mRNA_L-elsbetiae_contig144.3246.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig144.3246.1
Unique NamemRNA_L-elsbetiae_contig144.3246.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig144.3246.1 vs. uniprot
Match: A0A6H5JD73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD73_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 1.660e-113
Identity = 197/272 (72.43%), Postives = 219/272 (80.51%), Query Frame = 1 
Query:  118 RWDIAAMLLATCGLMIAAAGGIGGGGILVPIYILVLRFSPKYAVPLSNITIFGGAITNTFLNMRKRHPLADRPLVDWDLILVMEPLTIGGALVGSFVQKVLPEIVLTLSMILLLLVTADRTLRKGVKAFKKESNSKVSEAADGFKVPISTP-----DKTDDALLGNTAKPSSSYGAA---EDGKGTFSLAVLAPSC--AAAANADLETPEEAAMIPTTAPASPAEFSDKLSTHKTDALQRLLDEEKHTSFAKVGIMSAVFVALLTVNLLKGG 903
            RWD+A ++LA+ GLMIAAAGGIGGGGILVPI+ILVLRFSPKYAVPLSNITIFGGAITNTFLNM+KRHPLADRPLVDWDLILVMEPLTIGGALVGSF+QKVLPE+VLTLSM+LLL+ TADRT RKG+KAFKKES+ +  E        +S+      DK+   LLGN  K   SYGAA   EDGKGTF+  VLAPS   AA A  D+ETPEEA MIPTTAP +P   SD  S+ K DALQ LLDEE+HTS AKVGIM+AVFV LL VNLLKGG
Sbjct:   32 RWDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFSPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKVLPEVVLTLSMVLLLVATADRTFRKGIKAFKKESSVQAKELGGTADAKVSSAAAISKDKSHTTLLGNGTK---SYGAANGVEDGKGTFTPTVLAPSSTPAAIAAGDVETPEEAMMIPTTAPVTPVGTSDLSSSEKADALQLLLDEEQHTSLAKVGIMTAVFVVLLIVNLLKGG 300
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BLAST of mRNA_L-elsbetiae_contig144.3246.1 vs. uniprot
Match: D8LFQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ6_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 1.930e-92
Identity = 168/230 (73.04%), Postives = 185/230 (80.43%), Query Frame = 1 
Query:  121 WDIAAMLLATCGLMIAAAGGIGGGGILVPIYILVLRFSPKYAVPLSNITIFGGAITNTFLNMRKRHPLADRPLVDWDLILVMEPLTIGGALVGSFVQKVLPEIVLTLSMILLLLVTADRTLRKGVKAFKKESN------------SKVSEAADGFKVPISTPDKTDDALLGNTAKPSSSYGAA---EDGKGTFSLAVLAPSCAAAANA--DLETPEEAAMIPTTAPASPA 759
            WD+A ++LA+ GLMIAAAGGIGGGGILVPI+ILVLRF PKYAVPLSNITIFGGAITNTFLNM+KRHPLADRPLVDWDLILVMEPLTIGGALVGSF+QKVLPE+VLTLSM+LLL+ TADRT RKG+KAFKKES+            +KVS AA      IS  DK+   LLGN  K   SYGAA   EDGKGTF+ AVLAPS + AA A  D+ETPEEA MIPTTAP SPA
Sbjct:   12 WDVATVILASFGLMIAAAGGIGGGGILVPIFILVLRFGPKYAVPLSNITIFGGAITNTFLNMKKRHPLADRPLVDWDLILVMEPLTIGGALVGSFIQKVLPEVVLTLSMVLLLVATADRTFRKGLKAFKKESSLQQAKELGGTADAKVSSAA-----AISN-DKSHTTLLGNGTK---SYGAANGVEDGKGTFTTAVLAPSSSPAAIAAGDVETPEEAMMIPTTAPVSPA 232
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BLAST of mRNA_L-elsbetiae_contig144.3246.1 vs. uniprot
Match: D7FV46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV46_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 8.870e-69
Identity = 135/272 (49.63%), Postives = 175/272 (64.34%), Query Frame = 1 
Query:   91 WHKDLLPMNRWDIAAMLLATCGLMIAAAGGIGGGGILVPIYILVLRFSPKYAVPLSNITIFGGAITNTFLNMRKRHPLADRPLVDWDLILVMEPLTIGGALVGSFVQKVLPEIVLTLSMILLLLVTADRTLRKGVKAFKKESNSKVSEAADGFKVPISTPDKTDDALLGNTAKPSSSYGAAEDGKGTFSLAVLAPSCAAAANADLETPEEAAMIPTTAPASPAEFS-DKLSTHKTDALQRLLDEEKHTSFAKVGIMSAVFVALLTVNLLKGG 903
