mRNA_L-elsbetiae_contig1441.3256.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1441.3256.1 vs. uniprot
Match: D7FPE3_ECTSI (Set and mynd domain containing n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE3_ECTSI) HSP 1 Score: 579 bits (1492), Expect = 9.780e-202 Identity = 295/373 (79.09%), Postives = 317/373 (84.99%), Query Frame = 1 Query: 187 IPYRHTTIKWGHESNSGSDPPNHGSG---GGAVGASARRRGQLDPRFQVRRNPARPLRGRGVFAVEAVPAGTQVLVAKQAAALPRGRYRPAFCRRCLALLDKSLLIKCRRCEDRFCGKECVIAAAGEGTHEATCDFVEGLGEECLEKLGEGDNAAAAEKDILRLTVECLARRGAGLSDEEEWVEIDDLVLPEREREGGRGEGGGDGMLEGDAVREAEARLNSRGLAVSAEEIQTVHRRLRRNFHTVQPEPLGRLLPPTVIGVFPAASLVNHSCEPNACFHSRRAGPGGQMLEYVLRCTEDVAAGEEVCVSYLAHCADATAQQGRRELLQDVWGFSCDCQRCEDDSKPAGSSSGDWRVTKMLENIEALLENARS 1296 +PYRH I W ++ + HGSG ARRRGQLDPRFQVRRNPARP RGRG+FAVEAVPAGT+VLVAKQAAALPR RYRPAFCRRCL LLDKSLLIKCRRCEDRFCGKECVIAAAGEGTHE TC VEGLGEE L +LG GDNAAA E DILRLTVEC++RRGAGLSDEEEW+EIDDLVLPE E G GEG G G LE D +REA+ARLN GL VSAEEIQTVHRRLRRNFHTVQPEPLGRLLPPTV+GVFPAASLVNHSCEPNACFHSRRAGP G LE LRCT DV+AGEEVCVSYLAHCADA ++GRRELLQ+VWGFSCDC RCEDD+KP G+SSGDWRVTKML+NIEALLENA++ Sbjct: 77 VPYRHARITWSEPNSKNNGSSKHGSGCSXXXXXXXCARRRGQLDPRFQVRRNPARPKRGRGIFAVEAVPAGTEVLVAKQAAALPRDRYRPAFCRRCLTLLDKSLLIKCRRCEDRFCGKECVIAAAGEGTHEVTCGLVEGLGEEQLSELGRGDNAAATETDILRLTVECMSRRGAGLSDEEEWIEIDDLVLPEDE---GGGEGSGGGTLEPDVIREAQARLNDGGLEVSAEEIQTVHRRLRRNFHTVQPEPLGRLLPPTVVGVFPAASLVNHSCEPNACFHSRRAGPEGPPLELALRCTTDVSAGEEVCVSYLAHCADAATKEGRRELLQNVWGFSCDCPRCEDDTKP-GASSGDWRVTKMLQNIEALLENAQN 445
BLAST of mRNA_L-elsbetiae_contig1441.3256.1 vs. uniprot
Match: A0A6H5KH60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH60_9PHAE) HSP 1 Score: 330 bits (845), Expect = 9.530e-108 Identity = 204/301 (67.77%), Postives = 220/301 (73.09%), Query Frame = 1 Query: 1 MRFPG-SQTQILAENSHSGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNGGGIPYRHTTIKWGHESNSGSDPPNHGSG---GGAVGASARRRGQLDPRFQVRRNPARPLRGRGVFAVEAVPAGTQVLVAKQAAALPRGRYRPAFCRRCLALLDKSLLIKCRRCEDRFCGKECVIAAAGEGTHEATCDFVEGLGEECLEKLGEGDNAAAAEKDILRLTVECLARRGAGLSDEEEWVEIDDLVLPEREREGGRGEGGGDGMLEGDAVREAEARLNSRGLAVSAEEIQTVHRR 891 M FPG SQTQ++AE S +G XXXXXXXXXXXXXXXX T +PYRH I W ++ + HGSG ARRRGQLDPRFQVRRNPARP RGRG+FAVEAVPAGT+VLVA+QAAALPR RYRPAFCRRCL LLDKSLLIKCRRCEDRFCGKECVIAAAGEGTHE TC VEGLGEE L +LG