mRNA_L-elsbetiae_contig14411.3262.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: D7FKS6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKS6_ECTSI) HSP 1 Score: 492 bits (1267), Expect = 5.460e-164 Identity = 252/334 (75.45%), Postives = 286/334 (85.63%), Query Frame = 2 Query: 449 PRAGQDIYGSEGSRFHITYDGGRMGRRSARARFDPDAGDVPSSTITPGDVAMVGGVSAAVAAVQRYNRKRFLDEEGQEYGRPRSPALQGRADRKGSKQTAVVSTLQLSLWSDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPELRAL 1450 PRAG+DIYGSEGSRFHI +DGGR GRRS RARF+P GD PS++ITPGDVAM+GGVSAAVAAVQRYNRKRF+DEEG G+ S L R+ R GS QTAVV+TLQL L+ DR GG GDVLA LD LSQTADVNS RG STLI+EVCLTLLRS +DW+GGTGS+K Y+ +GR N+R +K++P SRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWG +A++ GTY VATL+VAW+GL STPP+ EPR+G WF +D RD DD+ VE+SVVNR+SAL LL+WL DEAAEGRGENVLDVEVLWTPADPDDSLDR+DLD KWPELRAL Sbjct: 209 PRAGRDIYGSEGSRFHIRFDGGRGGRRSTRARFNPYDGDAPSTSITPGDVAMIGGVSAAVAAVQRYNRKRFVDEEGS--GQRPSAPLPPRSGRGGSSQTAVVTTLQLGLYCDRQGGQGDVLATLDKLSQTADVNSPRGLSTLINEVCLTLLRSGRDWLGGTGSVKMYASEGRSNSRGKKSSPVSRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGGFSAQKSGTYAVATLIVAWSGLNSTPPRAEPRRGGWFTRDSRDRD-DDRGVEFSVVNRQSALTLLEWLGDEAAEGRGENVLDVEVLWTPADPDDSLDREDLDTKWPELRAL 539
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A835ZEJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEJ7_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.690e-14 Identity = 76/234 (32.48%), Postives = 106/234 (45.30%), Query Frame = 2 Query: 752 VSTLQLSLWSDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSAL-NLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPELRAL 1450 V LQ++L + G +LA L +++ A+ +S+ G ST +SEVCL L+R DWI + ++P A RA+ FN A+ ER+K ERETVS S S T V T+++A G Q E +N SAL N+L +A +A GENVL VE+LWTP +P +SLDR + +PEL L Sbjct: 201 VVKLQVALNASDRSSRG-ILAQLKSIAERAETSSRGGLSTAVSEVCLALVRRQPDWIASASQYEYFAP-----------RSAERAEAVFNTYAIAERTKVERETVSRFGGEDLSDSRRSDGVRPEDLGKPTQAVVTIVLALKGESLKRFQLE-----------------------RSINSASALRNVLTQVAGDATTDDGENVLGVELLWTPEEPWESLDRQAVLEDFPELMDL 399
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A7S0QBA5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QBA5_9EUKA) HSP 1 Score: 77.8 bits (190), Expect = 2.290e-12 Identity = 64/211 (30.33%), Postives = 91/211 (43.13%), Query Frame = 2 Query: 818 LDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPELRAL 1450 L L++TAD +S G L+S+ CL LRS KDW+ + +T K ++ + +NR ++ERSKWE E S T + TY+VATL+V P T V R A++ L AD + E +N++ EVLWTP DP+D +DRDD+ +PEL L Sbjct: 79 LQSLARTADTSSYEGLQQLVSDTCLATLRSSKDWLAARTTSET------------KGLFSNDVESQYNRIVVKERSKWESEQKSLTR---------------TSAGEATYMVATLVVLLRNGSELPEVT------------------------GVNELREAISQLA--ADVSIE---DNLIAAEVLWTPEDPNDVMDRDDMFLNFPELVTL 233
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A7S2X718_9EUKA (Hypothetical protein n=3 Tax=Lotharella TaxID=74819 RepID=A0A7S2X718_9EUKA) HSP 1 Score: 78.2 bits (191), Expect = 9.990e-12 Identity = 71/234 (30.34%), Postives = 103/234 (44.02%), Query Frame = 2 Query: 743 TAVVSTLQLSLW-SDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPEL 1441 T V LQ++++ DR GP + L++L+ AD S+ G L+ E L LLRS++DW+ G G+ N+ + FN+A ++ER+K+E E G + PS Y++ T+MVA LR P R + RSAL + A EN+L EVLWTP DPDDSL R+++ K+PEL Sbjct: 185 TGTVMLLQVAVYCGDR--GPNSLYGRLNNLAAGADTWSEEGLRNLVQETTLALLRSEEDWVAGRSETFQKGMLGKSND----------VESAFNQALLKERAKFEEENTGRLKRVGANK---PS-----------YMIVTVMVA---LRDAPNLPTIR---------------------GLDEMRSALAMTS-----ARASIEENLLAAEVLWTPEDPDDSLTREEVFLKFPEL 363