            WHK L P++ WD+  + LA  GLMIAAAGGIGGGGILVP+YILVL F PK+A+PLSNITIFGGAITNT LN+ KRHP ADRPLVDWDLILVMEPLTIGGALVGSF+ KVLP+ +L + +I+LL  TA+RTLRKG+K++ KE+ +++ E  +                                 +GT  L V+  S     NAD    E  A++     AS    + D+    +   L++L++ E+ T   KVG+++ VFV +L+VNLLKGG
Sbjct:  110 WHKPLHPIDGWDVTGVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNLSKRHPAADRPLVDWDLILVMEPLTIGGALVGSFINKVLPDWILAIMLIVLLAATANRTLRKGIKSYNKETEAQLKEKLN---------------------------------RGTSELTVVHESLLEEDNAD----EGDALLG----ASEKNLTGDREVDDREYELKQLMEGERFTPLFKVGVLTGVFVVVLSVNLLKGG 340
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BLAST of mRNA_L-elsbetiae_contig144.3246.1 vs. uniprot
Match: A0A835ZGS5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS5_9STRA)

HSP 1 Score: 229 bits (583), Expect = 9.130e-68
Identity = 154/325 (47.38%), Postives = 190/325 (58.46%), Query Frame = 1 
Query:    1 MPAEGLLLAVANSDADAVDEFGHEPSFS------------PGW--HKDLLPMNRWDIAAMLLATCGLMIAAAGGIGGGGILVPIYILVLRFSPKYAVPLSNITIFGGAITNTFLNMRKRHPLADRPLVDWDLILVMEPLTIGGALVGSFVQKVLPEIVLTLSMILLLLVTADRTLRKGVKAFKKESNSKVSEAADGFKVPISTPDKTDDALLGNTAKPSSSYGAAEDGKGTFSLAVLAPSCAAAANADLETPEEAAMIPT----------TAPASPAEFSDKLSTHKTDALQRLLDEEKHTSFAKVGIMSAVFVALLTVNLLKGG 903
            +P   L L +A  D       GH  +F             PG   HK LLP++ WD A +  A  GLMIAA GGIGGGGILVPI++L++RF PKYA+PLSNITIFGGAITN  LN+ KRHPLADRPLVDWDLILVMEPLTIGGALVGSF+ KVLPE +L LS+++LL +TA RTL+KG   + KES +   +A  G    ++T  +     L             E+G        L P   AA ++       AA +PT          T  AS AE  +   TH    LQ+LL+EE+ T   KV I+S VFV +L VN+LKGG
Sbjct:   21 LPLAALFLVLAAVDRANSTSNGHHDNFEGMRFLADEPIALPGQSHHKKLLPLDAWDKAGIFAAIIGLMIAAGGGIGGGGILVPIFVLIMRFHPKYAIPLSNITIFGGAITNVALNLSKRHPLADRPLVDWDLILVMEPLTIGGALVGSFINKVLPEEILALSLVILLTLTAHRTLKKGASMYAKESRAMAQQAKAGKMSELTTLHEAQAEEL-----------VEEEGVS------LLPKGRAAEDST------AAHLPTGDYVEGGYDDTEQASMAE-EEARRTHLQ--LQKLLEEERLTPRRKVAILSGVFVVVLAVNILKGG 319
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BLAST of mRNA_L-elsbetiae_contig144.3246.1 vs. uniprot
Match: A0A7R9YCS1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCS1_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.760e-62
Identity = 111/173 (64.16%), Postives = 133/173 (76.88%), Query Frame = 1 
Query:   13 GLLLAVANSDADAVDEFGHEPSFSPGWHKDLLPMNRWDIAAMLLATCGLMIAAAGGIGGGGILVPIYILVLRFSPKYAVPLSNITIFGGAITNTFLNMRKRHPLADRPLVDWDLILVMEPLTIGGALVGSFVQKVLPEIVLTLSMILLLLVTADRTLRKGVKAFKKESNSKVS 531
            G+LL ++   A    E   E S  P  HKDL P++  D+  MLLA  GLMIAA GGIGGGGILVP+YILVL F PK+A+PLSNITIFGGAITNT LN  KRHPLADRPLVDWDLILVMEPLTI GALVGSF+ K+LPE +LTL ++LLL  T+ RT++KG+K +K+E+  + S
Sbjct:   30 GVLLLLSYVMAQ---EMAEESSIEP--HKDLFPLSARDVIGMLLAIIGLMIAAGGGIGGGGILVPLYILVLDFHPKFAIPLSNITIFGGAITNTILNSPKRHPLADRPLVDWDLILVMEPLTIAGALVGSFLNKILPEWILTLLLVLLLGATSVRTMKKGLKVYKRETEEQKS 197
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BLAST of mRNA_L-elsbetiae_contig144.3246.1 vs. uniprot
Match: A0A7S2FP42_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FP42_9STRA)

HSP 1 Score: 204 bits (518), Expect = 2.600e-58
Identity = 133/314 (42.36%), Postives = 178/314 (56.69%), Query Frame = 1 
