mRNA_L-elsbetiae_contig14465.3289.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14465.3289.1
Unique NamemRNA_L-elsbetiae_contig14465.3289.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig14465.3289.1 vs. uniprot
Match: A0A6H5KZV7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV7_9PHAE)

HSP 1 Score: 533 bits (1373), Expect = 2.260e-173
Identity = 263/422 (62.32%), Postives = 311/422 (73.70%), Query Frame = 3
Query:   63 QVLAALMYSRNPPGMWFINPQQWVIHHMFHPASIWDIPLVKPRFGCALDMSLAVKGYDMANALEAQLNRFILGGSCDAGFIDMQHTYLKPKANIEFGFPTGREMPSIIEAKLWVSVVFYAVGNASPMLLDASISSVLARFPEAAEVVVVFTEEPAIRDVLN-VVKAHSKNAPFPVEVFEEDGPVHLPR-GGWPGWSGLHVDDYTSGEFVMQLEVGDILVEDVAYDNIFHFRKPVIPFVRLSSEGGEAFDSPDAAAEAYQDTYIACGIEAVIETVAVRDFALLRGLVYPRHAYSELRMFASEVHNVDIDGLVEQAHKSCEGIVMADGSPIGPRVGRGVFEASLLGSFIWHFFPDMVHWRALDPLDIQPDEWLSDIGKYNIWCSMGYLKGPEDGDSAKERAKALKKTNSRAACNSFVNSSRTDR 1322
            +VLAAL YS N PG+WFINPQQWV HHMF  ASIWDIPLVKPRFGCA D+S+A +GYD+A ALE  L  F+ G +C+ GFI + H  LKPK NIEFG+PTGREMPSI + +L VSV+F      SP LLDASI SV ARFPEAAEVVVVFTE PA R  L  ++K  S++APFPVE  EEDGP+ +   GGWPGWSGL  DDY SG+FVMQL+ GD+LV DV YDNIFHF KPVIPF RL+   G       A+  +  D YIAC IE+VIE   VRDFAL+RGLVYP  A++E+R+FASEVHNVD+D LV QAH SC  +V  +G+P+G  V RG FEASLLGSF+W F PD VHWRALDPLD+QPDEW+SD+GKYN+ C +G+L  P D   A+E    LK  +SR AC+ F+   R  R
Sbjct:  900 EVLAALAYSLNEPGLWFINPQQWVTHHMFQQASIWDIPLVKPRFGCAFDISMAAQGYDVAAALETHLGHFMSGSACERGFIPLDHASLKPKPNIEFGYPTGREMPSISKLRLRVSVIFCVGRGVSPTLLDASILSVEARFPEAAEVVVVFTEPPAKRAALREILKIRSESAPFPVEAIEEDGPIGVSTDGGWPGWSGLRADDYASGDFVMQLDAGDLLVTDVTYDNIFHFGKPVIPFKRLALGIGGG-SGGWASTGSLTDKYIACAIESVIEMEVVRDFALIRGLVYPTSAFTEMRIFASEVHNVDVDDLVGQAHGSCRRVVRNNGAPVGASVHRGTFEASLLGSFMWRFMPDSVHWRALDPLDVQPDEWMSDVGKYNLLCPLGHLDVPNDKRGAREMGTRLKGIDSRGACDQFLRHVRLSR 1320          
BLAST of mRNA_L-elsbetiae_contig14465.3289.1 vs. uniprot
Match: A0A6H5K6N3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6N3_9PHAE)

HSP 1 Score: 447 bits (1151), Expect = 6.020e-141
Identity = 227/386 (58.81%), Postives = 275/386 (71.24%), Query Frame = 3
Query:   63 QVLAALMYSRNPPGMWFINPQQWVIHHMFHPASIWDIPLVKPRFGCALDMSLAVKGYDMANALEAQLNRFILGGSCDAGFIDMQHTYLKPKANIEFGFPTGREMPSIIEAKLWVSVVFYAVGNASPMLLDASISSVLARFPEAAEVVVVFTEEPAIRDVL-NVVKAHSKNAPFPVEVFEE-DGPVHLPRGGWPGWSGLHVDDYTSGEFVMQLEVGDILVEDVAYDNIFHFRKPVIPFVRLSSEGGEAFDSPDAAAEAYQDTYIACGIEAVIETVAVRDFALLRGLVYPRHAYSELRMFASEVHNVDIDGLVEQAHKSCEGIVMADGSPIGPRVGRGVFEASLLGSFIWHFFPDMVHWRALDPLDIQPDEWLSDIGKYNIWCSMGYL 1214
            +VLA+  YSRN  G+ FINP+QWV HHMF  ASIWDIPLVKPRF C +D+S+AVKGYD+A ALE QL+ F+ G SC  G I +    L PK  IEFG+PTG++MPSI    L VSVVFY   +A+P LLDASISSV  RFPEA EVVVVFTE P  R  L +V+ A+    PF VEV +E DG  H   G    WSGL  DD++SG+FVMQLEVGDIL+ DV Y+N+F+F KPVIP+ RLS  GG+  DSP  A  +  D Y+ACGIEA+++T  VRDFA+L+GLVYPR AYSE+R F ++VH VD+D L E  H  C G +        P + R + E SLL SF+W F PDM+HWRALDP DI+PDEWL D+GKYNIWCS+G L
