mRNA_L-elsbetiae_contig10286.328.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10286.328.1
Unique NamemRNA_L-elsbetiae_contig10286.328.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10286.328.1 vs. uniprot
Match: D8LL03_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL03_ECTSI)

HSP 1 Score: 358 bits (918), Expect = 4.890e-118
Identity = 189/234 (80.77%), Postives = 199/234 (85.04%), Query Frame = 1 
Query:   79 GGTQQDANGARYAS---RRGDDANDTRXXXXXXXTKSGSSGSLSDTYPAVDIGAVLGVDIGGTLSKLVYFEKKAPSKADPKRRRSEDPMGKKLEMKRTVSLGNLHDTMEQQEALQEFYTFMDQASTSGDSGVKDAHLSVYSHALGGVLHFFHFETRFMDHAVEVLGNSPIHRNIQALGCTGGGAFKFEESFLQRLGVRMLQMDEMECLVRGMQFALANIPEACYTYRPPVEVQE 771
            G TQ   NG R+AS   R   D    R           SSGSLSDTYPAVDIGAVLGVDIGGTLSKLVYFEKKAPS+ADP+ + S DPMGKK+EMKRTVSLGNLHDTMEQQEAL+EFYTFMDQAS  G+SGVKDAHLSVYSHALGGVLHFFHFETRFMD AVE + NSPIHRNIQALGCTGGGAFKFEESFLQRL VRMLQMDEMECLVRGMQFALANIPEACYTYRPPVEV++
Sbjct:   40 GETQGQPNGTRHASISRRDSQDGGRVRRGLPPRHAGPDSSGSLSDTYPAVDIGAVLGVDIGGTLSKLVYFEKKAPSEADPQCKPSGDPMGKKVEMKRTVSLGNLHDTMEQQEALKEFYTFMDQASRVGESGVKDAHLSVYSHALGGVLHFFHFETRFMDRAVEAIANSPIHRNIQALGCTGGGAFKFEESFLQRLAVRMLQMDEMECLVRGMQFALANIPEACYTYRPPVEVKK 273
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BLAST of mRNA_L-elsbetiae_contig10286.328.1 vs. uniprot
Match: A0A835Z2M7_9STRA (Fumble-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2M7_9STRA)

HSP 1 Score: 210 bits (535), Expect = 4.000e-61
Identity = 109/179 (60.89%), Postives = 135/179 (75.42%), Query Frame = 1 
Query:  217 VDIGAVLGVDIGGTLSKLVYFEKKAPSKADPKRRRSEDPMGKKLEMKRTVSLGNLHDTMEQQEALQEFYTFMDQASTSGDSGVKDAHLSVYSHALGGVLHFFHFETRFMDHAVEVLGNSPIHRNIQALGCTGGGAFKFEESFLQRLGVRMLQMDEMECLVRGMQFALANIPEACYTYRP 753
            VDIG VLG+DIGGTL+KLVYFEKK P      R  S DP+   + MKR +SLG+L+ T EQ+EAL +FYTFMD     G +GV+D HL+ YSH LGG LHFF FETR MD A+E++ +S IH +I+ALGCTGGGA+KFE+ F +R+G+RMLQMDEM  LVRG+QF +ANIP  CY + P
Sbjct:   77 VDIGGVLGMDIGGTLAKLVYFEKKEPP-GGMVRTCSRDPL---VTMKRNLSLGDLN-TREQKEALMQFYTFMDTQEQFGKAGVRDEHLAYYSHELGGQLHFFRFETRLMDQAIELISSSTIHNSIKALGCTGGGAYKFEDFFQKRMGIRMLQMDEMASLVRGLQFCIANIPGECYAFEP 250
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BLAST of mRNA_L-elsbetiae_contig10286.328.1 vs. uniprot
Match: W7TXJ8_9STRA (Type II pantothenate kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ8_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.400e-41
Identity = 82/184 (44.57%), Postives = 122/184 (66.30%), Query Frame = 1 
Query:  217 VDIGAVLGVDIGGTLSKLVYFEKKAPSKA-----DPKRRRSEDPMGKKLEMKRTVSLGNLHDTMEQQEALQEFYTFMDQASTSGDSGVKDAHLSVYSHALGGVLHFFHFETRFMDHAVEVLGNSPIHRNIQALGCTGGGAFKFEESFLQRLGVRMLQMDEMECLVRGMQFALANIPEACYTYRP 753
