mRNA_L-elsbetiae_contig14447.3279.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14447.3279.1 vs. uniprot
Match: D7FYG8_ECTSI (SGF29 C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYG8_ECTSI) HSP 1 Score: 153 bits (386), Expect = 3.350e-41 Identity = 74/80 (92.50%), Postives = 77/80 (96.25%), Query Frame = 1 Query: 1 VVPLEGRSERLQKGDDVLAVYVDTTSFYHATIAIPPRGRGAQIGNGGTAHVQFVDDADEHGVTPQRAVPIIHIIKLPMGS 240 V+PLEGR+ERL KGDDVLAVYVDTTSFYHATIAIPPRGRG QIGNGGTAHVQFVDDADEHGVTP RAVPIIHIIKLP+GS Sbjct: 192 VIPLEGRTERLSKGDDVLAVYVDTTSFYHATIAIPPRGRG-QIGNGGTAHVQFVDDADEHGVTPHRAVPIIHIIKLPLGS 270
BLAST of mRNA_L-elsbetiae_contig14447.3279.1 vs. uniprot
Match: A0A835ZFQ3_9STRA (SGF29 tudor-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ3_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 5.730e-13 Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 1 Query: 16 GRSERLQKGDDVLAVYVDTTSFYHATIAIPPRGRGAQIGNGGTAHVQFVDDADEHGVTPQRAVPIIHIIKLP 231 G +L KG+ V+AVY DTTSFY A I++PPR RG+QI + TA VQF DDAD+ G+TP R + HI+ LP Sbjct: 220 GSGTKLSKGESVMAVYPDTTSFYKAVISVPPR-RGSQI-HSTTASVQFEDDADDSGMTPHRVILTKHIMPLP 289
BLAST of mRNA_L-elsbetiae_contig14447.3279.1 vs. uniprot
Match: A0A7S2EZA3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EZA3_TRICV) HSP 1 Score: 69.7 bits (169), Expect = 2.220e-11 Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 16 GRSERLQKGDDVLAVYVDTTSFYHATIAIPPRGRGAQIGNGGTAHVQFVDDADEHGVTPQRAVPIIHIIKLP 231 G +RL +GD + AVY DTTSFY AT+A PPR G V F DDADEHG+T +AV + H++++P Sbjct: 38 GGVDRLSRGDVIYAVYPDTTSFYQATVAQPPR---KVSGGESFVMVNFKDDADEHGITHDKAVLMKHVMRVP 106
BLAST of mRNA_L-elsbetiae_contig14447.3279.1 vs. uniprot
Match: A0A7S2WVH2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVH2_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 3.310e-10 Identity = 36/77 (46.75%), Postives = 44/77 (57.14%), Query Frame = 1 Query: 1 VVPLEGRSERLQKGDDVLAVYVDTTSFYHATIAIPPRGRGAQIGNGGTAHVQFVDDADEHGVTPQRAVPIIHIIKLP 231 V+ L+ E LQKGD VLAV+ DTTSFY I+ P + R A G VQF DD DE G P R +P H++ P Sbjct: 183 VIRLDEAVENLQKGDTVLAVFPDTTSFYRGRISKPVKNRSASSGGDSEVFVQFDDDEDETGRLPHRCIPARHVMPDP 259
BLAST of mRNA_L-elsbetiae_contig14447.3279.1 vs. uniprot
Match: A0A7S2W6R2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6R2_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 6.000e-9 Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 1 Query: 28 RLQKGDDVLAVYVDTTSFYHATI-AIPPRGRGAQIGNGGTAHVQFVDDADEHGVTPQRAVPIIHIIKLP 231 +L KG++VLAVY DTTSFY A + ++ + GA G+ VQF DD D+ G+ P R+V I+HII+ P Sbjct: 188 KLSKGEEVLAVYPDTTSFYPAIVTSVSRKMGGALAGDSSFCTVQFHDDEDDSGINPDRSVKILHIIRPP 256
BLAST of mRNA_L-elsbetiae_contig14447.3279.1 vs. uniprot
Match: A0A7S2G351_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G351_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 5.330e-8 Identity = 37/78 (47.44%), Postives = 47/78 (60.26%), Query Frame = 1 Query: 1 VVPLEGRSERLQKGDDVLAVYVDTTSFYHATIAIPPRGRGAQIGNGGT-AHVQFVDDADEHGVTPQRAVPIIHIIKLP 231 VV LEG RL +G++V A+Y DTTSFY A + PR R A NG VQF DDADE G P R + + ++I+ P Sbjct: 111 VVMLEGA--RLTRGEEVYAIYPDTTSFYPAVVTSAPR-RSASAANGPVFCTVQFHDDADETGNNPDRQIALQYVIRPP 185