Sbjct:  883 EVLASFAYSRNAAGLRFINPRQWVTHHMFQKASIWDIPLVKPRFSCVIDISMAVKGYDVAAALEEQLSHFVSGTSCAWGSIHLDPALLLPKTGIEFGYPTGKDMPSISTLNLRVSVVFYLGRSANPTLLDASISSVAVRFPEAFEVVVVFTEPPIERSGLEDVLNAYIDEVPFAVEVMQEVDGSAHSLIGSRSRWSGLQADDHSSGQFVMQLEVGDILMSDVTYENLFYFGKPVIPYKRLSL-GGDV-DSP--AGGSIMDKYLACGIEAIVDTHEVRDFAVLKGLVYPRAAYSEMRQFVNDVHGVDVDNLTELVHGRCRGALGKSVLGDPPPIRRWILETSLLASFVWRFMPDMIHWRALDPSDIEPDEWLLDVGKYNIWCSLGSL 1264          
BLAST of mRNA_L-elsbetiae_contig14465.3289.1 vs. uniprot
Match: D7FWG7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWG7_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 7.290e-53
Identity = 142/455 (31.21%), Postives = 217/455 (47.69%), Query Frame = 3
Query:   36 QLTQQINAWQVLAALMYSRNPPGMWFINPQQWVIHHMFHPASIWDIPLVKPRFGCALDMSLAVKGYDMANALEAQLNRFILGGSCDAGFIDMQHTYLKPKANIEFGFPTGRE-----------MPSIIEAKLWVSVVFYAV-GNASPMLLDASISSVLARFPEAAEVVVVFTEEPAIRDVLNVVKAHSKNAPFPVEVFEE----DGPVHLPRGGWPGWSGLHVDDYTSGEFVMQLEVGDILVEDVAYDNIFHFRKPVIPFVRLSSEGGEAFDSPDAAAEAYQDTYIACGIEAVIETVAVRDFALLRGLVYPRHAYSELRMFASEVHNVDIDGLVEQAHKSC-------------EGIVMADGSPIGPRV-----GRGVFEASLLGSFIWHFFPDMVHWRALDPLDIQPDEWLSDIGKYNIWCSMGYLKGPEDGDSAKERAKALKKTNSRAACNSF 1298
            QL + +   ++LA L Y+RN  G+ F NP QW   H+F   S+WDIPLVKP F CALD++L+++G D+A  +   ++ F  G SC+ GF  M   +L  K + EFG  T R+           MPS+ +    +SV+F    G+A  +L + ++ +V   FP+A EVVVV  EE        ++K H   APFP+ V  E    DG  H+ +     +S L  D Y  G+F++ L+   +L E + YD+IFH+ KPV+PF R   E          +A   + T  A G + V       +F++    VYPR  Y  +R F +E H +     +      C             + ++++D + +G  +     GR         S   +  PD +HW A DP D+Q DEW  D+ +Y   C       PED    ++  + L   ++   C  F
Sbjct:  180 QLQKNVFIPELLAGLSYARNTEGVSFHNPAQWTHDHIFKEKSVWDIPLVKPHFSCALDINLSLQGLDVAEQIGNLVDSFRRGASCELGFEKMHKKHLNTKPHWEFGPLTSRDPTENERRKLERMPSLKDYH--ISVMFRTFFGDA--VLFNVALPTVARYFPDAKEVVVV-VEESDGELFEEIIKPHQNTAPFPIRVVTEPDIMDG--HIQQK----YSKLRADLYCEGDFILHLDSDVVLFEPLTYDHIFHWGKPVLPFRRYREE---IITGQQLSACWRKGTSFAIGEDVV------HEFSIFNTHVYPRKMYPAIRDFIAERHGIPFKEFMASRRGKCMSVKTLKKWTLEEQTLLLSDFNLMGAYLCVTCLGRTHSVRGASSSTSRYHMPDEMHWMATDPYDMQVDEWRRDVTRYAWVCQANGRHVPEDKPGEEQYIRGLLSISNFNECVGF 614          
BLAST of mRNA_L-elsbetiae_contig14465.3289.1 vs. uniprot
Match: A0A6H5KID1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KID1_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 1.040e-49
Identity = 123/396 (31.06%), Postives = 198/396 (50.00%), Query Frame = 3
Query:   51 INAWQVLAALMYSRNPPGMWFINPQQWVIHHMFHPASIWDIPLVKPRFGCALDMSLAVKGYDMANALEAQLNRFILGGSCDAGFIDMQHTYLKPKANIEFGFPTGRE-MPSIIEAKLWVSVVFYAVGNASPMLLDASISSVLARFPEAAEVVVVFTEEPAIRDVLNVVKAHSKNAPFPVEVFEEDGPVHLPRGGWPGWSGLHVDDYTSGEFVMQLEVGDILVEDVAYDNIFHFRKPVIPFVRLSSEGGEAFDSPDAAAEAYQDTYIACGIEAVIETVAVRDFALLRGLVYPRHAYSELRMFASEVHNVDIDGLVEQAHKSCEGIVMADGSPIGPRVGRGVF--EASLLGSFIWHFFPDMVHWRALDPLDIQPDEWLSDIGKYNIWCSMGYLKGPED 1229
            IN  +VLAAL YSR+PPG+ F+N  +W   ++F  ASIWD+P+VKPRFGC+LD SL  +GYDM      +L    LG SC+ GF  ++ + L  K N +       + +P  ++  + V    + VG+A   L +ASI++V+     A EVVVV  E   +    ++V+     APFP+ V  E  P  +       +S L  D YT G++++ L+   ++ +DV++ ++FH  KPV+PF R        ++      E  +      G  + I    + DF +    +YPR  Y   R F  + + +     +     SC   +  D      +  R +   +++ +G+++W+   D VHW A+DP D +P +W  D+ K    C +     PED
