prot_L-elsbetiae_contig14466.3290.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14466.3290.1
Unique Nameprot_L-elsbetiae_contig14466.3290.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length417
Homology
BLAST of mRNA_L-elsbetiae_contig14466.3290.1 vs. uniprot
Match: D8LDS4_ECTSI (Pseudouridylate synthase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS4_ECTSI)

HSP 1 Score: 374 bits (959), Expect = 1.390e-119
Identity = 261/437 (59.73%), Postives = 278/437 (63.62%), Query Frame = 0
Query:    1 REYTYYLPKALLPNDEALEKFRGLLKFFVGTHSFHNYASTKGRQLKEVRKRVQASIDLKKAGGAPP-----ATAGXXXXXXXXXXXXXDGXXXXXXXXXXXESGSKKRWLSKEEWRTHRHKKKSAVDQKADDAWFGKLAADAPSDAA---------------TGAEQGQPGGGGDAQPLGAXXXXXXXXXXAEPK-LVDAGKGEGLAAPGQQQSVVEQGAAGNVGGVDAAAPAXXXXXXXXXXXXXXXTGMDMDAGGAVGAAVEGGGDPGKGDAAAAXXXXXXXAAGEXXXXXXXXXXXADEGPEKQILLRELRTSIYRCEALDGIVSYTRPGQDTPDEFVRIDIRGKAFVYNQIRLMIGGALGEARGDLMPGFVEAALKTPYKLRVPLAPAEGLVLESQAFTRHTNALVLDPQDLSSIGGTLAVWGESKQGNSMQV 416
            REYTYYLP+ LLP+DEAL KFR LLK FVGTHSFHNYASTKGRQLKEVRKRV+ASIDLKK+GG P      A  G          XXX  XXXXXXXXXXX     +RW+SK+EWRT+R+KKKSA DQKADDAWFGK                          GAEQ      GD  P  A           +     DAG    +AA    + V   G      G    +  XXXXXXXXXXXXXX  G    AG                              GE            DEGPEKQILLRELRTSIYRCEALDGIVSYTRPGQDTPDEFVRIDIRGKAFVYNQIRLMIGGALGEARGDL  GFVEAALKTPYKLRVPLAPAEGLVLESQAFTRHTNALVLDP+DL SIGGTLAVWGESK+GN+M+ 
Sbjct:  154 REYTYYLPRELLPDDEALGKFRELLKLFVGTHSFHNYASTKGRQLKEVRKRVKASIDLKKSGGKPAPGPEKAAGGAVSVSAPGSEXXXXXXXXXXXXXXXXXXXXXRRWVSKDEWRTYRYKKKSAADQKADDAWFGKXXXXXXXXXXXXXXXXXXXXXXXXXAGAEQQA---SGDEGPESASPRSIEGGTSGDAVGSADAGSAAAVAAAVTPKDVAGAGGXXXAEGAVVKSDGXXXXXXXXXXXXXXAPGAQEAAG----------------------------VGGE------------DEGPEKQILLRELRTSIYRCEALDGIVSYTRPGQDTPDEFVRIDIRGKAFVYNQIRLMIGGALGEARGDLWSGFVEAALKTPYKLRVPLAPAEGLVLESQAFTRHTNALVLDPRDLGSIGGTLAVWGESKEGNAMKT 547          
BLAST of mRNA_L-elsbetiae_contig14466.3290.1 vs. uniprot
Match: A0A6H5L6M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M3_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 3.640e-39
Identity = 106/136 (77.94%), Postives = 116/136 (85.29%), Query Frame = 0
Query:    1 REYTYYLPKALLPNDEALEKFRGLLKFFVGTHSFHNYASTKGRQLKEVRKRVQASIDLKKAGGAPPATAGXXXXXXXXXXXXXDGXXXXXXXXXXXESGSKKR-WLSKEEWRTHRHKKKSAVDQKADDAWFGKLAA 135
            REYTYYLP+ LLP+D +L KFR LLK FVGTHSFHNYASTKGRQLKEVRKRV+ASIDLKK+GG P   AG   XXXXXXXXXX    XXXXXXXXXESGSKKR W+SK+EWRT+R+KKKS  DQKADDAWFGK +A
Sbjct:  233 REYTYYLPRELLPDDGSLGKFRELLKLFVGTHSFHNYASTKGRQLKEVRKRVKASIDLKKSGGKPAQEAGGTAXXXXXXXXXXX---XXXXXXXXXESGSKKRRWVSKDEWRTYRYKKKSTADQKADDAWFGKQSA 365          