BLAST of mRNA_L-elsbetiae_contig14447.3279.1 vs. uniprot
Match: A0A7S2XXI6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXI6_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 9.410e-8 Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 1 Query: 1 VVPLEGRSERLQKGDDVLAVYVDTTSFYHATIAIPPRGRGAQIGNGGTAH--VQFVDDADEHGVTPQRAVPIIHIIKLPMGS 240 V+ LE L+KGD+VLA++ +TTSFY A I+ PP+ + GN T V+FVDD D+ G TP R V ++++ +P + Sbjct: 88 VLKLEPGLGDLEKGDEVLAIFPETTSFYRAKISKPPK----KSGNPATQECIVKFVDDEDDTGRTPNRRVLSMYVVPIPQDN 165
BLAST of mRNA_L-elsbetiae_contig14447.3279.1 vs. uniprot
Match: A0A7R9Y978_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y978_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.570e-7 Identity = 36/76 (47.37%), Postives = 47/76 (61.84%), Query Frame = 1 Query: 1 VVPLEGRSERLQKGDDVLAVYVDTTSFYHATIAIPPRGRGAQIGNGGTAHVQFVDDADEHGVTPQRAVPIIHIIKL 228 VV L + L++GD+VLAV+ DTTSFY I+ R RGA+ A VQFVDD D HG TP R +P +I++ Sbjct: 153 VVGLSEGLDGLERGDEVLAVFPDTTSFYRGFISKALR-RGAE-----EASVQFVDDEDGHGNTPHRRIPARFVIRM 222
BLAST of mRNA_L-elsbetiae_contig14447.3279.1 vs. uniprot
Match: A0A6H5L6S1_9PHAE (SGF29 C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6S1_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 2.310e-7 Identity = 35/80 (43.75%), Postives = 50/80 (62.50%), Query Frame = 1 Query: 1 VVPLEGRSERLQKGDDVLAVYVDTTSFYHATI-AIPPRGRGAQIGNGGTAHVQFVDDADEHGVTPQRAVPIIHIIKLPMG 237 V+ LE ++ +QKG+ VLAV+ DTTSFY TI +P GA+ V+F DDAD+ G TP R++P +++ LP G Sbjct: 152 VIRLEDSTKGVQKGERVLAVFPDTTSFYLGTIHRVPKPAPGAER----RIEVKFNDDADDTGRTPGRSLPARYVVPLPEG 227
BLAST of mRNA_L-elsbetiae_contig14447.3279.1 vs. uniprot
Match: D7FGV9_ECTSI (SGF29 C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV9_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 6.270e-7 Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 1 VVPLEGRSERLQKGDDVLAVYVDTTSFYHATI-AIPPRGRGAQIGNGGTAHVQFVDDADEHGVTPQRAVPIIHIIKLPMG 237 V+ LE ++ +QKG+ VLAV+ DTTSFY TI +P GA+ V+F DDAD+ G TP R +P +++ LP G Sbjct: 424 VIRLEDSTKGVQKGERVLAVFPDTTSFYLGTIHRVPKPAPGAER----RIEVKFNDDADDTGRTPGRPLPARYVVPLPEG 499 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14447.3279.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14447.3279.1 >prot_L-elsbetiae_contig14447.3279.1 ID=prot_L-elsbetiae_contig14447.3279.1|Name=mRNA_L-elsbetiae_contig14447.3279.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=81bp VVPLEGRSERLQKGDDVLAVYVDTTSFYHATIAIPPRGRGAQIGNGGTAHback to top mRNA from alignment at L-elsbetiae_contig14447:2956..4169- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14447.3279.1 ID=mRNA_L-elsbetiae_contig14447.3279.1|Name=mRNA_L-elsbetiae_contig14447.3279.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1214bp|location=Sequence derived from alignment at L-elsbetiae_contig14447:2956..4169- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14447:2956..4169- >mRNA_L-elsbetiae_contig14447.3279.1 ID=mRNA_L-elsbetiae_contig14447.3279.1|Name=mRNA_L-elsbetiae_contig14447.3279.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=486bp|location=Sequence derived from alignment at L-elsbetiae_contig14447:2956..4169- (Laminarionema elsbetiae ELsaHSoW15)back to top |