mRNA_L-elsbetiae_contig1437.3226.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1437.3226.1
Unique NamemRNA_L-elsbetiae_contig1437.3226.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1437.3226.1 vs. uniprot
Match: A0A6H5JSL7_9PHAE (N-acetyltransferase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSL7_9PHAE)

HSP 1 Score: 385 bits (990), Expect = 4.080e-123
Identity = 272/451 (60.31%), Postives = 306/451 (67.85%), Query Frame = 1 
Query:    1 MKGSVALLAGALPSIIWCSHALPPMRDISSARPTCSEG---------LASAVAFIVRPNPFPTASLGASSRSSSRSNVPCTAHPRALAFFVPAFQCAATHRRRRAGA--ISFGSSSVA-----------GVEGAFEAAAAAGLGREPI-DRGVGVDGGVGLPAEAAADSGGDEALGAFGSAIAAAAVDEGELICQRLEGVASREAEVAEQEVLLRVAHLDDYFAIADVRFDVFSPVHSTLKHRFRERSCLLMRERRRRGAFCLVAALGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKAAE--VSHGHVLGTLECSRHEFDGTPLEVQVEEGGAKIASRLYLTEVAVRSDCRRKGVGRVLLGLVDDVAKELQTAEVFLHVNEVNEAALRLYASCGYDDAPDCASNRAFTNSLGLSGGFIGQQHRLLHKTFPNADTNGSGG 1278
            MKGSVALLAGALP++  C        +I+  RPTC+ G          ASAVA+  RP PF        +R+SS  + P  A P +        +C    +RR AGA  + FGSSS+A           G  GA   +AAAG+ REP   RG  V GG G    AA     D A+ AF S+    A+DEGEL C  LEGV SREA +  QE++LRVA LDDYFAIADVRFDVFSPVHSTLKHRFRERSCLLMRERRR+GAFCLVAAL      XXXXXXXXXXXXXXXXXX                  A E  VS GHVLGTLECSRHEFDGTPL V+VEE GAKIA RLYLTEVAVRSDCRR GVGRVLL LVDDVA+ L+T+EVFLHVNE+N+AALRLYA CGY++AP+ ASNRAFTNSLGLSGGFIGQ+H LLHKTFP+AD  GS G
Sbjct:    1 MKGSVALLAGALPALFSCPQ------EITPPRPTCAGGGPDAATAAVAASAVAWASRPTPFAARRRHTGARTSS--SAPRRARPASA-------RC--RQKRRAAGAEPVRFGSSSLAEGPAWASETSSGAGGAGSNSAAAGVDREPAATRGRCVGGG-GNGLSAAGSGSDDAAVDAFVSSAVPTAIDEGELTCGMLEGVVSREAALNGQEMVLRVAKLDDYFAIADVRFDVFSPVHSTLKHRFRERSCLLMRERRRKGAFCLVAALDGPARAXXXXXXXXXXXXXXXXXXEGGGVELGADPTASAAASALETAVSDGHVLGTLECSRHEFDGTPLAVEVEEQGAKIA-RLYLTEVAVRSDCRRMGVGRVLLELVDDVARALKTSEVFLHVNEINQAALRLYARCGYEEAPNGASNRAFTNSLGLSGGFIGQRHLLLHKTFPDAD--GSDG 430
[Close]
BLAST of mRNA_L-elsbetiae_contig1437.3226.1 vs. uniprot
Match: A0A1Z5J8X3_FISSO (N-acetyltransferase domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8X3_FISSO)

HSP 1 Score: 98.2 bits (243), Expect = 1.240e-17
Identity = 80/234 (34.19%), Postives = 107/234 (45.73%), Query Frame = 1 
Query:  565 VLLRVAHLDDYFAIADVRFDVFSPVHSTLKHRFRERSCLLMRERRRRGAFCLVAALGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKAAEVSHGHVLGTLECSRHEFDGTPLEVQVEEGGAKIASRLYLTEVAVRSDCRRKGVGRVLLGLVDDVAKELQTAEVFLHVNEVNEAALRLYASCGYD--DAPDCASNRAFTNSLGLSGGFI-GQQHRLLHKTF-PN 1254
            +L+R+A+  D F IA +R  VFS      + +F ERSC  +  RR RGA CL+AA                                             E     VLG+ ECS HEF GT L  + ++      S LY+TEVAV  D R +G+GR L+  VD  AK      ++LHV+  N AAL LYA  GY+  +  + +    FT SL L  G   G+ H L++K   PN
Sbjct:  327 LLVRIANPSDDFQIAALRLSVFSDFTPEQQGKFCERSCQAISSRRLRGACCLIAA--------------------------------------------HENDTETVLGSAECSYHEFFGTRLGQRRQQ-----FSILYVTEVAVDMDARGQGIGRKLMDAVDVYAKSRNIETIYLHVDVENNAALSLYAKSGYERVNGEEDSMYLEFTTSLHLHPGATKGRDHYLMYKNLIPN 511