BLAST of mRNA_L-elsbetiae_contig14466.3290.1 vs. uniprot
Match: A0A835YLA7_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLA7_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 7.070e-19
Identity = 55/130 (42.31%), Postives = 82/130 (63.08%), Query Frame = 0
Query:  281 EGPEKQILLRELRTSIYRCEALDGIVSYTRPGQDTPDEFVRIDIRGKAFVYNQ------IRLMIGGALGEARGDLMPGFVEAALKTPYKLRVPLAPAEGLVLESQAFT--RHTNALVLDPQDLSSIGGTL 402
            EG   + +++E+ +SIYR E     +S       +P+ F+R+++RG++F+YNQ      IRLM+G AL EA G +  G+V A L+TP  L  PL P +GL+L SQ FT  +  NA VL+P+ LS +GGT+
Sbjct:  303 EGVVMRNIMKEMTSSIYRMELEGAPLSVG----GSPEPFLRVNVRGQSFLYNQSFLYDQIRLMVGAALAEANGVVPAGWVAAGLETPCTLHFPLVPPQGLLLVSQGFTASKSGNAAVLEPKHLSEVGGTV 428          
BLAST of mRNA_L-elsbetiae_contig14466.3290.1 vs. uniprot
Match: A0A7S3Y6P6_HETAK (tRNA pseudouridine synthase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6P6_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 2.590e-16
Identity = 47/120 (39.17%), Postives = 73/120 (60.83%), Query Frame = 0
Query:  284 EKQILLRELRTSIYRCEALDGIVSYTRPGQDTPDEFVRIDIRGKAFVYNQIRLMIGGALGEARGDLMPGFVEAALKTPYKLRVPLAPAEGLVLESQAFTRHTNALVLDPQDLSSIGGTLA 403
            E++++++E+  ++  C   D I      GQ    +FVR+ IRG++F+YNQIRLM+GGA+  A   L       AL +PY + +P+APA GLVL +QAF R+ NA+++D   +    G  A
Sbjct:    6 EERMIMKEMSCNMLSCTTDDPI---ELEGQ----KFVRVFIRGQSFLYNQIRLMVGGAIATATEVLPETAFWMALNSPYLVPIPVAPATGLVLVNQAFARYANAVLMDAAGVGQALGPRA 118          
BLAST of mRNA_L-elsbetiae_contig14466.3290.1 vs. uniprot
Match: W7U6V3_9STRA (Pseudouridylate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6V3_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 5.020e-12
Identity = 46/111 (41.44%), Postives = 63/111 (56.76%), Query Frame = 0
Query:  286 QILLRELRTSIYRCEALDGIVSYTRPGQDTPDEFVRIDIRGKAFVYNQIRLMIGGALGEARGDLMPGFVEAALKTPYKLRVPLAPAEGLVLESQAFTRHT-NALVLDPQDL 395
            Q +L+ +RT+IYRCE         R  Q    +FV +   G +F+YNQIRL++GGA+  A G      +  AL +PY +  PLAPAEGL L    F R + N +V+D  DL
Sbjct:  478 QGVLKMVRTNIYRCEG--------RALQVGGKDFVAVTFHGSSFLYNQIRLLVGGAIAVASGLFPEAALPMALDSPYLIYSPLAPAEGLFLRHITFGRKSKNPVVMDEADL 580          
BLAST of mRNA_L-elsbetiae_contig14466.3290.1 vs. uniprot
Match: A0A7J6LUF7_PEROL (Adenylyl cyclase-associated protein n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LUF7_PEROL)

HSP 1 Score: 75.1 bits (183), Expect = 1.110e-10
Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 0
Query:  283 PEKQILLRELRTSIYRCEALDGIVSYTRPGQDTPDEFVRIDIRGKAFVYNQIRLMIGGALGEARGDLMPGF--VEAALKTPYKLRVPLAPAEGLVLESQAFT 382
            P  Q+LL +  ++I+   A       T    D  +++VR+D+RG+ F+YNQIRLMIGGA+  ARG + P    ++ A+ T YK   PLAPA GL+L +  FT