Query:   10 EGLLLAVANSDADAVDE-----------FGHE-----PSFSPGWHKDLLPMNRWDIAAMLLATCGLMIAAAGGIGGGGILVPIYILVLRFSPKYAVPLSNITIFGGAITNTFLNMRKRHPLADRPLVDWDLILVMEPLTIGGALVGSFVQKVLPEIVLTLSMILLLLVTADRTLRKGVKAFKKESNSKVSEAADGFKVPISTPDKTDDALLGNTAKPSSSYGAAEDGKGTFSLAVLAPSCAAAANADLETPEEAAMIPTTAPASPAEFSDKLSTHKTDALQRLLDEEKHTSFAKVGIMSAVFVALLTVNLLKGG 903
            EG +  VA S + A DE           F  E     P     WHK L P++  D   + L+ CGL+IA+ GGIGGGGILVP+YILV+ F+PKYA+PLSN+T+FGGA+ N F N+ KRHP ADRPLVDWDLILVMEPLTI GAL+GSF+ K+LPE+VLT+ +++LL  T   T  KG+K +KKE+  K +EAA   K       +++ A + N+                      A +  A + + L   E+  +I                   +  LQ++ DEEK     KVG++ AVFV +L +NLLKGG
Sbjct:   40 EGPVPLVAGSGSLATDEESPSKDSSESTFSEEEKEEIPDSDMHWHKKLFPLDSTDYLGIFLSCCGLIIASGGGIGGGGILVPLYILVMGFTPKYAIPLSNVTVFGGAVVNYFTNITKRHPNADRPLVDWDLILVMEPLTILGALIGSFLNKLLPELVLTILLVMLLGCTTYETTTKGIKVYKKET--KENEAAAKVK-------ESELAKVHNSEN--------------------AEAVDAESQSFLGDEEKKPII-------------------SSELQKIYDEEKTVPLFKVGVLWAVFVVVLAINLLKGG 305
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BLAST of mRNA_L-elsbetiae_contig144.3246.1 vs. uniprot
Match: A0A448YZY0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZY0_9STRA)

HSP 1 Score: 201 bits (510), Expect = 6.770e-57
Identity = 124/282 (43.97%), Postives = 169/282 (59.93%), Query Frame = 1 
Query:   67 HEPSFSPGWHKDLLPMNRWDIAAMLLATCGLMIAAAGGIGGGGILVPIYILVLRFSPKYAVPLSNITIFGGAITNTFLNMRKRHPLADRPLVDWDLILVMEPLTIGGALVGSFVQKVLPEIVLTLSMILLLLVTADRTLRKGVKAFKKESNSKVSEAADGFKVPISTPDKTDDALLGNTAKPSSSYGAAEDGKGTFSLAVLAPSCAAAANADLETPEEAAMIPTTAPASPAEFS-DKLSTHKTDA--LQRLLDEEKHTSFAKVGIMSAVFVALLTVNLLKGG 903
            H+P +    H  L P++  D     +A CGLM+AA GGIGGGGILVPIYILV+ FSPK+ +PLSN+T+FGGAI N  LN +KRHPLADRPL+DWDLILVMEPLTI GAL+G+F+ K+LPE +LT  ++LLL  TA+ +L+K +K +KKES     E   G K     PD T ++ L + +K        + G                 + DL+  E           SP     + +   +TDA  LQ++L+EE+ T    V ++  +F+ +L +NLLKGG
Sbjct:   83 HKPVYDEN-HAPLFPLSMSDRVGFTMAICGLMLAAGGGIGGGGILVPIYILVMGFSPKHGIPLSNVTVFGGAIANMILNTQKRHPLADRPLIDWDLILVMEPLTIAGALIGAFLNKILPEQLLTFMLVLLLSFTANNSLKKAIKMYKKESRILRQE---GLK-----PDGTKESELTHISKQEEEEDMNQAGNELLE------------DMDLQEGE-----------SPGSGDRNVMMGDQTDAQQLQKILEEERKTPLFNVKVLVGLFIVVLAMNLLKGG 332
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BLAST of mRNA_L-elsbetiae_contig144.3246.1 vs. uniprot
Match: A0A6H5JFJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ9_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 1.790e-56
Identity = 127/282 (45.04%), Postives = 170/282 (60.28%), Query Frame = 1 
Query:   91 WHKDLLPMNRWDIAAMLLATCGLMIAAAGGIGGGGILVPIYILVLRFSPKYAVPLSNITIFGGAITNTFLNMRKRHPLADRPLVDWDLILVMEPLTIG-GALVGSFVQ----------KVLPEIVLTLSMILLLLVTADRTLRKGVKAFKKESNSKVSEAADGFKVPISTPDKTDDALLGNTAKPSSSYGAAEDGKGTFSLAVLAPSCAAAANADLETPEEAAMIPTTAPASPAEFSDKLSTHKTDALQRLLDEEKHTSFAKVGIMSAVFVALLTVNLLKGG 903
            WHK L P++ WD+ A+ LA  GLMIAAAGGIGGGGILVP+YILVL F PK+A+PLSNITIFGGAITNT LN+ KRHP ADRPLVDWDLILVMEPLT    +LV +  +          +VLP+ +L + +I+LL  TA+RTLRKG+K++ KE+ +++ E  +                                 +GT  L V+  S     NAD    E  A++   A +  +   D+    +   L++L++ E+ T   KVG+++ VFV +L VNLLKGG