GDNAAA E DILRLTVEC++RRGAGLSDEEEW+EIDDLVLPE E GG LE D +REA+ARLN GL VSAEEIQTVHRR Sbjct: 19 MGFPGGSQTQVVAETSETGSXXXXXXXXXXXXXXXXSTTISYGDTASPTATAGRTIPLT----VPYRHARITWSEPNSKNNGSSKHGSGCSXXXXXXXCARRRGQLDPRFQVRRNPARPKRGRGIFAVEAVPAGTEVLVARQAAALPRDRYRPAFCRRCLTLLDKSLLIKCRRCEDRFCGKECVIAAAGEGTHEVTCGMVEGLGEEQLSELGRGDNAAATETDILRLTVECMSRRGAGLSDEEEWIEIDDLVLPEDEGXXXXXXGG---TLEPDVIREAQARLNDGGLEVSAEEIQTVHRR 312
BLAST of mRNA_L-elsbetiae_contig1441.3256.1 vs. uniprot
Match: D7FPE5_ECTSI (SET and MYND domain containing 1b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE5_ECTSI) HSP 1 Score: 138 bits (347), Expect = 2.060e-32 Identity = 123/363 (33.88%), Postives = 166/363 (45.73%), Query Frame = 1 Query: 223 ESNSGSDPPNHGSGGGAVGASARRRGQLDPRFQVRRNPARPLRGRGVFAVEAVPAGTQVLVAKQAAALPRGRYRPAFCRRCLALLDK-SLLIKCRRCEDRFCG--KECVIAAAGEGTHE-ATCDFVEGLGEECLEKLGEGDNAAAAEKDILRLTVECLARRGAGLSDEEEWVEIDDLVLPEREREGGRGEGGGDGMLEGDAVREAEARLNSR--GLAVSAEEIQTVHRRLRRNFHTVQPEPLGRLLPPTVIGVFPAASLVNHSCEPNACFH--SRRAGPGGQ-MLEYVLRCTEDVAAGEEVCVSYLAHCADATAQQGRRELLQDVWGFSCDCQRC-----EDDSKPAGSSSGDWRVTKMLENI 1269 ES S S P S G ARR LD R +VR +P R GRG+FA+ +PAGT+V+ AAA+ R R C CL D L C FC K+ G H ATC+ + L C G +KD LRL + RR AGL D+ EW ++ L + E M A RL +S E++Q ++RR+ RN HTV P + +V G+FP +LVNHSC PN FH + + P G+ +++ VLR ++ AG+E+C SYL+ + RR+LL WGF C C RC E+ + D R KMLE + Sbjct: 7 ESASESSPETRSSSDGDPTRYARRTANLDARVEVRFDPKR---GRGLFALRDIPAGTEVMRVPAAAAVLLDRSRKGSCSGCLLPTDTVGSLEACHGFPLSFCAACKKATTVGGVSGVHNSATCELTKELNTICATSGG-------IDKDSLRLAADVFVRRKAGLFDDSEWGLLNSLESHDNEAHT---------MSLAPAELHKCTRLFKTLVDTNISDEDVQAMYRRITRNAHTVSPN-TSKPGFGSVQGLFPCGALVNHSCLPNTFFHCVTESSSPEGRPVVKQVLRSIRNIRAGDELCYSYLSSGSAVGTVSERRDLLMG-WGFRCACARCLSEAEEEKRLRRQRTPIDERALKMLERL 348
BLAST of mRNA_L-elsbetiae_contig1441.3256.1 vs. uniprot
Match: A0A812RGT9_9DINO (ATXR2 protein n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A812RGT9_9DINO) HSP 1 Score: 72.4 bits (176), Expect = 1.770e-10 Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 955 IGVFPAASLVNHSCEPNACFHSRRAGPGGQMLEYVLRCTEDVAAGEEVCVSYLAHCADATAQQGRRELLQDVWGFSCDCQRCEDDSKPAGSS 1230 +G+F L NHSC PNA FH+ G Q Y LR +A+GEEVC+SY+ + Q RR ++Q+ +GF C C RC ++S+ A + Sbjct: 210 LGLFFWLHLANHSCCPNAFFHTHTQGGSAQATLYALR---PLASGEEVCISYVDGQTLLSPVQVRRRIIQNQFGFLCVCSRCREESREANET 298