Sbjct: 1533 PRLQVLLDQCNSAIHSFTA-------TPLEMDGGEKWVRVDVRGQFFLYNQIRLMIGGAIAYARG-VFPSISCIQFAVDTNYKFHSPLAPACGLILHTSGFT 1626          
BLAST of mRNA_L-elsbetiae_contig14466.3290.1 vs. uniprot
Match: A0A7J6TLF6_PEROL (Adenylyl cyclase-associated protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6TLF6_PEROL)

HSP 1 Score: 74.7 bits (182), Expect = 1.510e-10
Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 0
Query:  283 PEKQILLRELRTSIYRCEALDGIVSYTRPGQDTPDEFVRIDIRGKAFVYNQIRLMIGGALGEARGDLMPGF--VEAALKTPYKLRVPLAPAEGLVLESQAFT 382
            P  Q+LL +  ++I+   A       T    D  +++VR+D+RG+ F+YNQIRLMIGGA+  ARG + P    ++ A+ T YK   PLAPA GL+L +  FT
Sbjct: 2098 PRIQVLLDQCNSAIHSFTA-------TPLEMDGGEKWVRVDVRGQFFLYNQIRLMIGGAIAYARG-VFPSISCIQFAVDTNYKFHSPLAPACGLILHTSGFT 2191          
BLAST of mRNA_L-elsbetiae_contig14466.3290.1 vs. uniprot
Match: A0A6G0WDH2_9STRA (PseudoU_synth_1 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDH2_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.770e-10
Identity = 50/120 (41.67%), Postives = 66/120 (55.00%), Query Frame = 0
Query:  281 EGPEKQILLRELRTSIYRCEALDGIVSYTRPGQDTPDEFVRIDIRGKAFVYNQIRLMIGGALGEARGDLMPGFVEAALKTPYKLRVPLAPAEGLVLESQAF--TRHTNALVLD---PQDL 395
            E  E++IL R  RT IY C         T       + F+ I +RG +F+ NQIRLM+G  LG A G L     +AALKT   +R+P APAEGLVL + AF   +H  + + D   PQ+L
Sbjct:  261 ESGERKILTRHRRT-IYTCRG-------TLLPDVNGEPFICIRLRGASFLLNQIRLMVGAVLGVASGALPLDMFDAALKTNQIVRLPTAPAEGLVLSTCAFGSKQHLISFIKDHNTPQNL 372          
BLAST of mRNA_L-elsbetiae_contig14466.3290.1 vs. uniprot
Match: A0A3F2RKM1_9STRA (PseudoU_synth_1 domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RKM1_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.920e-10
Identity = 49/115 (42.61%), Postives = 64/115 (55.65%), Query Frame = 0
Query:  280 DEGPEKQILLRELRTSIYRCEALDGIVSYTRPGQDTPDEFVRIDIRGKAFVYNQIRLMIGGALGEARGDLMPGFVEAALKTPYKLRVPLAPAEGLVLESQAF--TRHTNALVLDP 392
            +EG  +++L R  R SIY C         T     +  +F+R+ I G+AF+ NQIR MIGGAL  A   +     +AAL T   +RVP+APAEGLVL S  F    HT +L  DP
Sbjct:  294 EEGLTRKLLPRH-RRSIYSCTG-------TLISDFSGKQFLRVHIVGQAFLLNQIRCMIGGALAVATKGMSRTAFDAALSTNRIVRVPIAPAEGLVLLSSTFGGKLHTVSLYEDP 400          
BLAST of mRNA_L-elsbetiae_contig14466.3290.1 vs. uniprot
Match: A0A7J6RNU0_PEROL (Uncharacterized protein n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RNU0_PEROL)

HSP 1 Score: 71.6 bits (174), Expect = 4.370e-10
Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 0
Query:  314 DTPDEFVRIDIRGKAFVYNQIRLMIGGALGEARGDLMPGF--VEAALKTPYKLRVPLAPAEGLVLESQAFT 382
            D  +++VR+D+RG+ F+YNQIRLMIGGA+  ARG + P    ++ A+ T YK   PLAPA GL+L +  FT