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A7S4DSS3_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DSS3_9EUKA) HSP 1 Score: 76.6 bits (187), Expect = 3.110e-11 Identity = 70/234 (29.91%), Postives = 103/234 (44.02%), Query Frame = 2 Query: 743 TAVVSTLQLSLW-SDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPEL 1441 T V LQ++++ DR GP + L++L+ AD S+ G L+ E L LLRS++DW+ G G+ N+ + FN+A ++ER+K+E E G + PS Y++ T+MVA LR P R + RSAL + A EN+L EVLWTP DP+DSL R+++ K+PEL Sbjct: 182 TGTVMLLQVAVYCGDR--GPNSLYGRLNNLAAGADTWSEEGLRNLVQETTLALLRSEEDWVAGRSETFQKGMLGKSND----------VESAFNQALLKERAKFEEENTGRLKRVGANK---PS-----------YMIVTVMVA---LRDAPNLPTIR---------------------GLDEMRSALAMTS-----ARASIEENLLAAEVLWTPEDPEDSLTREEVFLKFPEL 360
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A8J7B5L9_9CYAN (DUF1517 domain-containing protein n=1 Tax=Nodosilinea sp. LEGE 07298 TaxID=2777970 RepID=A0A8J7B5L9_9CYAN) HSP 1 Score: 71.2 bits (173), Expect = 3.770e-10 Identity = 66/240 (27.50%), Postives = 106/240 (44.17%), Query Frame = 2 Query: 731 GSKQTAVVSTLQLSLWSDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPELRAL 1450 GS V+ LQ+ L ++ G D L+ L+ TAD + +G + L+ E L LLR W + K T A+++FNR A+ RS++ ET+SN ++ + + G Y++AT++VA G P D+ YS + R AL+ + ++ GEN+L VEVLWTP ++L D+L A++PEL+ + Sbjct: 41 GSNPPVAVAKLQVGLLAEARGLQDD----LNRLATTADTGTSQGLAKLLQETTLALLRHPDYWAYAAS--------------EDKQTRLLSAEQEFNRYALSARSRFSAETLSNVNNQLTQAEIQAKLPGDADQAPGEYILATVVVATQGKLDLP-----------------------DI-YSSADLRQALSHIGAVS-------GENLLAVEVLWTPQQSGETLSGDELIAQYPELKLI 231
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A7S3KY79_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KY79_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 3.780e-10 Identity = 102/406 (25.12%), Postives = 167/406 (41.13%), Query Frame = 2 Query: 245 WRERRRFLTILPLVFS-ATTAFSQASIAAVTGGRIGGGYTPPAAERTPSAPPMQQEQRY--QAPQRQKQYQPRAGQDIYGSEGSRFH-ITYDGGRMGRRSARARFDPDAGDVPSSTITPGDVAMVGGVSAAVAAVQRYNRKRFLDEEGQEYGRPRSPALQGRADRKGSKQTAVVSTLQLSLWSDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPELRAL 1450 W RR + L S A+ + S ++AAVTGGR GG + + +PS P M + + P + PR IY S H YD G + S S+T++ D+ ++GGV A +A N +R Q D++G A +++ L++ P ++ ++ ++Q D +SQ G TLISEVCL L+R Y + A +DF ++ RS++++ET+S + ++++T+ + S AT+ V F +G +D+ + R +NLL+W A A ++L EVLW+P D D+L R D+D ++PEL L Sbjct: 121 WTVFRRKAVLFALSVSLASASLSDPAMAAVTGGRAGGTFK---SSPSPSRPSMSRNYHSHGRTPMMPRTRMPRV---IYSSPPIGHHSYAYDQGGLMMASR------------STTMSTKDILVLGGV-AGLATYGMVNGRR-----------------QDNNDKEGG---ATATSIMLAVNVPDRNSPDSIIRRVNEIAQRTDTSSQAGVQTLISEVCLELVRQQASLQAAWSDSNHYKL-------------SRTALQDFQGRSVSNRSRYDQETMSKFNAQDYNANTSEAKNDS--------AKATMAVV---------------SVHFVTEG-------EDISHFKNMRADVVNLLRWTA---ATVPVTSLLAGEVLWSPQDATDTLTRRDIDERYPELTPL 441