BLAST of mRNA_L-elsbetiae_contig1441.3256.1 vs. uniprot
Match: A0A383W211_TETOB (SET domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W211_TETOB) HSP 1 Score: 73.9 bits (180), Expect = 2.290e-10 Identity = 42/105 (40.00%), Postives = 62/105 (59.05%), Query Frame = 1 Query: 955 IGVFPAASLVNHSCEPNACFHSRRAGPGGQMLEYVLRCTEDVAAGEEVCVSYLAHCADATAQQGRRELLQDVWGFSCDCQRCEDDSKPAGSSSGDWRVTKMLENI 1269 +GV+PAA+++NH+C PNA H+ G V+R ED+AAG++V +SYL A A R+E L+ WGF C C RC+ +++ AGSSS + L + Sbjct: 535 LGVWPAAAMINHACCPNA--HALLIGD-----RLVVRAAEDIAAGQQVTLSYLGPQLFAPAAV-RQEELRQQWGFDCGCARCKAEARYAGSSSXXXXESTTLSQL 631
BLAST of mRNA_L-elsbetiae_contig1441.3256.1 vs. uniprot
Match: A0A0E0QFL4_ORYRU (SET domain-containing protein n=6 Tax=Oryza TaxID=4527 RepID=A0A0E0QFL4_ORYRU) HSP 1 Score: 72.4 bits (176), Expect = 3.470e-10 Identity = 39/99 (39.39%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 919 PEPLGRLLPPTVIGVFPAASLVNHSCEPNACFHSRRAGPGGQMLEYVLRCTEDVAAGEEVCVSYLAHCADATAQQGRRELLQDVWGFSCDCQRCEDDSK 1215 P+PL + V+P ASL+NH C PNAC PG + V+R D+ G EVC+SY A A+ + ++ LL+D +GF C+C+RC+ +SK Sbjct: 189 PQPLRKA---RAYAVYPRASLLNHDCLPNACHFDYADRPGPGNTDIVVRALHDITEGREVCLSYFA--ANWQYKDRQQRLLED-YGFRCECERCQVESK 281
BLAST of mRNA_L-elsbetiae_contig1441.3256.1 vs. uniprot
Match: A2YSB4_ORYSI (SET domain-containing protein n=8 Tax=Oryza TaxID=4527 RepID=A2YSB4_ORYSI) HSP 1 Score: 72.4 bits (176), Expect = 3.530e-10 Identity = 39/99 (39.39%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 919 PEPLGRLLPPTVIGVFPAASLVNHSCEPNACFHSRRAGPGGQMLEYVLRCTEDVAAGEEVCVSYLAHCADATAQQGRRELLQDVWGFSCDCQRCEDDSK 1215 P+PL + V+P ASL+NH C PNAC PG + V+R D+ G EVC+SY A A+ + ++ LL+D +GF C+C+RC+ +SK Sbjct: 191 PQPLRKA---RAYAVYPRASLLNHDCLPNACHFDYADRPGPGNTDIVVRALHDITEGREVCLSYFA--ANWQYKDRQQRLLED-YGFRCECERCQVESK 283
BLAST of mRNA_L-elsbetiae_contig1441.3256.1 vs. uniprot
Match: A0A0E0LSB0_ORYPU (SET domain-containing protein n=2 Tax=Oryza TaxID=4527 RepID=A0A0E0LSB0_ORYPU) HSP 1 Score: 72.0 bits (175), Expect = 4.710e-10 Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 961 VFPAASLVNHSCEPNACFHSRRAGPGGQMLEYVLRCTEDVAAGEEVCVSYLAHCADATAQQGRRELLQDVWGFSCDCQRCEDDSK 1215 V+P ASL+NH C PNAC PG + V+R D+ G EVC+SY A A+ + ++ LL+D +GF C+C+RC+ +SK Sbjct: 202 VYPRASLLNHDCLPNACHFDYADRPGPGNTDIVVRALHDITEGREVCLSYFA--ANWQYKDRQQRLLED-YGFRCECERCQVESK 283
