mRNA_L-elsbetiae_contig1444.3277.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1444.3277.1 vs. uniprot
Match: D7G778_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G778_ECTSI) HSP 1 Score: 457 bits (1175), Expect = 4.530e-160 Identity = 237/304 (77.96%), Postives = 264/304 (86.84%), Query Frame = 1 Query: 19 LLVLLPV-ACAGAGGSVSVNIKDLGAIDGIQALDIRGSYDGPVTDKINGKGSYVFNKDRFVPAGLSASSSTDTPYGKAYGTITVDPQEKTAVVEGAIRNEELGTFSTSLKASNEAGGVLGPLKWMSNPMSFPFAMQEATPMKIAIAHDVSTKEGHVSIAAKLNSNFDGKLMLPSQGNPVATLVGSHSPDKASDIRASANVLDLVGSGFGKGAIGVTYRRDLDAVPVRFLPLLRILNRKPAFPPFQGSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLAGRGRVAQRGGSSGVASTVSLRQSFRLF 927 +LVL V A A AGG+VS+NIKDLGAI+GIQ+LDIRG+YDG ++ ++GK SYVFNKDR +PAGLSASSSTDT YGKA+GT+TVDPQ+KTAVVEG+IRNEELG FST+LKAS + GGVLGPLKW SNP+SFPFA+QEATPM IAIAHD++TKEGH+SIAAKLNSNFDGKLMLPSQG+PVATLVGSHSPDKASDIRASANVLDLVGSGFGKGAIGVTYRRDLDAV GSSSRVTLEGKDTGDFAWSLSNTSKRMTLVL+GRGRVA+RG +GV STVSLRQSFR+F Sbjct: 14 VLVLFHVLARASAGGTVSINIKDLGAIEGIQSLDIRGNYDGQLSKGVSGKASYVFNKDRVLPAGLSASSSTDTAYGKAFGTVTVDPQDKTAVVEGSIRNEELGMFSTTLKASEKEGGVLGPLKWTSNPVSFPFALQEATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHSPDKASDIRASANVLDLVGSGFGKGAIGVTYRRDLDAVA--------------------GSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLSGRGRVARRGEGTGVGSTVSLRQSFRMF 297 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1444.3277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1444.3277.1 >prot_L-elsbetiae_contig1444.3277.1 ID=prot_L-elsbetiae_contig1444.3277.1|Name=mRNA_L-elsbetiae_contig1444.3277.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=310bp MISPGALLVLLPVACAGAGGSVSVNIKDLGAIDGIQALDIRGSYDGPVTDback to top mRNA from alignment at L-elsbetiae_contig1444:17417..22460- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1444.3277.1 ID=mRNA_L-elsbetiae_contig1444.3277.1|Name=mRNA_L-elsbetiae_contig1444.3277.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5044bp|location=Sequence derived from alignment at L-elsbetiae_contig1444:17417..22460- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1444:17417..22460- >mRNA_L-elsbetiae_contig1444.3277.1 ID=mRNA_L-elsbetiae_contig1444.3277.1|Name=mRNA_L-elsbetiae_contig1444.3277.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1860bp|location=Sequence derived from alignment at L-elsbetiae_contig1444:17417..22460- (Laminarionema elsbetiae ELsaHSoW15)back to top |