            VDIGA+ G+D+GGTLSKLVYFE+   S+        KRR   D   +K  +KR+ SL NL  T    +AL  FY F+    +   + ++D +L+ +S  LGG LHF  FETR+MD  VE++ ++ +H +I ++GCTGGGA+KF + F +RLG+ + +MDE++CL+RG++F L ++   CYTY+P
Sbjct:   64 VDIGAIFGLDVGGTLSKLVYFEQTRKSRKVERMQQQKRRNYTDKPFQKSTLKRSASLENL-STPRHTKALDAFYAFIQAEGSPVRAELRDDNLTFFSRVLGGELHFMRFETRYMDRVVEIVKSNRLHHSINSMGCTGGGAYKFSDLFQERLGIVLRKMDELDCLMRGLEFVLQHVVGECYTYKP 246
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BLAST of mRNA_L-elsbetiae_contig10286.328.1 vs. uniprot
Match: A0A7R9Y8Q7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q7_9STRA)

HSP 1 Score: 134 bits (337), Expect = 5.460e-32
Identity = 84/223 (37.67%), Postives = 118/223 (52.91%), Query Frame = 1 
Query:  217 VDIGAVLGVDIGGTLSKLVYFEKKAPSKADPKRRRS------------------------------------EDPMGKKLEMKRTVSLGNLHDTMEQQEALQEFYTFMDQASTSGDSGVKDAHLSVYSHALGGVLHFFHFETRFMDHAVEVLGNSPIHRNIQALGCTGGGAFKFEESFLQRLGVRMLQMDEMECLVRGMQFALANIPEACYTYRP-PVEVQEA 774
            V IGA+ G+D+GG+LSK+VY+E    +  +PK RRS                                    E P+GK   M+R+ S  NL    +    L+EFY  MD+    G +GV++  L  +S  LGG+LHF  FET+ M+ A++ +    +H NI  + CTGGGA+K+     QRL +   + DEMECLVRG+QF L N+ +  YTY+P P E  EA
Sbjct:  101 VCIGAIFGMDVGGSLSKVVYYEPLPQASPEPKERRSARRGRRKTLDSLDGPAGPVAMERSVTDTGRPEAAAAEPPVGK---MRRSRSFDNLVSP-DHMAVLREFYRIMDETRQLGLTGVREEDLKFHSEELGGILHFIRFETQRMEGAMDFVAAHSLHLNITHIPCTGGGAYKYASVAKQRLEIEFDKHDEMECLVRGLQFVLDNVKDEVYTYKPSPAEQAEA 319
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BLAST of mRNA_L-elsbetiae_contig10286.328.1 vs. uniprot
Match: A0A7S2SKN7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKN7_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.110e-29
Identity = 74/188 (39.36%), Postives = 117/188 (62.23%), Query Frame = 1 
Query:  193 SLSDTYPAVDIGAVLGVDIGGTLSKLVYFEKKAPSKADPKRRRSEDPMGKKLEMKRTVSLGNLHDTMEQQEALQEFYTFM--DQASTSGDSGVKDAHLSVYSHALGGVLHFFHFETRFMDHAVEVLGNSPIHRNIQALGCTGGGAFKFEESFLQRLGVRMLQMDEMECLVRGMQFALANIPEACYTYR 750
            S +D     DIGA+ G+D+GG+L+KLV+FE+ AP      R  S   + K   M+R  SL  L+ T    +AL+ FY FM  ++ +    S V + HL+ YS  LGG++HF HF T  MD  ++++ +  +   +  LGCTGGG+FK+++   ++LGV+++ +DEME LVRG++F ++ +   CYTY+
Sbjct:   69 SSNDWTRGADIGAIFGLDVGGSLAKLVFFERTAPPGIV--RPPSASSLAKPT-MERARSLEVLN-TPACSKALRSFYDFMASEEITKYLGSVVHEDHLAFYSQDLGGMIHFVHFATSDMDRVLQLIRSHKLAHAVLRLGCTGGGSFKYQKEIEEQLGVQVVAVDEMETLVRGIEFVVSTVAGECYTYK 252
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BLAST of mRNA_L-elsbetiae_contig10286.328.1 vs. uniprot
Match: A0A024U6D9_9STRA (Pantothenate kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6D9_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.230e-27