Sbjct:    2 DGGEKWVRVDVRGQFFLYNQIRLMIGGAIAYARG-VFPSISCIQFAVDTTYKFHSPLAPACGLILHTSGFT 71          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14466.3290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDS4_ECTSI1.390e-11959.73Pseudouridylate synthase, putative n=1 Tax=Ectocar... [more]
A0A6H5L6M3_9PHAE3.640e-3977.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLA7_9STRA7.070e-1942.31Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S3Y6P6_HETAK2.590e-1639.17tRNA pseudouridine synthase (Fragment) n=1 Tax=Het... [more]
W7U6V3_9STRA5.020e-1241.44Pseudouridylate synthase n=2 Tax=Monodopsidaceae T... [more]
A0A7J6LUF7_PEROL1.110e-1042.16Adenylyl cyclase-associated protein n=3 Tax=Perkin... [more]
A0A7J6TLF6_PEROL1.510e-1042.16Adenylyl cyclase-associated protein n=1 Tax=Perkin... [more]
A0A6G0WDH2_9STRA2.770e-1041.67PseudoU_synth_1 domain-containing protein n=1 Tax=... [more]
A0A3F2RKM1_9STRA3.920e-1042.61PseudoU_synth_1 domain-containing protein n=4 Tax=... [more]
A0A7J6RNU0_PEROL4.370e-1050.70Uncharacterized protein n=3 Tax=Perkinsus olseni T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 314..379
e-value: 2.0E-6
score: 28.2
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3D3.30.70.660coord: 1..62
e-value: 8.4E-7
score: 30.6
coord: 293..398
e-value: 1.4E-14
score: 56.0
NoneNo IPR availablePANTHERPTHR11142:SF9TRNA PSEUDOURIDINE SYNTHASE-RELATEDcoord: 1..385
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 1..385
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 316..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14466contigL-elsbetiae_contig14466:211..4241 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14466.3290.1mRNA_L-elsbetiae_contig14466.3290.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14466 211..4241 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14466.3290.1 ID=prot_L-elsbetiae_contig14466.3290.1|Name=mRNA_L-elsbetiae_contig14466.3290.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=417bp
REYTYYLPKALLPNDEALEKFRGLLKFFVGTHSFHNYASTKGRQLKEVRK
RVQASIDLKKAGGAPPATAGAGSSTAPPGSDTADGEGGGGGGGGAGESGS
KKRWLSKEEWRTHRHKKKSAVDQKADDAWFGKLAADAPSDAATGAEQGQP
GGGGDAQPLGAAAAAAAAVAAAEPKLVDAGKGEGLAAPGQQQSVVEQGAA
GNVGGVDAAAPAAASAVPAAAAVAATATGMDMDAGGAVGAAVEGGGDPGK
GDAAAAEAKGEGEAAGEAGKEGGGGGGGADEGPEKQILLRELRTSIYRCE
ALDGIVSYTRPGQDTPDEFVRIDIRGKAFVYNQIRLMIGGALGEARGDLM
PGFVEAALKTPYKLRVPLAPAEGLVLESQAFTRHTNALVLDPQDLSSIGG
TLAVWGESKQGNSMQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR020095PsdUridine_synth_TruA_C
IPR001406PsdUridine_synth_TruA
IPR020103PsdUridine_synth_cat_dom_sf