Sbjct:  118 WHKPLHPIDGWDVTAVGLACIGLMIAAAGGIGGGGILVPLYILVLGFDPKHAIPLSNITIFGGAITNTVLNISKRHPAADRPLVDWDLILVMEPLTNDLPSLVHAMFKLIQRHVPGQKRVLPDWILAIMLIVLLAATANRTLRKGIKSYNKETEAQLKEKLN---------------------------------RGTSELTVVHESLVEEDNAD----EGDALL---AASEKSLTGDREVDDREYELKQLIEGERFTPLFKVGVLTGVFVVVLAVNLLKGG 359
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BLAST of mRNA_L-elsbetiae_contig144.3246.1 vs. uniprot
Match: A0A6V1T5B1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1T5B1_HETAK)

HSP 1 Score: 199 bits (507), Expect = 1.940e-56
Identity = 99/154 (64.29%), Postives = 124/154 (80.52%), Query Frame = 1 
Query:   79 FSPGWHKDLLPMNRWDIAAMLLATCGLMIAAAGGIGGGGILVPIYILVLRFSPKYAVPLSNITIFGGAITNTFLNMRKRHPLADRPLVDWDLILVMEPLTIGGALVGSFVQKVLPEIVLTLSMILLLLVTADRTLRKGVKAFKKESNSKVSEAA 540
            + P  HKDLLP++  D   + L++ GLMIAA GGIGGGGILVP+YILVL FSPKYA+PLSNITIFGGAITNT LN+ KRHP+ADRPLVDWDLI++MEPLTI GA+ GSFV KVLP+ +L + +ILLL  T+ +T+ KGV  +KKE+ +  + A+
Sbjct:   83 YDPSAHKDLLPLDGTDFLGVFLSSIGLMIAAGGGIGGGGILVPLYILVLGFSPKYAIPLSNITIFGGAITNTILNIPKRHPVADRPLVDWDLIMIMEPLTIAGAIAGSFVNKVLPDWILAICLILLLGATSYKTITKGVSTYKKETKALAAAAS 236
[Close]
BLAST of mRNA_L-elsbetiae_contig144.3246.1 vs. uniprot
Match: A0A7S3K149_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K149_9STRA)

HSP 1 Score: 192 bits (489), Expect = 3.850e-54
Identity = 117/271 (43.17%), Postives = 160/271 (59.04%), Query Frame = 1 
Query:   94 HKDLLPMNRWDIAAMLLATCGLMIAAAGGIGGGGILVPIYILVLRFSPKYAVPLSNITIFGGAITNTFLNMRKRHPLADRPLVDWDLILVMEPLTIGGALVGSFVQKVLPEIVLTLSMILLLLVTADRTLRKGVKAFKKESNSKVSEAADGFKVPISTPDKTDDALLGNTAKPSSSYGAAEDGKGTFSLAVLAPSCAAAANADLETPEEAAMIPTTAPASPAEFSDKLSTHKTDALQRLLDEEKHTS-FAKVGIMSAVFVALLTVNLLKGG 903
            HK   P+ R DI  +L A  GLMIAA GGIGGGG+LVPIY+LVL F PK+A+PLSN+T+ GGAITN  +N  KRHPLADRPLVDWDL+++MEPLT+ GAL G F+ K+ PEIVLT+ +++LL +T +RT +KG+K +KKE+  K                   +A L   A  +S+   AE G+                 AD  T E+        P+S  E    +       L+ ++DEEK T+   KV ++  +F+ ++ +NL KGG
Sbjct:   57 HKTFYPVTRSDIVGILCAIIGLMIAAGGGIGGGGMLVPIYVLVLGFEPKFAIPLSNVTVLGGAITNVLMNAAKRHPLADRPLVDWDLLILMEPLTLAGALAGGFINKLAPEIVLTVMLVILLGLTTERTAKKGIKLYKKETEIK-------------------NAHLSKLAAEASASQDAEAGEALL-------------GADDNTEEDEN------PSSEEEKRKTIKIDPE--LKNIIDEEKETAPLWKVQVLLGMFILIVAINLAKGG 287
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig144.3246.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JD73_9PHAE1.660e-11372.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFQ6_ECTSI1.930e-9273.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FV46_ECTSI8.870e-6949.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZGS5_9STRA9.130e-6847.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9YCS1_9STRA1.760e-6264.16Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