Sbjct:  366 INIPEVLAALAYSRSPPGVTFVNMNEWSHQNLFSEASIWDVPMVKPRFGCSLDRSLGNQGYDMGEIFAKELEALKLGASCEQGFKAVEVSSLDVKVNRQLSVQGAEQKVPKSLDYDVTVMYRTF-VGDAK--LFNASIATVIEHVSSAFEVVVVVVEAD-VGLFESIVQPFRIVAPFPIRVIGE--PELMDGKLQQKYSKLRADLYTEGDYILHLDSDAVVFQDVSFAHMFHLGKPVLPFRR--------YEKNRRLEEWTEAMCWESGTSSAIGEDVIHDFGVSNIHLYPRSMYPAAREFIEQHNGMPFVDFMASRRGSC---MNPDTETDRTQDERSLMFSDSNFIGAYLWYHMHDAVHWLAVDPRDARPGDWRPDLRKLERVCQVNRRCAPED 744          
BLAST of mRNA_L-elsbetiae_contig14465.3289.1 vs. uniprot
Match: A0A6H5L0V3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V3_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 3.650e-49
Identity = 128/397 (32.24%), Postives = 199/397 (50.13%), Query Frame = 3
Query:   63 QVLAALMYSRNPPGMWFINPQQWVIHHMFHPASIWDIPLVKPRFGCALDMSLAVKGYDMANALEAQLNRFILGGSCDAGFIDMQHTYLKPKANIEFGFPTGREMPSIIEAKLWVSVVFYAVGNASPMLLDASISSVLARFPEAAEVVVVFTE-EPAIRDVLNVVKAHSKNAPFPVEVFEEDGPVHLPRGGWPGWSGLHVDDYTSGEFVMQLEVGDILVEDVAYDNIFHFRKPVIPFVRLSSEGG-EAFDSPDAAAEAYQDTYIAC---GIEAVIETVAVRDFALLRGLVYPRHAYSELRMFASEVHNVDIDGLVEQAHKSCEGIVMADGSPIGPRVGRGVF-EASLLGSFIWHFFPDMVHWRALDPLDIQPDEWLSDIGKYNIWCSMGYLKGPEDGD 1235
            +VLAAL Y + P  + F+N + W   ++F   SIWDIP+VKPRFGC+ D +L++ GY M + +  +L  F  G  C+ GF  ++ + L+ K + EFG   G  +P    A   +SV+ Y   +    L + SI++V+ RFP A EVV V  E + A+ +   +VK     APFP+ V  E  P  +       +S L  D YT G++++ ++   ++ ED+ Y +IFH RKPV+PF R  +E G E              T I C   G    I    V +F++    VYPR  Y   R F  + H +     +     SC  +   + + +     R +F + + +G+++W+   D V+W A DP D +PD+W  DI +Y   C       P D +
Sbjct:  508 EVLAALAYLQMPGEVHFVNIRAWSRENLFSVPSIWDIPMVKPRFGCSFDTALSLMGYRMDDFIANELEAFKWGAKCELGFKSVKASDLEVKVDWEFG-AEGANVPVRKLAGCNISVM-YRTFSGDARLFNMSIATVIERFPSALEVVAVVVEADVALFE--GIVKPLRATAPFPIRVVAE--PQLMDGNIQQKYSKLRADLYTKGDYILHMDSDVVMFEDLTYRHIFHLRKPVLPFRRYRNETGVEGL------------TTIMCWQNGTSFAIGEDVVHEFSIFNTHVYPRSMYPAARTFIEQHHGMAFVDFMSTRRGSC--LHPNNMAKLTMDERRLMFSDFNYMGAYLWYHMHDAVYWLAADPYDTRPDDWRPDIIQYAWVCQANGRHVPSDAE 884          
BLAST of mRNA_L-elsbetiae_contig14465.3289.1 vs. uniprot
Match: D7FRS3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRS3_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 3.280e-45
Identity = 129/416 (31.01%), Postives = 194/416 (46.63%), Query Frame = 3
Query:   63 QVLAALMYSRNPPGMWFINPQQWVIHHMFHPASIWDIPLVKPRFGCALDMSLAVKGYDMANALEAQLNRFILGGSCDAGFIDMQHTYLKPKANIEFGFPTGREMPSIIEAKLWVSVVFYAVGNASPMLLDASISSVLARFPEAAEVVVVFTE-EPAIRDVLNVVKAHSKNAPFPVEVFEEDGPVHLPRGGWPGWSGLHVDDYTSGEFVMQLEVGDILVEDVAYDNIFHFRKPVIPFVRLSSEGGEAFDSPDAAAEAYQDTYIACGIEAVIETVAVRDFALLRGLVYPRHAYSELRMFASEVHNVDIDGLVEQAHKSC-EGIVMADGSPIGPRVGRGVFEASLLGSFIWHFFPDMVHWRALDPLDIQPDEWLSDIGKYNIWCSMGYLKGPEDGDSAKERAKALKKTNSRAACNSFVN 1304
            +VLAAL YSR+P G+ F+N ++W   H+F   SIWDIP+VKPRFGC+ D SL   GYD+   +  +L  F LG SC+ GF  +  + L  KA+ E G    +  P++ +  +    V Y        +   SI++V+     A EVVVV  E + A+ +  ++V+       FP+ V  E  P  +       +S L  D YT GE+V+ L+   ++ EDV   ++FH   PV PF R   E  E  +           T  A G     E VA  +F++    VYPR  Y   R F  + H +     +     SC     MA+ +     +    F    +G+++W+  PD VHW A+D +  QPD     +GK+   C       P D    ++     +K  S   CN+  +