BLAST of mRNA_L-elsbetiae_contig1441.3256.1 vs. uniprot
Match: A0A0G2I9J1_9PEZI (SET domain-containing protein n=1 Tax=Diaporthe ampelina TaxID=1214573 RepID=A0A0G2I9J1_9PEZI) HSP 1 Score: 72.8 bits (177), Expect = 4.870e-10 Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = 1 Query: 958 GVFPAASLVNHSCEPNACFHSRRAGPGGQMLEYVLRCTEDVAAGEEVCVSYLAHCADATAQQGRRELLQDVWGFSCDCQRCEDDSKPAGS 1227 GV+P+AS NH+C+PN R G +V R D+AAGEE+C+SYL ++ R LL+ WGF C CQRC+ D + A S Sbjct: 265 GVWPSASYFNHNCDPNT--DKERVG-----RTWVFRAKRDIAAGEEICISYLGKDMGILREE-RTALLKKTWGFDCICQRCKGDDRSAHS 346
BLAST of mRNA_L-elsbetiae_contig1441.3256.1 vs. uniprot
Match: A0A3B6RMB5_WHEAT (SET domain-containing protein n=15 Tax=Triticeae TaxID=147389 RepID=A0A3B6RMB5_WHEAT) HSP 1 Score: 70.5 bits (171), Expect = 1.470e-9 Identity = 36/85 (42.35%), Postives = 50/85 (58.82%), Query Frame = 1 Query: 961 VFPAASLVNHSCEPNACFHSRRAGPGGQMLEYVLRCTEDVAAGEEVCVSYLAHCADATAQQGRRELLQDVWGFSCDCQRCEDDSK 1215 V+P ASL+NH C PNAC PG + V+R + G+EVC+SY A A+ +R LL+D +GF C+C RC+ +SK Sbjct: 200 VYPRASLLNHDCLPNACHFDYADRPGPGNTDIVVRALHGITEGKEVCISYFA--ANWRYADRQRRLLED-YGFRCECDRCQIESK 281 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1441.3256.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1441.3256.1 >prot_L-elsbetiae_contig1441.3256.1 ID=prot_L-elsbetiae_contig1441.3256.1|Name=mRNA_L-elsbetiae_contig1441.3256.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=432bp MRFPGSQTQILAENSHSGEGGGDGGSGSGSRTTITYSGRPASSSGSSASTback to top mRNA from alignment at L-elsbetiae_contig1441:436..3060- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1441.3256.1 ID=mRNA_L-elsbetiae_contig1441.3256.1|Name=mRNA_L-elsbetiae_contig1441.3256.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2625bp|location=Sequence derived from alignment at L-elsbetiae_contig1441:436..3060- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1441:436..3060- >mRNA_L-elsbetiae_contig1441.3256.1 ID=mRNA_L-elsbetiae_contig1441.3256.1|Name=mRNA_L-elsbetiae_contig1441.3256.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2592bp|location=Sequence derived from alignment at L-elsbetiae_contig1441:436..3060- (Laminarionema elsbetiae ELsaHSoW15)back to top |