Identity = 64/185 (34.59%), Postives = 97/185 (52.43%), Query Frame = 1 
Query:  193 SLSDTYPAVDIGAVLGVDIGGTLSKLVYFEKKAPSKADPKRRRSEDPMGKKLEMKRTVSLGNLHDTMEQQEALQEFYTFMDQASTSGDSGVKDAHLSVYSHALGGVLHFFHFETRFMDHAVEVLGNSPIHRNIQALGCTGGGAFKFEESFLQRLGVRMLQMDEMECLVRGMQFALANIPEACYTY 747
            S+    P  D+G   G+DIGGTLSK+VYFE+  P+   P+                          M    A  E   F+ +    G +GV+D  LSV S +LGG LHF HFETR M+ A+  +    ++++++ L CTGGGA K+ + F    G+++ + DE++C+V+G+ F L   P   YT+
Sbjct:   40 SVKKISPTSDLGQAFGIDIGGTLSKIVYFEQTQPNARRPR-------------------------AMSHVVAADEMARFVKERDFYGSTGVRDTRLSVTSDSLGGTLHFIHFETRKMEGAIATVSGHGLNQSLRVLSCTGGGAHKYADLFQSLAGIQIKKEDEIKCMVKGLNFLLNLFPYEVYTF 199
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BLAST of mRNA_L-elsbetiae_contig10286.328.1 vs. uniprot
Match: T0QAE4_SAPDV (Pantothenate kinase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0QAE4_SAPDV)

HSP 1 Score: 119 bits (297), Expect = 2.850e-27
Identity = 68/185 (36.76%), Postives = 95/185 (51.35%), Query Frame = 1 
Query:  193 SLSDTYPAVDIGAVLGVDIGGTLSKLVYFEKKAPSKADPKRRRSEDPMGKKLEMKRTVSLGNLHDTMEQQEALQEFYTFMDQASTSGDSGVKDAHLSVYSHALGGVLHFFHFETRFMDHAVEVLGNSPIHRNIQALGCTGGGAFKFEESFLQRLGVRMLQMDEMECLVRGMQFALANIPEACYTY 747
            +L    P  D+G   G+DIGGTLSK+VYFE+     + P+                     N H       A QE   F+  + + G SGV+D  LS+ S  LGG LHF HFETR M+ AV  + N  + ++++ + CTGGGA K+ E      G+ + + DE+ CLVRG+ F L   P   YT+
Sbjct:   34 ALKKISPTSDMGQSFGLDIGGTLSKIVYFEQAPGQNSRPR--------------------ANSHVL-----AAQEVSRFVKSSDSYGSSGVRDTRLSITSETLGGTLHFMHFETRKMEGAVMQVANHSLSQSLRVVSCTGGGAHKYAEMIHMLAGIEVRKKDEIACLVRGLNFLLNVFPNEVYTF 193
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BLAST of mRNA_L-elsbetiae_contig10286.328.1 vs. uniprot
Match: A0A067C1Q8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C1Q8_SAPPC)

HSP 1 Score: 116 bits (290), Expect = 1.860e-26
Identity = 67/185 (36.22%), Postives = 95/185 (51.35%), Query Frame = 1 
Query:  193 SLSDTYPAVDIGAVLGVDIGGTLSKLVYFEKKAPSKADPKRRRSEDPMGKKLEMKRTVSLGNLHDTMEQQEALQEFYTFMDQASTSGDSGVKDAHLSVYSHALGGVLHFFHFETRFMDHAVEVLGNSPIHRNIQALGCTGGGAFKFEESFLQRLGVRMLQMDEMECLVRGMQFALANIPEACYTY 747
            +L    P  D+G   G+DIGGTLSK+VYFE+     + P+                     N H       A QE   F+  + + G SGV+D  LS+ S  LGG LHF HFETR M+ AV  + N  + ++++ + CTGGGA K+ E      G+ + + DE+ CLVRG+ F L   P   +T+
Sbjct:   34 ALKKISPNSDMGQSFGLDIGGTLSKIVYFEQAPGQNSRPR--------------------ANSHVL-----AAQEVSRFVKSSDSYGSSGVRDTRLSITSETLGGTLHFMHFETRKMEGAVMQVANHSLGQSLRVVSCTGGGAHKYAEMIHMLAGIEVRKKDEIACLVRGLNFLLNVFPNEVFTF 193