Sbjct:  521 EVLAALAYSRSPRGVTFVNIREWSHEHLFSEDSIWDIPMVKPRFGCSFDTSLTRDGYDVGGMIAKELEGFKLGASCERGFKSVDRSKLDLKADRELGDEGEQGTPTLQDYHI---AVMYRTCARDAKIFSTSIATVIEHLSGAFEVVVVVVEADVALFE--SIVQPLRTAVTFPIRVIGE--PELMDGNVQQAYSKLRADLYTEGEYVLHLDSDAVVFEDVTPAHVFHDGMPVQPFRRYREE--ETLEGWATTLCWQNGTSFAVG-----EDVA-HEFSIFNAHVYPRSMYPAAREFIEQRHGMSFVDFLATRRGSCMHPNTMAEWTADERAMMFSGFN--FIGAYLWYHMPDAVHWLAMDSVGTQPD-----LGKFEWVCKANRRYAPADPAELEQYEADYRKITSIDECNAVTS 914          
BLAST of mRNA_L-elsbetiae_contig14465.3289.1 vs. uniprot
Match: D7FKL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKL9_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 8.850e-42
Identity = 109/324 (33.64%), Postives = 167/324 (51.54%), Query Frame = 3
Query:   51 INAWQVLAALMYSRNPPGMWFINPQQWVIHHMFHPASIWDIPLVKPRFGCALDMSLAVKGYDMANALEAQLNRFILGGSCDAGFIDMQHTYLKPKANIEFGFPTGRE-MPSIIEAKLWVSVVFYAVGNASPMLLDASISSVLARFPEAAEVVVVFTEEPAIRDVLNVVKAHSKNAPFPVEVFEEDGPVHLPRGGWPGWSGLHVDDYTSGEFVMQLEVGDILVEDVAYDNIFHFRKPVIPFVRLSSEGGEAFDSPDAAAEAYQDTYIAC---GIEAVIETVAVRDFALLRGLVYPRHAYSELRMFASEVHNVDIDGLVEQAHKSC 1010
            IN  +VLAAL YSR+PPG+ F+N  +W   ++F  ASIWD+P+VKPRFGC+ D SL  +GYDM   L  +L  F LG SC+ GF  ++ + L  KAN +       + +P  ++  + V    + VG+A   L +ASI++V+     A EVVVV  E   +    ++V+     APFP+ V  E  P  +       +S L  D YT G++++ L+   ++ +D+++ ++FH  KPV+PF R  +   E +            T   C   GI + I    + DF +L   +YPR  Y   R F  + H +     +     SC
Sbjct:  604 INIPEVLAALAYSRSPPGVTFVNMNEWSHQNLFSEASIWDVPMVKPRFGCSFDRSLGNQGYDMGEILAKELEAFKLGASCERGFKAVEVSSLSVKANRQLSVQRAEQKVPKFLDYDVTVMYRTF-VGDAK--LFNASIATVIEHVSSAFEVVVVVAEAD-VGFFESIVQPFRIAAPFPIRVIGE--PELMDGKLQQKYSKLRADLYTEGDYILHLDSDAVVFQDLSFAHMFHLGKPVLPFRRYENRRLEGW------------TETMCWESGISSAIGEDRIHDFGVLNTHLYPRSMYPAAREFIEQHHGMPFVDFMASRRGSC 909          
BLAST of mRNA_L-elsbetiae_contig14465.3289.1 vs. uniprot
Match: A0A6H5KL81_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL81_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 9.290e-39
Identity = 94/238 (39.50%), Postives = 135/238 (56.72%), Query Frame = 3
Query:  102 GMWFINPQQWVIHHMFHPASIWDIPLVKPRFGCALDMSLAVKGYDMANALEAQLNRFILGGSCDAGFIDMQHTYLKPKANIEFGFP-TGREMPSIIEAKLWVSVVFYAVGNASPMLLDASISSVLARFPEAAEVVVVFTEEPA--IRDVLNVVKAHSKNAPFPVEVFEE----DGPVHLPRGGWPGWSGLHVDDYTSGEFVMQLEVGDILVEDVAYDNIFHFRKPVIPFVRLSSEGGE 794
            G+ F++   W   ++F  ASIWDIPL++PRFGCA D SL++KGYDMA+ +  +L  F  G SC+ GF  ++ + L  KA+ EFG   T + MPS+ +    V+V++  V    P L   SI++V+  FP A EVVVV  +        ++N  +A    APFP+ V  E    DG V         +S L  D Y +GE+V+ L+   ++ EDV Y ++FH  KPV+PF R    GGE
Sbjct:  177 GVTFLDMHHWSRKNLFSDASIWDIPLIQPRFGCAFDTSLSLKGYDMASVMAKELEAFKFGASCELGFESVEISELGVKADWEFGVKGTNQSMPSLHDFN--VTVLYQTVAAHEP-LFKISIATVIEHFPSAFEVVVVVVDADVALFEGIVNPFRA---TAPFPIRVVGEPELMDGMVQQT------YSKLRADLYANGEYVLHLDSDAVVFEDVTYAHMFHLGKPVLPFRRYGKNGGE 402          
BLAST of mRNA_L-elsbetiae_contig14465.3289.1 vs. uniprot