A0A7S2FP42_9STRA2.600e-5842.36Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A448YZY0_9STRA6.770e-5743.97Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A6H5JFJ9_9PHAE1.790e-5645.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V1T5B1_HETAK1.940e-5664.29Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3K149_9STRA3.850e-5443.17Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig144contigL-elsbetiae_contig144:33049..38219 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score286.2
Seed ortholog evalue1.8e-74
Seed eggNOG ortholog2880.D8LFQ6
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.Sulfite exporter TauE/SafE
EggNOG OGs28PZK@1,2QWNB@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size903
Cds size903
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig144.3246.1prot_L-elsbetiae_contig144.3246.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig144 33049..38219 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815576.2329838-CDS-L-elsbetiae_contig144:33048..331081622815576.2329838-CDS-L-elsbetiae_contig144:33048..33108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 33049..33108 -
1691682969.2117922-CDS-L-elsbetiae_contig144:33048..331081691682969.2117922-CDS-L-elsbetiae_contig144:33048..33108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 33049..33108 -
1622815576.2459474-CDS-L-elsbetiae_contig144:33635..337191622815576.2459474-CDS-L-elsbetiae_contig144:33635..33719Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 33636..33719 -
1691682969.2288673-CDS-L-elsbetiae_contig144:33635..337191691682969.2288673-CDS-L-elsbetiae_contig144:33635..33719Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 33636..33719 -
1622815576.258916-CDS-L-elsbetiae_contig144:34062..342121622815576.258916-CDS-L-elsbetiae_contig144:34062..34212Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 34063..34212 -
1691682969.240347-CDS-L-elsbetiae_contig144:34062..342121691682969.240347-CDS-L-elsbetiae_contig144:34062..34212Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 34063..34212 -
1622815576.2722397-CDS-L-elsbetiae_contig144:34601..346851622815576.2722397-CDS-L-elsbetiae_contig144:34601..34685Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 34602..34685 -
1691682969.2499921-CDS-L-elsbetiae_contig144:34601..346851691682969.2499921-CDS-L-elsbetiae_contig144:34601..34685Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 34602..34685 -
1622815576.2826695-CDS-L-elsbetiae_contig144:35347..354581622815576.2826695-CDS-L-elsbetiae_contig144:35347..35458Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 35348..35458 -
1691682969.2610705-CDS-L-elsbetiae_contig144:35347..354581691682969.2610705-CDS-L-elsbetiae_contig144:35347..35458Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 35348..35458 -
1622815576.2943363-CDS-L-elsbetiae_contig144:35791..358261622815576.2943363-CDS-L-elsbetiae_contig144:35791..35826Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 35792..35826 -
1691682969.2719939-CDS-L-elsbetiae_contig144:35791..358261691682969.2719939-CDS-L-elsbetiae_contig144:35791..35826Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 35792..35826 -
1622815576.3044622-CDS-L-elsbetiae_contig144:36226..364861622815576.3044622-CDS-L-elsbetiae_contig144:36226..36486Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 36227..36486 -