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BLAST of mRNA_L-elsbetiae_contig10286.328.1 vs. uniprot
Match: A0A1W0AA00_9STRA (Pantothenate kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AA00_9STRA)

HSP 1 Score: 119 bits (297), Expect = 2.200e-26
Identity = 68/185 (36.76%), Postives = 102/185 (55.14%), Query Frame = 1 
Query:  193 SLSDTYPAVDIGAVLGVDIGGTLSKLVYFEKKAPSKADPKRRRSEDPMGKKLEMKRTVSLGNLHDTMEQQEALQEFYTFMDQASTSGDSGVKDAHLSVYSHALGGVLHFFHFETRFMDHAVEVLGNSPIHRNIQALGCTGGGAFKFEESFLQRLGVRMLQMDEMECLVRGMQFALANIPEACYTY 747
            SL    P  D+G   G+DIGGTLSK+V+FE+ + S+  P+                     N H       A Q+   F+  + + G SGV+D  LS+ S  LGG LHF HFETR M+ AV  + N  ++++++ + CTGGGA K+ E   Q  G+++ + DE+ECLV+G+ F L   P+  +T+
Sbjct:  908 SLKKISPTSDMGRSFGLDIGGTLSKIVFFEQSSSSQR-PR--------------------ANSHVL-----AAQQVSAFVKASDSYGSSGVRDTRLSITSETLGGTLHFIHFETRKMEGAVLHVANHSLNQSLRVVSCTGGGAHKYAEMIEQLAGIQVQKKDEIECLVKGLNFLLNVFPQEVFTF 1066
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BLAST of mRNA_L-elsbetiae_contig10286.328.1 vs. uniprot
Match: A0A7S2G7W6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7W6_9STRA)

HSP 1 Score: 111 bits (278), Expect = 3.170e-26
Identity = 59/138 (42.75%), Postives = 92/138 (66.67%), Query Frame = 1 
Query:  352 MKRTVSLGNLHDTMEQQEALQEFYTFMDQASTSGD----SGVKDAHLSVYSHALGGVLHFFHFETRFMDHAVEVLGNSPIHRNIQALGCTGGGAFKFEESFLQRLGVRMLQMDEMECLVRGMQFALANIPEACYTYRP 753
            +KR  SL  L DT    + L+ FY FM  AS +G+    S V +  L+ Y+ +LGG LHF HF+T+ MD  + ++    +H  I  LGCTGGG+FK++++F ++LG++++ +DEME LVRG++F ++N+   CYTY+P
Sbjct:   41 IKRVKSLQFL-DTPVCTKTLRAFYDFM--ASQAGNMYISSAVHEKDLAFYAPSLGGKLHFLHFQTKDMDRVLRLIRQHQLHHTITRLGCTGGGSFKYKDTFEKQLGIQVVAIDEMEGLVRGLEFVVSNVVGECYTYKP 175
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10286.328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL03_ECTSI4.890e-11880.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z2M7_9STRA4.000e-6160.89Fumble-domain-containing protein n=1 Tax=Tribonema... [more]
W7TXJ8_9STRA3.400e-4144.57Type II pantothenate kinase n=2 Tax=Monodopsidacea... [more]
A0A7R9Y8Q7_9STRA5.460e-3237.67Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2SKN7_9STRA1.110e-2939.36Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A024U6D9_9STRA2.230e-2734.59Pantothenate kinase n=1 Tax=Aphanomyces invadans T... [more]
T0QAE4_SAPDV2.850e-2736.76Pantothenate kinase n=2 Tax=Saprolegniaceae TaxID=... [more]
A0A067C1Q8_SAPPC1.860e-2636.22Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A1W0AA00_9STRA2.200e-2636.76Pantothenate kinase n=1 Tax=Thraustotheca clavata ... [more]