Match: D8LCC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC7_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 2.570e-37
Identity = 102/305 (33.44%), Postives = 144/305 (47.21%), Query Frame = 3
Query:   63 QVLAALMYSRNPPGMWFINPQQWVIHHMFHPASIWDIPLVKPRFGCALDMSLAVKGYDMANALEAQLNRFI------LGGSCDAGFIDMQHTYLKPKANIEFGFPTGREMPSIIEAKLWVSVVFYA-------------------VGNA-------SPMLLDASISSVLARFPEAAEVVVVFTEEPAIRDVLNVVKAHSKNA-PFPVEVFEEDGPVHLPRGGWPGWSG------------------------------LHVDDYTSGEFVMQLEVGDILVEDVAYDNIFHFRKPVIPFVRLSSEG 788
            ++LAAL YSRNPP +WF+NP QWV HHMF  AS+WD+PLVKPRF CA +++LA +GYD+A     +LNRF        G  C+ G++ +  + L+ K N+E+G       P  +     VS+ + A                   VG            +L+A++ +VL  FP A E V+V     A R+   VV  H+ N  PF ++V    G        W    G                              L  D Y SG+FV+ L++  +L+E + YD++FHF KPVIP  R    G
Sbjct:  712 ELLAALAYSRNPPEIWFLNPTQWVTHHMFKHASVWDVPLVKPRFLCAANLALAKQGYDVAR----ELNRFADFSDGGRGKKCEMGYLALDTSKLQAKPNVEYGSVAKNHRPMPLVEDQRVSLFYDATVAPAAIXXXXXXXXXKNGVGGVRNDTHAEGARMLNATLPTVLKNFPGALEAVIVVPNTDAWREYQLVVGVHNNNGTPFDIKVVNVGGDDA--SSDWVSKDGTGSGLGEEASPRKAIGRRRGSEAEEQPFPLLWTDTYCSGKFVLHLDLNSVLLERITYDHMFHFEKPVIPLNRFQDVG 1010          
BLAST of mRNA_L-elsbetiae_contig14465.3289.1 vs. uniprot
Match: A0A6H5JKY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY0_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 2.030e-36
Identity = 105/304 (34.54%), Postives = 149/304 (49.01%), Query Frame = 3
Query:   33 LQLTQQINAWQVLAALMYSRNPPGMWFINPQQWVIHHMFHPASIWDIPLVKPRFGCALDMSLAVKGYDMANALEAQLNRFI------LGGSCDAGFIDMQHTYLKPKANIEFGFPTGREMPSIIEAKLWVSVVFYA--------------VGNA-------SPMLLDASISSVLARFPEAAEVVVVFTEEPAIRDVLNVVKAHSKN-APFPVEVF---EED---------------GPVHLPRGGWPGWSG----------LHVDDYTSGEFVMQLEVGDILVEDVAYDNIFHFRKPVIPFVRL 776
            L  T+     ++LA L YSRNPP +WF+NP QWV HHMF  AS+WDIPLVKPRF C++++ LA +G D+A     +LNRF        G  C+ G++ +  + L  K ++E+G       P  +     VS+ + A              VG            +L+A++ +VL  FP A E V+V     A R+   VV  H+ +  PF ++V    E+D               G   LPR       G          L  D Y SG+FV+ L++  +L+E + YD+IFHF KPVIPF R 
Sbjct:  738 LMKTEDAFVPELLAVLAYSRNPPEIWFLNPTQWVTHHMFKHASVWDIPLVKPRFLCSVNLLLAKQGDDVAR----ELNRFADFSDGGRGKKCEMGYLPLDTSKLHAKPHVEYGCAATNHRPMPMVEDQRVSLFYDATVAPAAVAAADKNGVGGVRNDTHAEGARMLNATLPTVLMNFPGALEAVIVVPNTDAWREYQLVVGVHNNSDTPFDIKVVNVGEDDASSDWVSKDGTGSGLGEEALPRKAIGQRRGSEAEEQPFPPLWADTYCSGKFVLHLDLNSVLLERITYDHIFHFEKPVIPFNRF 1037          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14465.3289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZV7_9PHAE2.260e-17362.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K6N3_9PHAE6.020e-14158.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FWG7_ECTSI7.290e-5331.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KID1_9PHAE1.040e-4931.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0V3_9PHAE3.650e-4932.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRS3_ECTSI3.280e-4531.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FKL9_ECTSI8.850e-4233.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL81_9PHAE9.290e-3939.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCC7_ECTSI2.570e-3733.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKY0_9PHAE2.030e-3634.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14465contigL-elsbetiae_contig14465:1206..3436 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score82.4