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BLAST of mRNA_L-elsbetiae_contig1437.3226.1 vs. uniprot
Match: A0A7S2UTX6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UTX6_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 2.190e-17
Identity = 78/227 (34.36%), Postives = 110/227 (48.46%), Query Frame = 1 
Query:  571 LRVAHLDDYFAIADVRFDVFSPVHSTLKHRFRERSCLLMRERRRRGAFCLVAALGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKAAEVSHGHVLGTLECSRHEFDGTPLEVQVEEGGAKIASRL-YLTEVAVRSDCRRKGVGRVLLGLVDDVAKELQTAEVFLHVNEVNEAALRLYASCGYDDAPDCAS-NRAFTNSLGLSGGFI-GQQHRLLHK 1242
            +RVA   D + IA++R  VFS     ++ +F +RSC  + +RR RGA C+VA+L +S                                    D++  E     ++GT+ECS HEF GT L      G +++  R+ Y+TEVAV    RR GVG  LL  + ++A   Q   ++LHV+  N AA+RLY   GY       S    FT SL L  G   G++H LLHK
Sbjct:  491 VRVATAQDDYTIANLRLSVFSDFSPEVRKQFCQRSCEALAQRRLRGATCIVASLPKSMRGEIISRYVYEDGNPSFSYTPPNS-----------DLENEE----WIMGTVECSVHEFAGTML------GRSRLPERIMYITEVAVSPRARRFGVGTRLLQGIHELAALRQVETLYLHVDVTNRAAIRLYEKAGYTRIKRGNSLYEEFTISLNLHDGATKGRKHYLLHK 696
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BLAST of mRNA_L-elsbetiae_contig1437.3226.1 vs. uniprot
Match: A0A7S0C2W4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C2W4_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.610e-17
Identity = 72/233 (30.90%), Postives = 107/233 (45.92%), Query Frame = 1 
Query:  565 VLLRVAHLDDYFAIADVRFDVFSPVHSTLKHRFRERSCLLMRERRRRGAFCLVAALGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKAAEVSHGH--VLGTLECSRHEFDGTPL-EVQVEEGGAKIASRLYLTEVAVRSDCRRKGVGRVLLGLVDDVAKELQTAEVFLHVNEVNEAALRLYASCGYDDA-PDCASNRAFTNSLGLSGGFI-GQQHRLLHKTF 1248
            + +RVA   D   IA +R  +FS   + ++  F  RSC ++  RR +GA C+VA                                        + ++A+++S     ++GT ECS HEF GT L E ++++      S LY+TEVAV    RR+G+G  L+   D+ AK      ++LHV+  NE A  LY   GY+    D    + FT SL L  G   G+ H L+HK  
Sbjct:  129 ITVRVAKPVDDLCIASLRLSLFSDFSAHMRQAFCSRSCHVLDSRRNQGAACVVAT---------------------------------------IPIRASDISDRTDIIVGTAECSIHEFYGTSLGESRLQD------SILYITEVAVSPTIRRQGIGSKLMKAFDEFAKARGVETIYLHVDVANEKAYSLYEKAGYEKVVSDDFFYKEFTKSLNLHDGATKGRNHYLMHKNM 316
[Close]
BLAST of mRNA_L-elsbetiae_contig1437.3226.1 vs. uniprot
Match: A0A1Z5KAD1_FISSO (N-acetyltransferase domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAD1_FISSO)

HSP 1 Score: 94.7 bits (234), Expect = 1.560e-16
Identity = 76/231 (32.90%), Postives = 105/231 (45.45%), Query Frame = 1 
Query:  565 VLLRVAHLDDYFAIADVRFDVFSPVHSTLKHRFRERSCLLMRERRRRGAFCLVAALGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKAAEVSHGHVLGTLECSRHEFDGTPLEVQVEEGGAKIASRLYLTEVAVRSDCRRKGVGRVLLGLVDDVAKELQTAEVFLHVNEVNEAALRLYASCGYD--DAPDCASNRAFTNSLGLSGGFI-GQQHRLLHKTF 1248
            +L+R+A   D F IA +R  VFS   +  + +F ERSC  +  RR RGA CL+AA                                                   VLG+ ECS HEF GT L  + ++      S LY+TEVAV  D R +G+G+ L+  VD  AK      ++LHV+  N+AAL LYA  GY+  +  + +    FT SL L  G   G+ H L++K  