1691682969.2816465-CDS-L-elsbetiae_contig144:36226..364861691682969.2816465-CDS-L-elsbetiae_contig144:36226..36486Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 36227..36486 -
1622815576.3147388-CDS-L-elsbetiae_contig144:38100..382191622815576.3147388-CDS-L-elsbetiae_contig144:38100..38219Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 38101..38219 -
1691682969.2893956-CDS-L-elsbetiae_contig144:38100..382191691682969.2893956-CDS-L-elsbetiae_contig144:38100..38219Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig144 38101..38219 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig144.3246.1

>prot_L-elsbetiae_contig144.3246.1 ID=prot_L-elsbetiae_contig144.3246.1|Name=mRNA_L-elsbetiae_contig144.3246.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=301bp
MPAEGLLLAVANSDADAVDEFGHEPSFSPGWHKDLLPMNRWDIAAMLLAT
CGLMIAAAGGIGGGGILVPIYILVLRFSPKYAVPLSNITIFGGAITNTFL
NMRKRHPLADRPLVDWDLILVMEPLTIGGALVGSFVQKVLPEIVLTLSMI
LLLLVTADRTLRKGVKAFKKESNSKVSEAADGFKVPISTPDKTDDALLGN
TAKPSSSYGAAEDGKGTFSLAVLAPSCAAAANADLETPEEAAMIPTTAPA
SPAEFSDKLSTHKTDALQRLLDEEKHTSFAKVGIMSAVFVALLTVNLLKG
G
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mRNA from alignment at L-elsbetiae_contig144:33049..38219-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig144.3246.1 ID=mRNA_L-elsbetiae_contig144.3246.1|Name=mRNA_L-elsbetiae_contig144.3246.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5171bp|location=Sequence derived from alignment at L-elsbetiae_contig144:33049..38219- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGGCAGAAGGGCTTTTGCTGGCTGTGGCAAACAGCGACGCGGATGC
AGTCGACGAGTTCGGCCACGAGCCCTCCTTTTCACCCGGTTGGCACAAGG
ACCTCTTGCCCATGAACAGGTACGTACCCAATCCTGCCGTGATCGCTCCT
CTCCAAGATGACACACCCCTTTGAGACTTGATTGTTTTTTACGTTGCATG
CGCGAGGGCGTGTGTTTTCACAGCTCCGCGTAAAACTGCAACTTGTACCT
GTGCTGAGACCGAGCTGTGGACAACAGCAGCAGCAGCAGTGCTTTCGAGA
ACAAAACTCTCCGCAACATCATTCGTAGCGAGCAGTGACCCGAACCTGGG
AGGCCGATTAGTGGGTAAAGACAGAGGAGTGAGAACTGAATCTACATTTG
CTGCCTCGATGTCATGGATCGAAGTGTAATTCGAACAGCCATGCGCCATG
CATGCACACCATTTACATGCATGTTCGATGACCTTGATGCGGACGAACCC
CTCTTTTAGCCCGCCGTCTCATGACGCGAACACTCGTTTCGAACACATAT
TGTAGCGGAATGCAGTCTGACATATTGTGAACGGTTGCCCAGAGAGGAAA
AACATGCCTCCCCCGTCCCTTGTATGTTTACATATTTAGTCTCTGGTCCA
CCCACCCACTGATGATGTGCATCGAGCGGTCTTGAAAGCTACCTCCTATC
TAGATAGATACTTATCTAGACTAAATATCTAGGTATGTATGCAATTGTAT
CTAAATTCTACATATTACTAGATAGACACTTCAAAGTACATGTACATAGT
CTAGTCTTCCAACAGCGTCCTTTTGGGGTTCGAACCGTTCGACAAGAATC
TGTCTGCGGGAGATTAACCGCACCTGACTGCTGCATGCAGTAGTATCTAC
TACACATGGCAACCATACTGTCTTGTTGAGTCTGTTATTAATAACAGGGG
AGGTATCACAAATGCCCAGGATAGAAACAAACCACTTGGTTACAACGCCA
CTGTTTGCACTTTCACAAAAGGTATACGACTGGAATTAGAGACAAAAATG
AAAAAAATAAAAAGCAGCCAATCACTCCCACTGCCGTGTCTCGCAGCGCT
CTCAAGGTGCCTATTTCGGATGAAAGTGGTCAGGAACGGCGGTAGAAATA
TCAAAATGCAAATCGAATCCAGCGGGTTTTCTTGTTCCTTTCATACGTGC
GTGTTTTTTTTTCAATCGCAGCTCGTCGTGAGCCTATGGATAACAGCGGC
GACAGCAGTTCGTATTATCTTCTCTCTCTCTCTCTCTCTCTTCTTGTGGT
CCGGGAAAAATAAACAACATGTCGCTGTGTCTGTGTGTGGTGAGCGTTCT
GTGTTTTTTCGGCAGGTGCGGCAAACTTTTTGTCTGTGTTTTCTCTTAGT