Seed ortholog evalue5.5e-13
Seed eggNOG ortholog2880.D7FI63
Hectar predicted targeting categoryother localisation
EggNOG OGs2D0G2@1,2SE3H@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-14_004010.1
Exons3
Model size1580
Cds size1257
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14465.3289.1prot_L-elsbetiae_contig14465.3289.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14465 1449..3356 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815580.0227983-UTR-L-elsbetiae_contig14465:1205..14481622815580.0227983-UTR-L-elsbetiae_contig14465:1205..1448Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14465 1206..1448 -
1691682971.5043743-UTR-L-elsbetiae_contig14465:1205..14481691682971.5043743-UTR-L-elsbetiae_contig14465:1205..1448Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14465 1206..1448 -
1622815580.0731962-UTR-L-elsbetiae_contig14465:3356..34361622815580.0731962-UTR-L-elsbetiae_contig14465:3356..3436Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14465 3357..3436 -
1691682971.5516372-UTR-L-elsbetiae_contig14465:3356..34361691682971.5516372-UTR-L-elsbetiae_contig14465:3356..3436Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14465 3357..3436 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815580.0337217-CDS-L-elsbetiae_contig14465:1448..16861622815580.0337217-CDS-L-elsbetiae_contig14465:1448..1686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14465 1449..1686 -
1691682971.5170677-CDS-L-elsbetiae_contig14465:1448..16861691682971.5170677-CDS-L-elsbetiae_contig14465:1448..1686Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14465 1449..1686 -
1622815580.0460365-CDS-L-elsbetiae_contig14465:1888..21741622815580.0460365-CDS-L-elsbetiae_contig14465:1888..2174Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14465 1889..2174 -
1691682971.5289426-CDS-L-elsbetiae_contig14465:1888..21741691682971.5289426-CDS-L-elsbetiae_contig14465:1888..2174Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14465 1889..2174 -
1622815580.0604823-CDS-L-elsbetiae_contig14465:2623..33561622815580.0604823-CDS-L-elsbetiae_contig14465:2623..3356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14465 2624..3356 -
1691682971.5427852-CDS-L-elsbetiae_contig14465:2623..33561691682971.5427852-CDS-L-elsbetiae_contig14465:2623..3356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14465 2624..3356 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14465.3289.1

>prot_L-elsbetiae_contig14465.3289.1 ID=prot_L-elsbetiae_contig14465.3289.1|Name=mRNA_L-elsbetiae_contig14465.3289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=419bp
MYSRNPPGMWFINPQQWVIHHMFHPASIWDIPLVKPRFGCALDMSLAVKG