Sbjct:  323 LLVRIATPTDDFQIAALRLSVFSDFTAEQQGKFCERSCQAISSRRLRGARCLIAAHQNDTET--------------------------------------------VLGSAECSYHEFFGTRLGQRRQQ-----FSILYVTEVAVDIDARGQGIGKKLMDAVDIYAKSRNIETIYLHVDVENKAALSLYAKSGYERVNGEEDSMYLEFTTSLHLHPGATKGRDHYLMYKNL 504
[Close]
BLAST of mRNA_L-elsbetiae_contig1437.3226.1 vs. uniprot
Match: A0A6U0XL64_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XL64_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.610e-16
Identity = 94/224 (41.96%), Postives = 121/224 (54.02%), Query Frame = 1 
Query:  577 VAHLDDYFAIADVRFDVFSPV-HSTLKHRFRERSCLLMRERRRRGAFCLVAALGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKAAEVSHGHVLGTLECSRHEFDGTPLEVQVEEGGAKIASRLYLTEVAVRSDCRRKGVGRVLLGLVDDVAKELQTAEVFLHVNEVNEAALRLYASCGYDDAPDCASNRAFTNSLGL-SGGFIGQQHRLLHK 1242
            VA + ++  +AD+R  VF+P     ++ + R R+   M ERR +GA CLVA    S XXXXXXXXXXXXXXXXXXXXX                   E     ++GTLECS HEFD  PL        +    RLY+TEVAV    RR+GV R LL  VDD A+E     ++LHV+  N+ AL LY   G+ +  +      F  +LGL SG F   +H L+ K
Sbjct:  100 VAGVVEFAEVADLRLSVFTPYPDGPIRQKLRVRAREKMIERRVKGATCLVARPTRSSXXXXXXXXXXXXXXXXXXXXXEE-----------------EAPVPPIIGTLECSTHEFDLAPL--------SGTTRRLYVTEVAVADGYRRRGVARALLRGVDDWAREQGAEAIYLHVDVENDGALGLYHRAGFVELDETVETYNFAAALGLHSGSFSKTRHVLMCK 298
[Close]
BLAST of mRNA_L-elsbetiae_contig1437.3226.1 vs. uniprot
Match: A0A448ZE59_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZE59_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.310e-15
Identity = 77/242 (31.82%), Postives = 108/242 (44.63%), Query Frame = 1 
Query:  574 RVAHLDDYFAIADVRFDVFSPVHSTLKHRFRERSCLLMRERRRRGAFCLVAALGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKAAEVSHGHVLGTLECSRHEFDGTPLEVQVEEGGAKIASRLYLTEVAVRSDCRRKGVGRVLLGLVDDVAKELQTAEVFLHVNEVNEAALRLYASCGYD--DAPDCASNRAFTNSLGLSGGFI-GQQHRLLHK-----TFPNADTNGSG 1275
            RVA   D   IA++R  VFS  +   +  F +RSC L+  RR+RGA C+VA   + X                                    V     +  H++GT E S HEF  T L     +      S LY+TEVAV S+ RRKGV ++++  +D +AK  +   ++LHV+  N+ A+RLY   GY   D+ D      FT  L L  G   G+ H L+ K     T+ N D    G
Sbjct:  166 RVASPMDDLDIANLRLSVFSNFNPESRQLFCDRSCALLNSRRQRGATCIVATSNKKXDEELSMDA----------------------------VGQRRRNSEHIIGTAEISFHEFSXTLLGYSRPKD-----SLLYVTEVAVDSNQRRKGVAKLMMEGIDTLAKIREVETIYLHVDVTNDGAVRLYEKAGYSKMDSSD-PMYLEFTTKLNLHDGATKGRCHYLMSKDIQRPTWLNVDKQQKG 373
[Close]
BLAST of mRNA_L-elsbetiae_contig1437.3226.1 vs. uniprot
Match: A0A1E7F2E0_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F2E0_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 9.700e-13
Identity = 76/239 (31.80%), Postives = 106/239 (44.35%), Query Frame = 1 
Query:  535 SREAEVAEQEVLLRVA-HLDDYFAIADVRFDVFSPVHSTLKHRFRERSCLLMRERRRRGAFCLVAALGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKAAEVSHGHVLGTLECSRHEFDGTPLEVQVEEGGAKIASRLYLTEVAVRSDCRRKGVGRVLLGLVDDVAKELQTAEVFLHVNEVNEAALRLYASCGYDD-APDCASNRAFTNSLGLSGGFI-GQQHRLLHK 1242
            S+  + +    ++R+A H+DD   IA++R  VFS         F +RSC L+  RR+RGA C+VA   E                                     D K  +   G V+GT E S HEF  T L     +      S LY+TEVAV +  RRKG+ +++L  +D+VA       ++LHV+  N  A+ LY + GY   A D      FT  L L  G   G+ H LL K
