prot_L-elsbetiae_contig1444.3277.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1444.3277.1
Unique Nameprot_L-elsbetiae_contig1444.3277.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length310
Homology
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BLAST of mRNA_L-elsbetiae_contig1444.3277.1 vs. uniprot
Match: D7G778_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G778_ECTSI)

HSP 1 Score: 457 bits (1175), Expect = 4.530e-160
Identity = 237/304 (77.96%), Postives = 264/304 (86.84%), Query Frame = 0 
Query:    7 LLVLLPV-ACAGAGGSVSVNIKDLGAIDGIQALDIRGSYDGPVTDKINGKGSYVFNKDRFVPAGLSASSSTDTPYGKAYGTITVDPQEKTAVVEGAIRNEELGTFSTSLKASNEAGGVLGPLKWMSNPMSFPFAMQEATPMKIAIAHDVSTKEGHVSIAAKLNSNFDGKLMLPSQGNPVATLVGSHSPDKASDIRASANVLDLVGSGFGKGAIGVTYRRDLDAVPVRFLPLLRILNRKPAFPPFQGSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLAGRGRVAQRGGSSGVASTVSLRQSFRLF 309
            +LVL  V A A AGG+VS+NIKDLGAI+GIQ+LDIRG+YDG ++  ++GK SYVFNKDR +PAGLSASSSTDT YGKA+GT+TVDPQ+KTAVVEG+IRNEELG FST+LKAS + GGVLGPLKW SNP+SFPFA+QEATPM IAIAHD++TKEGH+SIAAKLNSNFDGKLMLPSQG+PVATLVGSHSPDKASDIRASANVLDLVGSGFGKGAIGVTYRRDLDAV                     GSSSRVTLEGKDTGDFAWSLSNTSKRMTLVL+GRGRVA+RG  +GV STVSLRQSFR+F
Sbjct:   14 VLVLFHVLARASAGGTVSINIKDLGAIEGIQSLDIRGNYDGQLSKGVSGKASYVFNKDRVLPAGLSASSSTDTAYGKAFGTVTVDPQDKTAVVEGSIRNEELGMFSTTLKASEKEGGVLGPLKWTSNPVSFPFALQEATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHSPDKASDIRASANVLDLVGSGFGKGAIGVTYRRDLDAVA--------------------GSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLSGRGRVARRGEGTGVGSTVSLRQSFRMF 297
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1444.3277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G778_ECTSI4.530e-16077.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..309
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.671

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1444contigL-elsbetiae_contig1444:17417..22460 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1444.3277.1mRNA_L-elsbetiae_contig1444.3277.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1444 17417..22460 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1444.3277.1 ID=prot_L-elsbetiae_contig1444.3277.1|Name=mRNA_L-elsbetiae_contig1444.3277.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=310bp
MISPGALLVLLPVACAGAGGSVSVNIKDLGAIDGIQALDIRGSYDGPVTD
KINGKGSYVFNKDRFVPAGLSASSSTDTPYGKAYGTITVDPQEKTAVVEG
AIRNEELGTFSTSLKASNEAGGVLGPLKWMSNPMSFPFAMQEATPMKIAI
AHDVSTKEGHVSIAAKLNSNFDGKLMLPSQGNPVATLVGSHSPDKASDIR
ASANVLDLVGSGFGKGAIGVTYRRDLDAVPVRFLPLLRILNRKPAFPPFQ
GSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLAGRGRVAQRGGSSGVASTV
SLRQSFRLF*
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