TTTGTACTTGCTCCCGAGAGACCTTTTGGGTCCTTTGCCCTGCAGCTCCT
ACCCTCTCACCTTGTGATTTCCGATGAAATCTAAAACTACCGCCCCAACC
CCCGTCTCTGAAATGCTGTTTCCAAGCAAATCGCAGACGACCAGCGCTGA
ACTAAAAGAGTGTACTTGGTACACACCAAAACTTCAACAAAAGCCAAAAC
GGAACAACCCCGGGCCCCTCGGAGTTACTTGGTTTTGATTTTCGATGGTA
TGTACTTCCTGGAAAACGCCCCTCTATCTTCTCCTCTACCCATCCATTCC
GCGACTAAAACCGCCGCCCCGGTCCTCTTCCAGATGGGACATTGCGGCGA
TGCTGCTGGCCACCTGTGGACTCATGATCGCCGCCGCGGGCGGGATCGGC
GGCGGGGGCATCCTGGTCCCCATCTACATCCTCGTGCTCCGCTTCAGCCC
CAAGTACGCGGTGCCGCTGTCCAACATCACCATCTTCGGAGGGGCCATCA
CGAACACGTTCCTGAACATGAGGAAGAGGCACCCGCTGGCCGACCGCCCA
TTGGTTGACTGGGACCTGATCCTCGTCATGGAACCTCTGACAAGTGAGCT
ACTGTGTTCTATCTGTAGCCCCTTTGATGCACCTATTTGGCTTGAAGGGT
ATGACATTCTCGGAGTAAATGGTTTGGAGCACTTGGGGGCTACGGATCCT
TGCAAAGAAAGGGTATGCGCATTTCCTCGAACAAGTGCGCCATTGTCCAT
CCCCCGCCCCCGTGCCAAGCTCCGGCTCTTGCTCCCCGCTGGGGTACGAC
TTGGCTGCCTAGTGAGCTTCCTAGCATGCACCCACCCCACTTTTCCTTCC
GTTTAGTTGGGAATTCGCACTCTGGTCCTGAGCGTGTTCGCCCCACTGAC
CTCACCCCGTCCTCGCGTCCTCTCCCATATCCCCTTCTCCCATGGCACGT
GATACACAACGCACAACGCACGAAACTCACGCGCCTGCTGCAGTCGGCGG
CGCGCTCGTAGGATCCTTCGTCCAGAAGGTACGATGTGCATACATACTAA
ATGGGACGCATGCATATGTCGCTGCACTTTGTTACTGCGCAGTGGGGCTA
TCTATCCCGTGTGGAGCTGGCCTGGTTTGGTGAAAGCTCGCGTTGACTTC
GTGTATCGATGAGTGCACCGGCGTAGGCATAGGATCTAACGGATACGGTT
GGGTGTATGTATATATGTTTCGTTTTTGTCTCCTTTCGGCAACAGCGCAA
AATACGATATTTTGAGTGCCCACCCACCCTACACGATAGTGTACTAGCGC
GTGCCCCAACGCTTGCCGCGGACCTTCTCTTCGCCTGGCTGCCGCCTCGC
TGCTCATTCAGGTTCTCCCCGAGATCGTCCTGACGCTGAGCATGATCCTG
CTGTTGCTGGTCACCGCCGACCGCACGCTCCGCAAGGGCGTCAAAGCCTT
CAAGAAGGAATCTAACTCCAAGGTGCCTGAGGTGCCTGCATCACTACATA
CTGCGTCACAGCGGGCAGGGTGGCCGTCTTGCTCGTCACCATCACCAACA
CATGCGTGTTAGTGGTTCGGTTTTTCTGGGATTATCATGACTCGCAAACA
ACGTGCCTTGGCTCTTCCTCCCCCCTTGATTTCGACCTCTACATCCTGGA
AAACTAAATGATACTTCGACTTCATTGTTGACGAGGGTGGGGAGTGCTGA
ACCCTGCTCGCGATGAAAGCATAACAGGCAGGCACCGCAGGAGGGGGTCC
ACCCCCCCCCTCCTTTGTGACCCCGCTTCGGTCGTCTAGCTAGCCGTAGT
GGCGTATGGGGGCCAGTGGGGCAGACGACGAATATGCCAATATTGGGAGG
AGAAAAAAAAAGAAAAAAAAAGAAAAAAAACTCGCAACCGAGGGAGAATC
GGGCGACCGTAAAAAAAAACACGGCCCCGTCCGCCTCGCCACACGTCTCG
TTTTCTACAATGGCTCGTCCCCTGTGTTTTGTTTGGTTCGCACTAAGCGC
AGGCCTTGGACACGCCCCCCCCCCCCCCCCCCCACGTCGAATGCCGTGCA
CCTAAAAATTTTTTAAACATACATGCATGTGCTATTGTCACGATGGCGAC
GGCCTCACAAACAACGCGCTGTGCCGATTCTCAGGTTTCCGAAGCCGCGG
ACGGCTTCAAGGTTCCCATCAGCACACCGGACAAGACCGACGACGCTCTG
CTGGGCAACACGGCAAAGGTGTGCGGGGCGACAAGCGACAAGAGCAGCGG
CAGCAGCGGCGGCGACGAACGAACGAAAGGGTCGCGTTTGCTGCGTGCCG
CATGCCTTCCTTCTTTTCTTCCTTCCTCCCGTGCACGCCCCAACGGAGCA
AAATAACAGCAGTGATTTCGCTCAAAGGCCGACCGTTTCCGCACGGTAGA
ACATACTTTACCTTCAAGTTTCAGTTTTCTCTTGTGAGATATGGGTGTCC
ATGCCGTGATGCACAAAGCCGATGGAAAAGTGCCCCCCTCCCCCCTGCCC
CTACCCCACACGCATCTCTCGCTCCCGCCTCCGCCTCTTTCCGTCCGCGC
ACTGCGCCCGAAACTCAAACCCGTGGCGCTCCCGTATTTTCTACCCACCG
TCTGCAGCCCTCGTCGTCCTACGGCGCCGCTGAAGACGGAAAGGGGACGT
TCAGTCTCGCGGTGCTGGCGCCGAGTTGTGCCGCAGCAGCCAATGCGGAC
TTGGAAACCCCCGAAGAGGCCGCGATGATCCCCACGACCGCTCCCGCTTC
TCCGGCGGTAAGGGAGCCGAGTCAGTACCGAGCGGATGCTTGCTCTTCTC
GAGCTTTCTGCCAGTTGTGTTTATGCTACCCGCAGGGACCATTGTACGGT
TGGTTCCACGCCACTCACTCACGTAGATATCTCCTCTACCCATTTCTCTC
TTCTCTTCTCTTCTTGGTGTCGCATGTTTGTGATGAAATACATATTTTTA
TCTTTTCTCACCACAATCCTGCCTCCGCTTTGATCGTACTTTCTTGATAT