Sbjct:  294 SKNKKCSSDNTIVRMASHMDDV-DIANLRLSVFSNFTPESLKIFCDRSCQLLSTRRQRGANCIVAKHSE-------------------------------------DKKDGK---GPVIGTAEISFHEFTETGLGYTRPKD-----SILYITEVAVDATHRRKGIAKLMLEAIDNVANIRDVETIYLHVDVTNVGAVHLYETAGYKIVASDNPIFNEFTKKLNLHDGATKGRNHHLLAK 486
[Close]
BLAST of mRNA_L-elsbetiae_contig1437.3226.1 vs. uniprot
Match: A0A7S4APM7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4APM7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 7.680e-12
Identity = 100/240 (41.67%), Postives = 133/240 (55.42%), Query Frame = 1 
Query:  571 LRVAHLDDYFAIADVRFDVFSPVHSTLKHRFRERSCLLMRERRRRGAFCLVAALGESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVK--AAEVSHGHV------------LGTLECSRHEFDGTPLEVQVEEGGAKIASRLYLTEVAVRSDCRRKGVGRVLLGLVDDVAKELQTAEVFLHVNEVNEAALRLYASCGYDDAPDC-ASNRAFTNSLGLSGGFI-GQQHRLLHK 1242
            +RVA   D   IA++R  VFS  +  +   F +RSC L+  RR+RGA C+VA    + XXXXXXXXXXXXXXXXXXXXXXXXXXXX      VDV+  A E+ + ++            +GT E S HEF  T L     +      S LY+TEVAV  + RRKG+ R+++  +D +AK      ++LHV+  N  A+RLY + GY            FT +L L  G   G+ H L+ K
Sbjct:  226 VRVATSVDALDIANLRLSVFSNFNPEMLQVFCDRSCQLLSSRRQRGATCIVATTKSTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ-----VDVRNNAKEIENANINENANKKPEDNIVGTAEISFHEFSRTLLGYSRPKD-----SVLYVTEVAVDLEQRRKGIARLMMEAIDALAKIRDVETIYLHVDVTNSGAVRLYENAGYRKLNSTNPMYLEFTKTLNLHDGATRGRCHYLMAK 455
[Close]
BLAST of mRNA_L-elsbetiae_contig1437.3226.1 vs. uniprot
Match: A0A7S4V447_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V447_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 8.750e-12
Identity = 55/133 (41.35%), Postives = 70/133 (52.63%), Query Frame = 1 
Query:  883 VLGTLECSRHEFDGTPLEVQVEEGGAK--IASRLYLTEVAVRSDCRRKGVGRVLLGLVDDVAKELQTAEVFLHVNEVNEAALRLYASCGY---DDAP-----DCASNRAFTNSLGLSGGFI-GQQHRLLHKTF 1248
            +LG+LECS HEF  T L       G K  I+  LYLTEVAV  + RR G G +LL  VD +A   +   ++LHV+  N+AAL LY   GY   D  P     D      FT  L L  G+I G+ H L+ K +
Sbjct:   97 ILGSLECSSHEFVNTEL-------GRKRPISKVLYLTEVAVSPEARRCGAGTLLLQGVDKLAATRKIESIYLHVDVTNQAALDLYQKSGYQLLDRRPNAYNVDAYMYEEFTYKLNLHDGYIKGRCHYLMVKHY 222
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1437.3226.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5JSL7_9PHAE4.080e-12360.31N-acetyltransferase domain-containing protein n=2 ... [more]
A0A1Z5J8X3_FISSO1.240e-1734.19N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S2UTX6_9STRA2.190e-1734.36Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S0C2W4_9STRA2.610e-1730.90Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A1Z5KAD1_FISSO1.560e-1632.90N-acetyltransferase domain-containing protein n=1 ... [more]
A0A6U0XL64_9STRA2.610e-1641.96Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A448ZE59_9STRA2.310e-1531.82N-acetyltransferase domain-containing protein n=1 ... [more]