YDMANALEAQLNRFILGGSCDAGFIDMQHTYLKPKANIEFGFPTGREMPS
IIEAKLWVSVVFYAVGNASPMLLDASISSVLARFPEAAEVVVVFTEEPAI
RDVLNVVKAHSKNAPFPVEVFEEDGPVHLPRGGWPGWSGLHVDDYTSGEF
VMQLEVGDILVEDVAYDNIFHFRKPVIPFVRLSSEGGEAFDSPDAAAEAY
QDTYIACGIEAVIETVAVRDFALLRGLVYPRHAYSELRMFASEVHNVDID
GLVEQAHKSCEGIVMADGSPIGPRVGRGVFEASLLGSFIWHFFPDMVHWR
ALDPLDIQPDEWLSDIGKYNIWCSMGYLKGPEDGDSAKERAKALKKTNSR
AACNSFVNSSRTDRGRVQ*
back to top

mRNA from alignment at L-elsbetiae_contig14465:1206..3436-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14465.3289.1 ID=mRNA_L-elsbetiae_contig14465.3289.1|Name=mRNA_L-elsbetiae_contig14465.3289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2231bp|location=Sequence derived from alignment at L-elsbetiae_contig14465:1206..3436- (Laminarionema elsbetiae ELsaHSoW15)
GGTTCACCCTCTCCCACTAACTTCCACCACCTCTGCAATTAACCCAACAA ATAAATGCGTGGCAGGTGTTGGCCGCCCTGATGTACTCCCGTAACCCGCC GGGCATGTGGTTCATCAACCCGCAGCAGTGGGTCATACACCATATGTTCC ACCCGGCGTCTATCTGGGATATCCCGCTGGTGAAGCCAAGGTTCGGGTGC GCCTTGGACATGTCGCTGGCTGTAAAAGGATACGACATGGCGAACGCCCT CGAGGCCCAGCTGAACCGCTTCATATTGGGAGGGTCCTGCGATGCGGGCT TCATCGACATGCAACATACATACCTCAAGCCCAAGGCCAACATCGAGTTC GGCTTTCCAACTGGCAGGGAGATGCCCAGCATCATCGAGGCCAAGCTCTG GGTCAGCGTGGTGTTCTACGCCGTCGGAAACGCCAGCCCGATGCTGCTTG ACGCCTCCATTTCAAGTGTCCTGGCTAGATTCCCAGAGGCAGCCGAAGTC GTGGTGGTCTTCACCGAGGAGCCTGCCATCCGAGATGTCCTGAACGTTGT CAAGGCTCACAGTAAAAACGCACCATTCCCAGTGGAGGTTTTTGAGGAGG ATGGTCCCGTACACTTACCAAGGGGTGGCTGGCCAGGCTGGTCCGGGCTG CACGTCGATGATTATACGTCGGGGGAGTTCGTCATGCAGCTTGAAGTTGG CGACATCTTGGTGGAGGACGTGGCGTATGATAACATCTTCCACTTCCGGA AGCCCGTGATTCCTTTCGTGAGACTTTCCTCGGAGGGGGGTGAAGCGTTC GATTCGCCCGACGGTGAGTGTATTCGCACGTGTACATGATTTTTGGCATG CCGTCGCTGGTGCTGTGCCGGCAGCTGCTGTTGGGATAGTTTGCACAAGA CAAAATCAGGTGTTGCGCGTACTCGTGCCTACCACTGGCCAACCCGTCTC CGCATTACGTTGGTATGGCTACTTTCGCAGGAATTTGGTGCCGAAGCGAT TTAGCTTGTTGCGCCCGAATCCCACTCTGGCTCCGCCCAACCTCACCCAA CACCCGGCAGTGGTTCCTTCGGCGCTTTGCGGTTTGGCTTCTGCCACAGC CCCCAGCTACTGACTCTGAGCACGGCGCGCTCCATGTGCTGCGGATTGCG TTTTTTTACATGCTCTCCCATTCACACAAATCCTGACTTGTGCTGTTGTT CTACCACCACCACGGTTGTGTTATTGTCATGCACCTTTGTACCTCTCTGC CATTTTGGACAGCCGCGGCTGAGGCGTACCAGGATACGTATATCGCCTGC GGGATAGAGGCAGTCATCGAAACGGTTGCGGTGCGGGACTTCGCGCTTCT GAGGGGCCTGGTGTACCCCCGGCATGCTTACTCGGAACTGAGGATGTTTG CCAGCGAAGTGCACAACGTCGATATCGATGGTCTTGTCGAGCAGGCGCAC AAAAGCTGCGAGGGGATTGTCATGGCGGACGGGAGCCCCATCGGACCGAG GGTTGGTCGTGGGGTCTTTGAAGCCAGCCTTTTGGGTTCGTTCATATGGT AAGCTATGGTGGTGGCTGTAGCGGTGGTTTTTGCTGCCGTCGTGGAAGAG TAGAAAATTCTGTGTATAGGTTTATTGTACGAAAGATCGTCCAAATTGCG AATTGTCGGCGATGCTGCCTATGGCCGACGTCGTTGGCAGAACTACCAAC TTGGAACCACCAACTTGAGCTCCCGCCCCGATCTGCCGCCTCGCTCACAG GCATTTTTTTCCCGACATGGTGCACTGGAGAGCACTGGACCCACTAGATA TCCAACCAGACGAGTGGCTTTCCGACATCGGCAAGTACAACATCTGGTGT TCCATGGGCTACCTTAAGGGTCCTGAAGACGGAGATAGCGCCAAAGAGCG AGCAAAAGCACTCAAGAAGACCAACTCTCGAGCGGCGTGTAATAGCTTCG TCAACAGCTCACGTACAGACCGAGGACGTGTGCAGTAGCAGTAGGTGCTG CAGGTGTTCATGTAGGTTGTGCGTAGCTTGACGTGCGCCTCTTCGGAGAA AAGAAAGATACAGTTGTATTCTTCCTGCTTATGGCCGATCGTTTCATTCA AGCATTGGGTCTTTGGCTGAGGCTTTCTGCCCACCGCAGACAGGCGGGTC TTGCTATTTTGGATGTGTCGCCTCGATGGCGGCATGTCCGTGAAATGATC TTCAACCTTGTAAAATACCTTTCCAGTTGCA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig14465:1206..3436-