A0A7S2G7W6_9STRA3.170e-2642.75Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10286contigL-elsbetiae_contig10286:2166..5586 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score362.1
Seed ortholog evalue2.4e-97
Seed eggNOG ortholog2880.D8LL03
Preferred namePANK1
KEGG rclassRC00002,RC00017
KEGG koko:K09680,ko:K12648,ko:K19942
KEGG ReactionR02971,R03018,R04391
KEGG Pathwayko00770,ko01100,ko04621,ko04622,ko04623,ko05160,ko05161,ko05162,ko05164,ko05168,map00770,map01100,map04621,map04622,map04623,map05160,map05161,map05162,map05164,map05168
KEGG ModuleM00120
Hectar predicted targeting categorymitochondrion
GOsGO:0000003,GO:0000278,GO:0002009,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004594,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005768,GO:0005819,GO:0005829,GO:0005856,GO:0005886,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007049,GO:0007059,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0007610,GO:0007622,GO:0007623,GO:0007626,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009314,GO:0009628,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010212,GO:0010332,GO:0010564,GO:0010565,GO:0012505,GO:0015630,GO:0015936,GO:0015937,GO:0015939,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019216,GO:0019217,GO:0019218,GO:0019222,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0030117,GO:0030118,GO:0030154,GO:0031323,GO:0031410,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031982,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040011,GO:0042592,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045475,GO:0046390,GO:0046483,GO:0048232,GO:0048468,GO:0048475,GO:0048477,GO:0048511,GO:0048512,GO:0048513,GO:0048563,GO:0048569,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051188,GO:0051302,GO:0051321,GO:0051704,GO:0051716,GO:0051726,GO:0055037,GO:0055086,GO:0055088,GO:0055090,GO:0060429,GO:0060562,GO:0061024,GO:0062012,GO:0065007,GO:0065008,GO:0070013,GO:0070328,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0080090,GO:0090207,GO:0090407,GO:0097708,GO:0098796,GO:0104004,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1904251
EggNOG free text desc.pantothenate kinase activity
EggNOG OGsCOG5146@1,KOG2201@2759
EC2.7.1.33
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Ec32 ortholog descriptionType II pantothenate kinase
Ec32 orthologEc-11_006230.1
Exons3
Model size849
Cds size849