A0A1E7F2E0_9STRA9.700e-1331.80N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S4APM7_9STRA7.680e-1241.67Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4V447_9STRA8.750e-1241.35Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1437contigL-elsbetiae_contig1437:10561..16139 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score360.9
Seed ortholog evalue8.1e-97
Seed eggNOG ortholog2880.D7FPW7
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Acetyltransferase (GNAT) family
EggNOG OGs2E9JV@1,2SFXA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-01_008410.1
Exons4
Model size2383
Cds size1287
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1437.3226.1prot_L-elsbetiae_contig1437.3226.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1437 11657..16139 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815574.5460305-UTR-L-elsbetiae_contig1437:10560..116561622815574.5460305-UTR-L-elsbetiae_contig1437:10560..11656Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1437 10561..11656 -
1691682968.2014244-UTR-L-elsbetiae_contig1437:10560..116561691682968.2014244-UTR-L-elsbetiae_contig1437:10560..11656Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1437 10561..11656 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815574.5622904-CDS-L-elsbetiae_contig1437:11656..118601622815574.5622904-CDS-L-elsbetiae_contig1437:11656..11860Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1437 11657..11860 -
1691682968.213716-CDS-L-elsbetiae_contig1437:11656..118601691682968.213716-CDS-L-elsbetiae_contig1437:11656..11860Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1437 11657..11860 -
1622815574.5738618-CDS-L-elsbetiae_contig1437:12417..125291622815574.5738618-CDS-L-elsbetiae_contig1437:12417..12529Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1437 12418..12529 -
1691682968.2230995-CDS-L-elsbetiae_contig1437:12417..125291691682968.2230995-CDS-L-elsbetiae_contig1437:12417..12529Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1437 12418..12529 -
1622815574.5851498-CDS-L-elsbetiae_contig1437:14090..144511622815574.5851498-CDS-L-elsbetiae_contig1437:14090..14451Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1437 14091..14451 -
1691682968.2316134-CDS-L-elsbetiae_contig1437:14090..144511691682968.2316134-CDS-L-elsbetiae_contig1437:14090..14451Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1437 14091..14451 -
1622815574.5967777-CDS-L-elsbetiae_contig1437:15529..161391622815574.5967777-CDS-L-elsbetiae_contig1437:15529..16139Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1437 15530..16139 -
1691682968.240603-CDS-L-elsbetiae_contig1437:15529..161391691682968.240603-CDS-L-elsbetiae_contig1437:15529..16139Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1437 15530..16139 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1437.3226.1

>prot_L-elsbetiae_contig1437.3226.1 ID=prot_L-elsbetiae_contig1437.3226.1|Name=mRNA_L-elsbetiae_contig1437.3226.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=429bp
MKGSVALLAGALPSIIWCSHALPPMRDISSARPTCSEGLASAVAFIVRPN
