDCAGH+G+IKL LPVFHIG+F+ Sbjct: 44 LAEFQVSSRDLFRMPSRTPAPGGCLDPRLGVSDKLSSCATCKKKLVDCAGHFGYIKLALPVFHIGFFR 111
BLAST of mRNA_L-elsbetiae_contig14480.3294.1 vs. uniprot
Match: A0A7S3DWI7_9STRA (DNA-directed RNA polymerase (Fragment) n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DWI7_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.280e-28 Identity = 48/68 (70.59%), Postives = 54/68 (79.41%), Query Frame = 0 Query: 1 MSEFQVFSRELFKMPERTPAPNGCLDPRLGVSDKSAVCETCSKLLVDCAGHYGHIKLELPVFHIGYFK 68 ++EFQV SRELF MP RTPA GCLDPRLGVSDK + C TC K L DCAGH+G IKL LPVFHIG+ + Sbjct: 56 LAEFQVTSRELFSMPSRTPAHGGCLDPRLGVSDKVSTCTTCKKKLTDCAGHFGFIKLALPVFHIGFMR 123
BLAST of mRNA_L-elsbetiae_contig14480.3294.1 vs. uniprot
Match: A0A1E7FAF7_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAF7_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.700e-27 Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = 0 Query: 1 MSEFQVFSRELFKMPERTPAPNGCLDPRLGVSDKSAVCETCSKLLVDCAGHYGHIKLELPVFHIGYFK 68 ++EFQV SRELF MP R PAP GCLDPRLGVSDK + C TC + LVDCAGH+G+I+L LPVFHIGY + Sbjct: 44 LAEFQVTSRELFSMPSRNPAPGGCLDPRLGVSDKISTCATCKRKLVDCAGHFGYIRLALPVFHIGYIR 111
BLAST of mRNA_L-elsbetiae_contig14480.3294.1 vs. uniprot
Match: A0A448Z7A2_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7A2_9STRA) HSP 1 Score: 110 bits (276), Expect = 8.760e-27 Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 0 Query: 1 MSEFQVFSRELFKMPERTPAPNGCLDPRLGVSDKSAVCETCSKLLVDCAGHYGHIKLELPVFHIGYFK 68 ++EFQV SRELF MP R PAP GCLDPRLGVSDK + C TC K L DCAGH+G+I+L LPVFHIGY + Sbjct: 51 LAEFQVTSRELFSMPSRNPAPGGCLDPRLGVSDKVSTCHTCKKKLQDCAGHFGYIRLALPVFHIGYLR 118 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14480.3294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_L-elsbetiae_contig14480.3294.1 ID=prot_L-elsbetiae_contig14480.3294.1|Name=mRNA_L-elsbetiae_contig14480.3294.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=68bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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