GTACGCGAGCCCCATGTCCTTTTAGCGGACACCACCCACGTACCCCCTCA
CACCTCTCCCCCTGTTTCGTCGTCCTTTTTCTTCGTCATCATTTTTCCAG
GAATTTTCTGACAAGTTGTCGACCCACAAGACAGACGCCCTGCAGAGGCT
GCTGGACGAGGAGAAGCACACCTCTTTTGCCAAGGTTAGTCGAGGCAAGG
GCAGTCCCTGCGCCCCATCTATTTCGTCCTTTAATGGTGGGGTACACACC
GATGGTGATGGGTATCTGCTCCCCGATGGCACAAGCACGAGAAAAGGGTG
AACGGGTACCCGCAGTGCGCCATCATTGTCAACGGGAGTACTGCTGTGCC
GTCAGGGGAATCGGCACCGCAATATCAGTTGCACGCACCCATCATACCCG
AGGGATCGCCCTATTTGGATTTCATCTCCGCCGTTTCCTCCATTGAGCTT
GGGCCCAAGCCACCCAGCTTCGGACGCTTTTTCCTATCGGTCACGGTGGT
GTCTTTTATGGTACCGCTTTTTCATAGTAGTCAAGTTCAGCATCGAGTAA
GAACGTCACTTGAATCAAGTGGAATTGGATCAGCTACATAGATTTTTAAC
AAAAGAGTTCACAGCAGTCCAAGGTGCTATGTTTTCGTTTTGTTTCCAGT
GTCCCCGCACACACACACACACACCCGCCCCCGTCGCCGCTTTCCCACTC
ACCGCACGCAGGTCGGCATAATGTCGGCGGTGTTCGTGGCGCTTCTCACC
GTCAACCTCCTCAAGGGGGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig144:33049..38219-

>mRNA_L-elsbetiae_contig144.3246.1 ID=mRNA_L-elsbetiae_contig144.3246.1|Name=mRNA_L-elsbetiae_contig144.3246.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1806bp|location=Sequence derived from alignment at L-elsbetiae_contig144:33049..38219- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCGGCAGAAGGGCTTTTGCTGGCTGTGGCAAACAGCGACGCGGATGC
AGTCGACGAGTTCGGCCACGAGCCCTCCTTTTCACCCGGTTGGCACAAGG
ACCTCTTGCCCATGAACAGATGCCGGCAGAAGGGCTTTTGCTGGCTGTGG
CAAACAGCGACGCGGATGCAGTCGACGAGTTCGGCCACGAGCCCTCCTTT
TCACCCGGTTGGCACAAGGACCTCTTGCCCATGAACAGATGGGACATTGC
GGCGATGCTGCTGGCCACCTGTGGACTCATGATCGCCGCCGCGGGCGGGA
TCGGCGGCGGGGGCATCCTGGTCCCCATCTACATCCTCGTGCTCCGCTTC
AGCCCCAAGTACGCGGTGCCGCTGTCCAACATCACCATCTTCGGAGGGGC
CATCACGAACACGTTCCTGAACATGAGGAAGAGGCACCCGCTGGCCGACC
GCCCATTGGTTGACTGGGACCTGATCCTCGTCATGGAACCTCTGACAAAT
GGGACATTGCGGCGATGCTGCTGGCCACCTGTGGACTCATGATCGCCGCC
GCGGGCGGGATCGGCGGCGGGGGCATCCTGGTCCCCATCTACATCCTCGT
GCTCCGCTTCAGCCCCAAGTACGCGGTGCCGCTGTCCAACATCACCATCT
TCGGAGGGGCCATCACGAACACGTTCCTGAACATGAGGAAGAGGCACCCG
CTGGCCGACCGCCCATTGGTTGACTGGGACCTGATCCTCGTCATGGAACC
TCTGACAATCGGCGGCGCGCTCGTAGGATCCTTCGTCCAGAAGTCGGCGG
CGCGCTCGTAGGATCCTTCGTCCAGAAGGTTCTCCCCGAGATCGTCCTGA
CGCTGAGCATGATCCTGCTGTTGCTGGTCACCGCCGACCGCACGCTCCGC
AAGGGCGTCAAAGCCTTCAAGAAGGAATCTAACTCCAAGGTTCTCCCCGA
GATCGTCCTGACGCTGAGCATGATCCTGCTGTTGCTGGTCACCGCCGACC
GCACGCTCCGCAAGGGCGTCAAAGCCTTCAAGAAGGAATCTAACTCCAAG
GTTTCCGAAGCCGCGGACGGCTTCAAGGTTCCCATCAGCACACCGGACAA
GACCGACGACGCTCTGCTGGGCAACACGGCAAAGGTTTCCGAAGCCGCGG
ACGGCTTCAAGGTTCCCATCAGCACACCGGACAAGACCGACGACGCTCTG
CTGGGCAACACGGCAAAGCCCTCGTCGTCCTACGGCGCCGCTGAAGACGG
AAAGGGGACGTTCAGTCTCGCGGTGCTGGCGCCGAGTTGTGCCGCAGCAG
CCAATGCGGACTTGGAAACCCCCGAAGAGGCCGCGATGATCCCCACGACC
GCTCCCGCTTCTCCGGCGCCCTCGTCGTCCTACGGCGCCGCTGAAGACGG
AAAGGGGACGTTCAGTCTCGCGGTGCTGGCGCCGAGTTGTGCCGCAGCAG
CCAATGCGGACTTGGAAACCCCCGAAGAGGCCGCGATGATCCCCACGACC
GCTCCCGCTTCTCCGGCGGAATTTTCTGACAAGTTGTCGACCCACAAGAC
AGACGCCCTGCAGAGGCTGCTGGACGAGGAGAAGCACACCTCTTTTGCCA
AGGAATTTTCTGACAAGTTGTCGACCCACAAGACAGACGCCCTGCAGAGG
CTGCTGGACGAGGAGAAGCACACCTCTTTTGCCAAGGTCGGCATAATGTC
GGCGGTGTTCGTGGCGCTTCTCACCGTCAACCTCCTCAAGGGGGGCGTCG
GCATAATGTCGGCGGTGTTCGTGGCGCTTCTCACCGTCAACCTCCTCAAG
GGGGGC
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