PFPTASLGASSRSSSRSNVPCTAHPRALAFFVPAFQCAATHRRRRAGAIS
FGSSSVAGVEGAFEAAAAAGLGREPIDRGVGVDGGVGLPAEAAADSGGDE
ALGAFGSAIAAAAVDEGELICQRLEGVASREAEVAEQEVLLRVAHLDDYF
AIADVRFDVFSPVHSTLKHRFRERSCLLMRERRRRGAFCLVAALGESARA
AAAALVAADRGAASERGGGESDGEGGGGGGGGVDVKAAEVSHGHVLGTLE
CSRHEFDGTPLEVQVEEGGAKIASRLYLTEVAVRSDCRRKGVGRVLLGLV
DDVAKELQTAEVFLHVNEVNEAALRLYASCGYDDAPDCASNRAFTNSLGL
SGGFIGQQHRLLHKTFPNADTNGSGGKQ*
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mRNA from alignment at L-elsbetiae_contig1437:10561..16139-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1437.3226.1 ID=mRNA_L-elsbetiae_contig1437.3226.1|Name=mRNA_L-elsbetiae_contig1437.3226.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5579bp|location=Sequence derived from alignment at L-elsbetiae_contig1437:10561..16139- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGGGCTCTGTGGCCCTCCTCGCCGGTGCTCTGCCTTCCATCATTTG
GTGCTCACATGCTCTACCGCCGATGCGAGATATAAGTTCTGCGAGGCCAA
CTTGTAGCGAAGGCCTCGCGTCAGCGGTAGCGTTTATCGTCAGACCAAAC
CCTTTTCCCACCGCCAGCCTTGGTGCATCTAGCCGATCAAGCAGCCGAAG
CAATGTGCCATGCACTGCGCATCCTCGAGCACTAGCTTTTTTCGTGCCGG
CATTCCAGTGTGCAGCAACGCACAGACGCCGTCGGGCGGGCGCTATCAGC
TTCGGGAGCAGCAGCGTCGCCGGCGTGGAGGGGGCTTTCGAGGCAGCAGC
AGCAGCTGGCCTGGGTCGAGAACCGATAGATCGAGGGGTTGGTGTTGATG
GTGGTGTTGGTTTGCCCGCTGAAGCTGCCGCTGATAGCGGTGGTGATGAA
GCTTTGGGCGCGTTTGGCTCGGCTATTGCTGCTGCCGCCGTCGACGAGGG
AGAGTTGATTTGCCAAAGGCTTGAAGGCGTCGCGTCCCGAGAGGCCGAAG
TGGCCGAGCAGGAGGTCCTTCTCAGGGTGGCGCATCTGGACGATTATTTT
GCGATCGCGGGTGAGTATATACGAAAGTTCCATAGGCCGCTTCCTTGGTC
TTGGGAGTTGATTTGTCGGCAGCTTGAAGAGGTTGTCTCTCAAGAGGCGG
AGGTCGCGGAGGAGCAGATCCTTCTCCGGATGGCCAATCTGGACGATTTC
TTTGCCATCTCGTGTGAGTATATGCCGGTACTCCGCGAGGTAGCGTAGCG
CACAGCCCAGTCGATGGGACGATGTGATAGCATCGAAATCGATTCCCCTT
GAAGTACGGCGGGTGTATCTGGGTCGGCTGCTTCAAGATCTCAAACTACT
GCTTCCAGATCTCGAACTACTGCTGTCTGTCAAACGTCGGGAAAGGGGTG
CGTGTGAATAGCTGGAAAAGTCTCGTCGGCGAGAGACAAATCCGATGGGA
CACTCGGTCGGTAGTGAGATCACTCGTTGAACGTTCTCGTTGAACATTCG
AGCTTTCAATTGCCCCCCCGGCTGCTCGTTAGACTACGTCAGATTACGGT
TTGCAAACATTTCGGCGTCAACATGGGCCAAGAACAGCAGTTCTTAACAA
TACATGTTTGGGGGCGAAATTTGGGTTGAGAGTCTGCAGTGTCGCAGTCC
AAAACCAAGTGCGTTACGAGTAGAAAAACCTTCTCCCTAGAACTTTGACG
CCCAAGGAACGCGTCGACCACTGGCGCAACACGAAAATACGAGATAATAG
ATGCTGACGGCAATACCTGCGATACATCGATGATTTTAACAAGTTCCGCT
TAAACGTGCACGGTGGTTGAAGACCCGTCATCCTGTGGGAGCCTTTGAGG
CAAAGGTGGCCGGCAGAAGCACGGACCTTGGTTTTCTGTCGAAGAGAAAC
GGCGGTGTGGAAGACATCGCCTCGTCGTGCGCAGCAATCTCCTACTCCCT
ATCGACCCGCTGACGTTACTTCTTCCTCTCGCACTTTGCTTACCTTTCGT
CGTGTTCGAGCTTATTACCTGTCGGACGTCAATCTCGCACGCTTATTTTG
TTGCCATGAGCATGTATATTGTACCTGTACATCATTGTCCTGATGTCCGC
TCCGACTTGGCCGCGCCCCCCCCCCACTGGTCATCCAGACGTGAGATTCG
ACGTGTTCTCACCGGTGCATTCGACCCTTAAGCACCGCTTCCGAGAGAGG
AGCTGTTTGCTCATGAGGGAAAGACGGCGAAGGGGGGCCTTTTGCCTGGT
GGCCGCTCTCGGCGAATCAGCAAGAGCCGCAGCCGCGGCATTGGTGGCAG
CCGATAGGGGTGCCGCTAGTGAGAGGGGGGGGGGTGAATCTGACGGAGAA
GGAGGAGGAGGAGGAGGAGGAGGGGTGGATGTTAAGGCGGCGGAGGTGTC
GCACGGGCACGTCCTGGGGACTTTGGAATGCTCCAGGCACGAGTTCGACG
GCACCCCGCTAGAGGTTCAAGTGGAGGAAGGCGGGGCAAAAATTGCCAGG
TGGGATGGCATGTATGTCAGGCCGGTCGGGCTTCCTTGGCACCGTACCGT