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10286.328.1prot_L-elsbetiae_contig10286.328.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10286 2166..5586 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815257.5573204-CDS-L-elsbetiae_contig10286:2165..24201622815257.5573204-CDS-L-elsbetiae_contig10286:2165..2420Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10286 2166..2420 -
1691682800.4111147-CDS-L-elsbetiae_contig10286:2165..24201691682800.4111147-CDS-L-elsbetiae_contig10286:2165..2420Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10286 2166..2420 -
1622815257.571701-CDS-L-elsbetiae_contig10286:3928..41771622815257.571701-CDS-L-elsbetiae_contig10286:3928..4177Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10286 3929..4177 -
1691682800.4254127-CDS-L-elsbetiae_contig10286:3928..41771691682800.4254127-CDS-L-elsbetiae_contig10286:3928..4177Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10286 3929..4177 -
1622815257.5824292-CDS-L-elsbetiae_contig10286:5241..55861622815257.5824292-CDS-L-elsbetiae_contig10286:5241..5586Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10286 5242..5586 -
1691682800.4344537-CDS-L-elsbetiae_contig10286:5241..55861691682800.4344537-CDS-L-elsbetiae_contig10286:5241..5586Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10286 5242..5586 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10286.328.1

>prot_L-elsbetiae_contig10286.328.1 ID=prot_L-elsbetiae_contig10286.328.1|Name=mRNA_L-elsbetiae_contig10286.328.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=283bp
ASAAVFLLHRRQRRLRRGATERLGGRGGTQQDANGARYASRRGDDANDTR
PPPRHHHTKSGSSGSLSDTYPAVDIGAVLGVDIGGTLSKLVYFEKKAPSK
ADPKRRRSEDPMGKKLEMKRTVSLGNLHDTMEQQEALQEFYTFMDQASTS
GDSGVKDAHLSVYSHALGGVLHFFHFETRFMDHAVEVLGNSPIHRNIQAL
GCTGGGAFKFEESFLQRLGVRMLQMDEMECLVRGMQFALANIPEACYTYR
PPVEVQEAVPPPPPPPPPPPPAERAPAERAEGE
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mRNA from alignment at L-elsbetiae_contig10286:2166..5586-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10286.328.1 ID=mRNA_L-elsbetiae_contig10286.328.1|Name=mRNA_L-elsbetiae_contig10286.328.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3421bp|location=Sequence derived from alignment at L-elsbetiae_contig10286:2166..5586- (Laminarionema elsbetiae ELsaHSoW15)
GCCTCTGCCGCGGTGTTCCTGCTGCACCGTCGACAACGACGGCTGCGCCG
AGGGGCCACGGAGCGCCTCGGGGGGAGAGGCGGAACGCAGCAGGACGCCA
ACGGCGCGAGATACGCGTCGCGCCGCGGCGATGACGCGAACGACACGAGA
CCCCCTCCTCGACACCACCACACCAAGTCGGGGAGCTCGGGGAGCTTGTC
GGATACCTATCCAGCCGTGGACATCGGGGCGGTACTCGGCGTGGATATCG
GGGGGACGCTCTCTAAGCTGGTGTACTTTGAGAAGAAAGCGCCCTCGAAG
GCCGACCCCAAGCGAAGACGCTCGGAGGATCCTATGGGAAAGAAGGTGCG
TACTTCATCTACACAACACCAGCACGACACAAGATAGCACACCCCCCCTG
GACCGATTTTGAAACCTCCAAGTACTCCACAGCGAGAAGAGCGCCAGTCC
CGAAAAGGGCGGTGTTGGAAATATCTCATCAAAAGCTGCCCGAAAACGTG