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A0M0K0F2_9EUKA (Membrane protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K0F2_9EUKA) HSP 1 Score: 70.1 bits (170), Expect = 9.000e-10 Identity = 75/236 (31.78%), Postives = 105/236 (44.49%), Query Frame = 2 Query: 734 SKQTAVVSTLQLSLWSDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPEL 1441 S Q LQ++ + D + L+ ++ +AD +S+ G +L+S+ CL +LRS KDW+ + +T S D A +NR + ERSKWE E + TAP TY+VATL+V LRS P +P Q+G RD LQ LA AA +N+L EVLWTP D +D +DRD+L +PEL Sbjct: 49 SDQPGAALCLQVACYCDDR--QNSLFGKLNKIASSADTDSELGLQSLVSDTCLAILRSSKDWL----AARTESEIAGLLKNDVDAA--------YNRLVVTERSKWEVEQKA-------LKRTAPGQP--------TYMVATLVVL---LRSAQP-LKP-----ISQNGDLRD------------------ALQNLA--AAVSVDDNLLAAEVLWTPEDTNDVMDRDELFLNFPEL 226
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A1Z4JFP3_LEPBY (Uncharacterized protein n=1 Tax=Leptolyngbya boryana NIES-2135 TaxID=1973484 RepID=A0A1Z4JFP3_LEPBY) HSP 1 Score: 70.9 bits (172), Expect = 1.570e-9 Identity = 68/243 (27.98%), Postives = 105/243 (43.21%), Query Frame = 2 Query: 734 SKQTAVVSTLQLSLWSDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSNTPDR----GFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPELRAL 1450 S T V+ +Q+ L ++ ++ A LD + + AD +S G + ++ E L LLR+ + W+ GT K T A +FNR A+ ERSK+ ET+SN ++ S+ T S+ A G Y+V TL+V G P ++ + RRS L +D+ +L +EVLWTP D L RDDL A++P L+ + Sbjct: 122 STPTISVAKVQVGLLAEAR----ELKADLDRIGEKADTSSSEGLAQVLQEASLALLRNPQYWVYGTTEAKQ--------------TRLEAASGEFNRLALSERSKFSAETLSNVNNQLKQASSSALTLADKDSALAEAPGEYIVVTLLVGTQGKLQLP-----------------------EINSAEDLRRSLSQLGSVSSDQ--------LLALEVLWTPQADGDVLTRDDLLAEYPNLKLV 315
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Match: A0A7S0H5R7_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H5R7_9EUKA) HSP 1 Score: 70.9 bits (172), Expect = 2.350e-9 Identity = 66/239 (27.62%), Postives = 105/239 (43.93%), Query Frame = 2 Query: 743 TAVVSTLQLSLW-SDRTGGPGDVLAALDHLSQTADVNSQRGFSTLISEVCLTLLRSDKDWIGGTGSLKTYSPDGRPNNRDRKATPASRAKRDFNRAAMRERSKWERETVSN-----TPDRGFSSSTAPSWGSSNARQGGTYLVATLMVAWAGLRSTPPQTEPRKGAWFWQDGGGRDNDDKDVEYSVVNRRSALNLLQWLADEAAEGRGENVLDVEVLWTPADPDDSLDRDDLDAKWPEL 1441 T V LQ++++ DR G + + L++L + AD S++G L+ E + LLRS++DW+ G G+ N+ + FN A ++ER+K+E E VS TPD+ PS ++V T++VA S P + + + R+AL + A EN+L EVLWTP D D+L R+++ K+PEL Sbjct: 180 TGTVMLLQVAVYCGDR--GKNSLFSRLNNLGREADTWSEQGLKNLVQESTIALLRSEEDWVAGRSETFQKGMFGKSND----------VESAFNAALLQERAKFEEENVSKRSKIQTPDK-------PS-----------HMVVTILVALRDAPSLPTVS------------------------GIEDMRAALAMTS-----ARASIEENLLAAEVLWTPEDSSDTLSREEVFLKFPEL 359 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14411.3262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14411.3262.1 >prot_L-elsbetiae_contig14411.3262.1 ID=prot_L-elsbetiae_contig14411.3262.1|Name=mRNA_L-elsbetiae_contig14411.3262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=482bp MRPTGGLIAAVATVVVATKGAHAFVPPTRVFSWRTRAASQHQQHPPELAVback to top mRNA from alignment at L-elsbetiae_contig14411:1011..4369+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14411.3262.1 ID=mRNA_L-elsbetiae_contig14411.3262.1|Name=mRNA_L-elsbetiae_contig14411.3262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3359bp|location=Sequence derived from alignment at L-elsbetiae_contig14411:1011..4369+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14411:1011..4369+ >mRNA_L-elsbetiae_contig14411.3262.1 ID=mRNA_L-elsbetiae_contig14411.3262.1|Name=mRNA_L-elsbetiae_contig14411.3262.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2892bp|location=Sequence derived from alignment at L-elsbetiae_contig14411:1011..4369+ (Laminarionema elsbetiae ELsaHSoW15)back to top |