AGCTCCTCGTACCCTTCGGCTGCGGGTACACAGCTTACCGTAGGTGACAT
AAGATACCACACCCCCGGTGCCGACTTTTAGAGCTCCATTACTCCGTAAC
AAAGAGTGTGCCAGCACCAAACGACTCATTTTTGGACAGCCCTCGACTAG
ATCTTTCCAACGCCGCCCCCTTTCGGCATGATGCTCTTCTTGCCGGGGAG
GAATCGACCTTTGAAAATCTGTCCAGGGGGTGTGGTATCTTGTGTCACCT
ACGGTACTGTAAACCCGGCTGATTTGGTGCTCCCAACTATTGTAGCCCGC
ACGCCATATAAACTGCACATTATAGCCCGGCACGACTCGAAAAGCCCGAC
AACGGGCAAGATGTTTTGCCCATTTACACGAGGCCGTTATTGTAGAAGAA
ACCAAAACACCACACCAGGTATATACGTCCCCTGACGCTGGTTGTTGAGG
GGGGACGTGGATGTTGAATGCTGCCTCCTTCCTTCCCAACCAGTGATATG
TGTGTGAAATATTTTTCAAGGAGGCACACAAATTAGCTCCTTCTTATCCA
GTGCTCGCCGCTGAGTCCGGGATTTTTGATGTGGAAAGTGTAGTCCTGCA
GCTCTGGTACCCCTCGAGGGTTCAGAAGAGAGAAAGAAGCGAATCGATGC
TCCAGTCGCGGAGTACAGACGATTTAGGGTGACCCAAAACTACGCCTGTC
TGGGCTTCGCAAACAGTACGCGCATATACTAGGTATACCGCCCCCCCAAA
AAAAGCCCCCGCTCTCTTGAGGCACGTTCACACGAGTGCGCCAGCCCTAG
GAGGTCACATTCTTCATCCCAGACGAAACAAACCACAGGCCACAGGGTAT
GCGACCTACCGCTCATACATAAGCTAGGCGCGGGCGTGAGACCCTGAATG
GCTCCGCGAGCGTCAAATCAGAGCTGCCTTCGAACACACTTTGAGGGGCT
CGGCCAGACCAGCACAAGCGAAGCAGCAGGTACCCTGCAACTAGTGAGCT
ACCATCAGGGGGCGCTTTGTACACCTGAGACTTACTCTTGCCGATGTGCG
TAGTCTCCTCGTGGGTGAATCACCTCTGGTTTTGAGCCAAAATCGCCCCG
ACATGGTGCGTGTTGTGTGTGCAAACTGTCTCTCTCTTCTTTCTTTCTTC
CACTCAAAGCTCCCGTAGCGCACTTGACATGCCGAGAGTTAGTGCCCTGC
AAATACTGACGCCTAAACTTTTGGTCTTTCGCCGAAGTATCTTTTCTACG
CATGCTCTCACTCCTGGCCTGGAGCAACTCCTCTTCGCAGAGCGTTCGAC
CTCTCCGTGTATACCAATACTGAGGCCCTTTGAATTGGCCGCACCAGAAA
TGTGCCTCCTTAAAGTTACACCGGCGTTTTATGTTCCTCCTCAAAAACGA
TTTCGCATATGTAGTATCACTGCAACCCTCGAAGATGCGTGTGAAACCCT
CACCCCCCCCTCCCCCCCCACACACACACAATTATATCTCCCGCAACGAC
ATCGAATAAGCAGGTTGTACCTCACAGAGGTAGCTGTCCGTTCGGACTGC
CGGAGAAAGGGGGTGGGGCGTGTTTTACTGGGGTTGGTGGACGACGTCGC
GAAGGAGCTCCAGACGGCCGAGGTGGGCGTGTTTCGGGTTGGGGGTGGGT
GGGATAGGGTGAGACCTCGCCCTTGACCTTGTTGCTGTTTTTCCTCCGCA
TTCGATTGGCTTCGTCGACCGTCGCCAGAGGCGAGGGTGGGCGGCAGCGT
AGTACTCTCTCGGCTAAAGTTGTTGTTTTGATGAAACTTTTTTTCTGCTT
TTCTTGTGCAAAGAAAAGTGAGATCTCCTTGTGTCGGTGCTCCTCCACGC
GAGTCCGCGCTTTTACTCTAGTGGGCCATTGTGGTCTGGCTGGTGCTTTC
CTTCTCGTTCTTTCGCTGTTAACGTGTTGTTTCCCTGCTGGATGTTCACA
CTGGCAGATCGAGGCCCATCTCGTAGTAATTGTTTTTTTCCCGGCCTTTG
TTCCTCGATGCCCGGCATATACAAGTAGGTAGTTTTCGGCGGTACCCCGG
GACTCACTTCCTTAAAACCTCGTGTCACAAGTGCCCCCTCCACCCACCCG
TCCCCCCGTCCCCCCGTCCCCCCCCCATGCTGTTGCCATCTCATACGTAC
GAAAAACACCAAAACTTGAACTGCAAAAGGTGTTCCTGCACGTGAACGAG
GTCAACGAGGCGGCCTTGCGTCTCTACGCGAGCTGCGGCTATGACGATGC
GCCGGACTGCGCCTCTAACCGGGCCTTCACCAACAGTCTCGGCCTGTCGG
GCGGTTTCATCGGACAGCAACATCGACTCTTGCACAAGACCTTTCCGAAT
GCCGATACAAACGGCAGCGGCGGCAAGCAGTAGCGGTGCCGGTAGCACGA
GCGTGTTGCCCGTTCGCTTCCCTCTATACACTCGCTGTTTTCTTGGAAAA
AAACTGCCACGTTTACCTACATACACCATCGTGCTCTTTGCCAGTTGGGC
GGAGCTTTAGAATATGTTACTCCGGTGTGCCAGGCATTCGTTTTTTGTGT
TCCCAACGTACTGCCTGGGTGTATTTGAATGGAAGAGTGCACGGGCGTCT
GTTTGGCTTTCTGGCATTTTTTTTTAGCCTCTCACAGAAAGCTGGGTTCT
TTTGAAAGCGTGCTCCTTTTGTTGTTTGTTTGTTTGTACCTTTTTTGGGT
CTTATGGGGGGCGGCGTGTTCCAGCTCTCATCCAAAGGGCTTGACTCTCG
GTGGCATAGGTCGTGGAAACGGAGCTCGAATTCTTCCTCTTGCGCTTTTG
CCTGCTCACCTGCTGATGTTGACGCCGCCGCCGCCACGATGGTGTGTTGC
CGCTTTTGCGCCGCGAGGCTTCAAACGCTCCTGGGCCTCGATCAGCTGCA