TCGTTTGGTATAATCATAATCATACCCATTGTGGTCGCGGAGTGTAAGCG
AGCTCTGAAATTCAGGCCAGGGGGTGTGTTATCTTGCGTCATAGGTACAC
GGTACCGCAGGTACTCCAACTCTCTCTTCAGACCTGCCAAGTCCGGCATG
ACATTCCAATTGTAGACACTTGCAATGGTGTTCCTGACATGTGCCAGCCC
AAGATTTTCTCAGCGATTAACTATTTACTACTGCCGTCTACAAGCCCCAG
GGTGGATTTCATGAAAATCAACAACAGCAACACACCTGCCGAGGGACAGC
AGTGTCGTGTATCATCAGACTTGGTCAGGAACCTGTGCAGTAATGCTTCG
TCCGTCTCGTTCTTGGCACTGCTGTTGTGCGCACATGCTTTGCAGACAAG
CGGTATGTTGCACCTAATTATAGTCTTATCATTGCCATTCAGATCAGCAG
ATTGGACGGTAGAATACAGGGGACGAAAATTAAGATTTCGTACGATACAA
AACATGAATTATTTATGAAAGTACAAACAGGGTTGGACCGCTTTTTTTAG
ATGTCAGGGCTAATTTTTAAGCAAAGTATTCTCCCATTATTCTCGTCACT
CGCGTGTCGGCAGTCCTTGTTGTACATACGTTTGAAGTCATTTGTAGTTC
ACCCACGCCATCTACGTACCTATGGATCTAAATACGTCGATGCTCCTCTT
TCTGTGTACCTCTGGAACAAAACGTCTAGGTACTCGGCCGGACCAGCACC
ACCACATCACGCACGGCTGCTGTTTTATTCGTTCATTATTTCACCACGGA
TGAGTCCCGTCTCTTAATGGCGGGGAAGTTCTTTCTTGGGTGTCCTGATT
TATTTTCAAGACGCCGCTCTGCTGTTCTGTTCTGTTCTGTTCTATTGTGT
GCGTTTCAGCTGGAGATGAAGCGGACGGTCAGCCTGGGCAACCTGCACGA
CACGATGGAGCAGCAGGAGGCGCTCCAGGAGTTCTACACGTTCATGGACC
AGGCGTCAACGAGCGGGGACAGCGGCGTCAAGGACGCCCACCTCAGCGTC
TACAGCCACGCCCTCGGGGGAGTCCTCCACTTCTTCCACTTCGAGACCCG
CTTCATGGACCACGCGGTCGAGGTCCTCGGCAACAGCCCAATCCACCGCA
ACATCCAGGTACGTACGTAGGTGGGTAGGTCACGAGGAGTCCGTGCCTCT
GTCCACCTCCCTTCCCGCCCGCACCCTTGCTGATTTTTTTTTTCCCCTGC
TGCCGAGTGAGTCAATAAGAAAGCAAGGACAAGACACTTTTTTTTTTTTT
TTTCCTGGAAATCCTGCTTTTTCTCCCCGCGCGGGTTACGACATGGTGCA
CACACGTGTGCACCGCCGTCCGTACATATTACCGTTCACGTATAGATACG
TACGTATGTACGTATGCATGGTGGTCCGACTGATGTTTGTTGTTGTTTGT
GTGTTTGGCTACTTTTCTGTGCAGCAGTACGCACTTACGTAGCCCCCTCC
CCCCCCCAACCCAACCCAACAAAACCGTCCAGGACGTGCTTTCCCATATG
TATGTTATTGATATGTACATACATATGTATGTCGTTCATAATCGTGCGTG
AGTTCGCACCTCGCCTGGGACCGACTTTCAAAGGTCTATTCGATTACTCC
ACAAGAAGAGTTATCAGTGCCGAAAAAAGGGAGGCGTTGGACAGATCTCG
TCGATAGCTGTCCAAAAACGTGTCGTTTGATATATACGTACATGCACAAG
TTATTAGAGAAAATCTTACTCGTTGCGGAGTGACCGAGCTTTGAAAAATC
GGTCCTGGGGGGTGGGGGGGTTGCGTGGGTGCGAACTCACGCATGATTAC
GGCATATATGTCTTCCCCGATGAGACGTGGACGCTGTTGTCTGCTAAGGG
CGGGTCTTAACGTTAGAAATGTCAGCAAGTTTGGCAAGCGAATTGAAATC
GAATTTGTTTGTGATTGGTCAAGCCCAAAAAATCATCCACGGGGCTTGGT
GGGTGCTATATAGCATTTCCATCCCACGGAGCTAGCTTTTGGCGCACCAA
AAATCAACCCTCCAGAGGGTTGATTTTTCGCAGTCGCTCGAACGAATTGG
ATTGACCCACGAAACGTACATGTCGCCCCCCGTGCTGGCGCGTTTTCCCT
TTGCCACGCTGCCACACCGATCGCCCGGTACCAGCGGTTTGGGGATAGCT
GTATTGTGACAGGCCTGTGCGCGTGTAGAAAAAAAACAGGCTCTCTGTTT
TGTGCACGGCTGCTGTTTTCGAAAAAATGATGCCAACGCGGTGGCGTCGT
TGCGTCTCGGCAACCCAAACATCAGTTCTAGCTGACGTTTGAGGATGAGG
TTTGGACCATGAGGACCTTTTGTTCAGACTTTAACCTTGTGACTTGTTGT
GATATTTTTATAGCTACCCTGTGGCACACGAGCTGCCTGTGAACTTTCAG
TCAACCTGCCCATCGGCGGCCCCCCGGGGATATCCGCGGTAACCGATTTC
GCTCCTTGCGCGGGGGCGCTGATTGTCCAGATTCGAGCCCCAAATTCGAT