>mRNA_L-elsbetiae_contig14465.3289.1 ID=mRNA_L-elsbetiae_contig14465.3289.1|Name=mRNA_L-elsbetiae_contig14465.3289.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2514bp|location=Sequence derived from alignment at L-elsbetiae_contig14465:1206..3436- (Laminarionema elsbetiae ELsaHSoW15)
ATGTACTCCCGTAACCCGCCGGGCATGTGGTTCATCAACCCGCAGCAGTG
GGTCATACACCATATGTTCCACCCGGCGTCTATCTGGGATATCCCGCTGG
TGAAGCCAAGGTTCGGGTGCGCCTTGGACATGTCGCTGGCTGTAAAAGGA
TACGACATGGCGAACGCCCTCGAGGCCCAGCTGAACCGCTTCATATTGGG
AGGGTCCTGCGATGCGGGCTTCATCGACATGCAACATACATACCTCAAGC
CCAAGGCCAACATCGAGTTCGGCTTTCCAACTGGCAGGGAGATGCCCAGC
ATCATCGAGGCCAAGCTCTGGGTCAGCGTGGTGTTCTACGCCGTCGGAAA
CGCCAGCCCGATGCTGCTTGACGCCTCCATTTCAAGTGTCCTGGCTAGAT
TCCCAGAGGCAGCCGAAGTCGTGGTGGTCTTCACCGAGGAGCCTGCCATC
CGAGATGTCCTGAACGTTGTCAAGGCTCACAGTAAAAACGCACCATTCCC
AGTGGAGGTTTTTGAGGAGGATGGTCCCGTACACTTACCAAGGGGTGGCT
GGCCAGGCTGGTCCGGGCTGCACGTCGATGATTATACGTCGGGGGAGTTC
GTCATGCAGCTTGAAGTTGGCGACATCTTGGTGGAGGACGTGGCGTATGA
TAACATCTTCCACTTCCGGAAGCCCGTGATTCCTTTCGTGAGACTTTCCT
CGGAGGGGGGTGAAGCGTTCGATTCGCCCGACGATGTACTCCCGTAACCC
GCCGGGCATGTGGTTCATCAACCCGCAGCAGTGGGTCATACACCATATGT
TCCACCCGGCGTCTATCTGGGATATCCCGCTGGTGAAGCCAAGGTTCGGG
TGCGCCTTGGACATGTCGCTGGCTGTAAAAGGATACGACATGGCGAACGC
CCTCGAGGCCCAGCTGAACCGCTTCATATTGGGAGGGTCCTGCGATGCGG
GCTTCATCGACATGCAACATACATACCTCAAGCCCAAGGCCAACATCGAG
TTCGGCTTTCCAACTGGCAGGGAGATGCCCAGCATCATCGAGGCCAAGCT
CTGGGTCAGCGTGGTGTTCTACGCCGTCGGAAACGCCAGCCCGATGCTGC
TTGACGCCTCCATTTCAAGTGTCCTGGCTAGATTCCCAGAGGCAGCCGAA
GTCGTGGTGGTCTTCACCGAGGAGCCTGCCATCCGAGATGTCCTGAACGT
TGTCAAGGCTCACAGTAAAAACGCACCATTCCCAGTGGAGGTTTTTGAGG
AGGATGGTCCCGTACACTTACCAAGGGGTGGCTGGCCAGGCTGGTCCGGG
CTGCACGTCGATGATTATACGTCGGGGGAGTTCGTCATGCAGCTTGAAGT
TGGCGACATCTTGGTGGAGGACGTGGCGTATGATAACATCTTCCACTTCC
GGAAGCCCGTGATTCCTTTCGTGAGACTTTCCTCGGAGGGGGGTGAAGCG
TTCGATTCGCCCGACGCCGCGGCTGAGGCGTACCAGGATACGTATATCGC
CTGCGGGATAGAGGCAGTCATCGAAACGGTTGCGGTGCGGGACTTCGCGC
TTCTGAGGGGCCTGGTGTACCCCCGGCATGCTTACTCGGAACTGAGGATG
TTTGCCAGCGAAGTGCACAACGTCGATATCGATGGTCTTGTCGAGCAGGC
GCACAAAAGCTGCGAGGGGATTGTCATGGCGGACGGGAGCCCCATCGGAC
CGAGGGTTGGTCGTGGGGTCTTTGAAGCCAGCCTTTTGGGTTCGTTCATA
TGCCGCGGCTGAGGCGTACCAGGATACGTATATCGCCTGCGGGATAGAGG
CAGTCATCGAAACGGTTGCGGTGCGGGACTTCGCGCTTCTGAGGGGCCTG
GTGTACCCCCGGCATGCTTACTCGGAACTGAGGATGTTTGCCAGCGAAGT
GCACAACGTCGATATCGATGGTCTTGTCGAGCAGGCGCACAAAAGCTGCG
AGGGGATTGTCATGGCGGACGGGAGCCCCATCGGACCGAGGGTTGGTCGT
GGGGTCTTTGAAGCCAGCCTTTTGGGTTCGTTCATATGGCATTTTTTTCC
CGACATGGTGCACTGGAGAGCACTGGACCCACTAGATATCCAACCAGACG
AGTGGCTTTCCGACATCGGCAAGTACAACATCTGGTGTTCCATGGGCTAC
CTTAAGGGTCCTGAAGACGGAGATAGCGCCAAAGAGCGAGCAAAAGCACT
CAAGAAGACCAACTCTCGAGCGGCGTGTAATAGCTTCGTCAACAGCTCAC
GTACAGACCGAGGACGTGTGCAGTAGGCATTTTTTTCCCGACATGGTGCA
CTGGAGAGCACTGGACCCACTAGATATCCAACCAGACGAGTGGCTTTCCG
ACATCGGCAAGTACAACATCTGGTGTTCCATGGGCTACCTTAAGGGTCCT
GAAGACGGAGATAGCGCCAAAGAGCGAGCAAAAGCACTCAAGAAGACCAA
CTCTCGAGCGGCGTGTAATAGCTTCGTCAACAGCTCACGTACAGACCGAG
GACGTGTGCAGTAG
back to top