TCCAATTCGCTTTCCAAATTGGCTGACATTTCTAACGTTAAGACACGCCC
TAGAAACTACCGTGACGCTCTCGCCTGGCCCATCTACGTGTGCATCTCCC
CCCCCCCTTTTGGCAGGCGCTTGGCTGCACCGGGGGTGGCGCGTTCAAGT
TCGAGGAGTCGTTCCTGCAGCGGCTAGGGGTGCGGATGCTACAGATGGAC
GAGATGGAGTGTCTCGTTCGGGGGATGCAGTTCGCCCTGGCGAATATTCC
GGAGGCGTGCTACACGTACCGGCCACCCGTAGAGGTGCAGGAAGCGGTGC
CGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCCGCAGAGCGGGCGCCC
GCGGAGCGGGCGGAAGGGGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10286:2166..5586-

>mRNA_L-elsbetiae_contig10286.328.1 ID=mRNA_L-elsbetiae_contig10286.328.1|Name=mRNA_L-elsbetiae_contig10286.328.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1698bp|location=Sequence derived from alignment at L-elsbetiae_contig10286:2166..5586- (Laminarionema elsbetiae ELsaHSoW15)
GCCTCTGCCGCGGTGTTCCTGCTGCACCGTCGACAACGACGGCTGCGCCG
AGGGGCCACGGAGCGCCTCGGGGGGAGAGGCGGAACGCAGCAGGACGCCA
ACGGCGCGAGATACGCGTCGCGCCGCGGCGATGACGCGAACGACACGAGA
CCCCCTCCTCGACACCACCACACCAAGTCGGGGAGCTCGGGGAGCTTGTC
GGATACCTATCCAGCCGTGGACATCGGGGCGGTACTCGGCGTGGATATCG
GGGGGACGCTCTCTAAGCTGGTGTACTTTGAGAAGAAAGCGCCCTCGAAG
GCCGACCCCAAGCGAAGACGCTCGGAGGATCCTATGGGAAAGAAGGCCTC
TGCCGCGGTGTTCCTGCTGCACCGTCGACAACGACGGCTGCGCCGAGGGG
CCACGGAGCGCCTCGGGGGGAGAGGCGGAACGCAGCAGGACGCCAACGGC
GCGAGATACGCGTCGCGCCGCGGCGATGACGCGAACGACACGAGACCCCC
TCCTCGACACCACCACACCAAGTCGGGGAGCTCGGGGAGCTTGTCGGATA
CCTATCCAGCCGTGGACATCGGGGCGGTACTCGGCGTGGATATCGGGGGG
ACGCTCTCTAAGCTGGTGTACTTTGAGAAGAAAGCGCCCTCGAAGGCCGA
CCCCAAGCGAAGACGCTCGGAGGATCCTATGGGAAAGAAGCTGGAGATGA
AGCGGACGGTCAGCCTGGGCAACCTGCACGACACGATGGAGCAGCAGGAG
GCGCTCCAGGAGTTCTACACGTTCATGGACCAGGCGTCAACGAGCGGGGA
CAGCGGCGTCAAGGACGCCCACCTCAGCGTCTACAGCCACGCCCTCGGGG
GAGTCCTCCACTTCTTCCACTTCGAGACCCGCTTCATGGACCACGCGGTC
GAGGTCCTCGGCAACAGCCCAATCCACCGCAACATCCAGCTGGAGATGAA
GCGGACGGTCAGCCTGGGCAACCTGCACGACACGATGGAGCAGCAGGAGG
CGCTCCAGGAGTTCTACACGTTCATGGACCAGGCGTCAACGAGCGGGGAC
AGCGGCGTCAAGGACGCCCACCTCAGCGTCTACAGCCACGCCCTCGGGGG
AGTCCTCCACTTCTTCCACTTCGAGACCCGCTTCATGGACCACGCGGTCG
AGGTCCTCGGCAACAGCCCAATCCACCGCAACATCCAGGCGCTTGGCTGC
ACCGGGGGTGGCGCGTTCAAGTTCGAGGAGTCGTTCCTGCAGCGGCTAGG
GGTGCGGATGCTACAGATGGACGAGATGGAGTGTCTCGTTCGGGGGATGC
AGTTCGCCCTGGCGAATATTCCGGAGGCGTGCTACACGTACCGGCCACCC
GTAGAGGTGCAGGAAGCGGTGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC
GCCGCCCGCAGAGCGGGCGCCCGCGGAGCGGGCGGAAGGGGAGGCGCTTG
GCTGCACCGGGGGTGGCGCGTTCAAGTTCGAGGAGTCGTTCCTGCAGCGG
CTAGGGGTGCGGATGCTACAGATGGACGAGATGGAGTGTCTCGTTCGGGG
GATGCAGTTCGCCCTGGCGAATATTCCGGAGGCGTGCTACACGTACCGGC
CACCCGTAGAGGTGCAGGAAGCGGTGCCGCCGCCGCCGCCGCCGCCGCCG
CCGCCGCCGCCCGCAGAGCGGGCGCCCGCGGAGCGGGCGGAAGGGGAG
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