GTGGTTGACACGTATATTTAGGGGGCGCTTTTTGTCCTTTTTCCCATGTT
TTATAATAAATAGAGCGCTTGCAGATCTCGCGGGGAATACCCAAATACCC
GGAGGGCGTGATTGATGGGCATGGCTCAGTTGAGCTATATGCGTGGCAGT
GTTGCATCACAATAGACGGGTGTTGTGGCTGCACGGCAGCGAGCGTTGGC
ACGCTCGGCGTTTGGCAACACACGGTCGATCTGGGTCTGATCAGCTAGAT
AGGTAGTCTCTCGGTGATGGCTAAAAACGAGGGGCTGTTGGGTTAGCAGA
AGTGGTGCGCGGTGTGGGGCCCTTTATCTTTTGTAAATATGGAAATCGTG
AAACTGTTCTCCGTAAAATTATTTTGTGGCGTATCTTGGTGGTGTGCCCG
GCTCTGTGACATATCCGCAGAGCAAGGCAGTGAGTAGCACCGGCCTCCCT
AGTGTCGTGTGCAGTATGCTTTGTACAACCAAAAACTTTTGACAATTTTT
TTGTGTGTTTTGTCTAGATCCCACCTTTTTTGCACACCTGCGATAAAAAA
ACGCATAAAAAATCGACGCGACGGATGGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1437:10561..16139-

>mRNA_L-elsbetiae_contig1437.3226.1 ID=mRNA_L-elsbetiae_contig1437.3226.1|Name=mRNA_L-elsbetiae_contig1437.3226.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2574bp|location=Sequence derived from alignment at L-elsbetiae_contig1437:10561..16139- (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGGGCTCTGTGGCCCTCCTCGCCGGTGCTCTGCCTTCCATCATTTG
GTGCTCACATGCTCTACCGCCGATGCGAGATATAAGTTCTGCGAGGCCAA
CTTGTAGCGAAGGCCTCGCGTCAGCGGTAGCGTTTATCGTCAGACCAAAC
CCTTTTCCCACCGCCAGCCTTGGTGCATCTAGCCGATCAAGCAGCCGAAG
CAATGTGCCATGCACTGCGCATCCTCGAGCACTAGCTTTTTTCGTGCCGG
CATTCCAGTGTGCAGCAACGCACAGACGCCGTCGGGCGGGCGCTATCAGC
TTCGGGAGCAGCAGCGTCGCCGGCGTGGAGGGGGCTTTCGAGGCAGCAGC
AGCAGCTGGCCTGGGTCGAGAACCGATAGATCGAGGGGTTGGTGTTGATG
GTGGTGTTGGTTTGCCCGCTGAAGCTGCCGCTGATAGCGGTGGTGATGAA
GCTTTGGGCGCGTTTGGCTCGGCTATTGCTGCTGCCGCCGTCGACGAGGG
AGAGTTGATTTGCCAAAGGCTTGAAGGCGTCGCGTCCCGAGAGGCCGAAG
TGGCCGAGCAGGAGGTCCTTCTCAGGGTGGCGCATCTGGACGATTATTTT
GCGATCGCGGATGAAGGGCTCTGTGGCCCTCCTCGCCGGTGCTCTGCCTT
CCATCATTTGGTGCTCACATGCTCTACCGCCGATGCGAGATATAAGTTCT
GCGAGGCCAACTTGTAGCGAAGGCCTCGCGTCAGCGGTAGCGTTTATCGT
CAGACCAAACCCTTTTCCCACCGCCAGCCTTGGTGCATCTAGCCGATCAA
GCAGCCGAAGCAATGTGCCATGCACTGCGCATCCTCGAGCACTAGCTTTT
TTCGTGCCGGCATTCCAGTGTGCAGCAACGCACAGACGCCGTCGGGCGGG
CGCTATCAGCTTCGGGAGCAGCAGCGTCGCCGGCGTGGAGGGGGCTTTCG
AGGCAGCAGCAGCAGCTGGCCTGGGTCGAGAACCGATAGATCGAGGGGTT
GGTGTTGATGGTGGTGTTGGTTTGCCCGCTGAAGCTGCCGCTGATAGCGG
TGGTGATGAAGCTTTGGGCGCGTTTGGCTCGGCTATTGCTGCTGCCGCCG
TCGACGAGGGAGAGTTGATTTGCCAAAGGCTTGAAGGCGTCGCGTCCCGA
GAGGCCGAAGTGGCCGAGCAGGAGGTCCTTCTCAGGGTGGCGCATCTGGA
CGATTATTTTGCGATCGCGGACGTGAGATTCGACGTGTTCTCACCGGTGC
ATTCGACCCTTAAGCACCGCTTCCGAGAGAGGAGCTGTTTGCTCATGAGG
GAAAGACGGCGAAGGGGGGCCTTTTGCCTGGTGGCCGCTCTCGGCGAATC
AGCAAGAGCCGCAGCCGCGGCATTGGTGGCAGCCGATAGGGGTGCCGCTA
GTGAGAGGGGGGGGGGTGAATCTGACGGAGAAGGAGGAGGAGGAGGAGGA
GGAGGGGTGGATGTTAAGGCGGCGGAGGTGTCGCACGGGCACGTCCTGGG
GACTTTGGAATGCTCCAGGCACGAGTTCGACGGCACCCCGCTAGAGGTTC
AAGTGGAGGAAGGCGGGGCAAAAATTGCCAGACGTGAGATTCGACGTGTT
CTCACCGGTGCATTCGACCCTTAAGCACCGCTTCCGAGAGAGGAGCTGTT
TGCTCATGAGGGAAAGACGGCGAAGGGGGGCCTTTTGCCTGGTGGCCGCT
CTCGGCGAATCAGCAAGAGCCGCAGCCGCGGCATTGGTGGCAGCCGATAG
GGGTGCCGCTAGTGAGAGGGGGGGGGGTGAATCTGACGGAGAAGGAGGAG
GAGGAGGAGGAGGAGGGGTGGATGTTAAGGCGGCGGAGGTGTCGCACGGG
CACGTCCTGGGGACTTTGGAATGCTCCAGGCACGAGTTCGACGGCACCCC
GCTAGAGGTTCAAGTGGAGGAAGGCGGGGCAAAAATTGCCAGCAGGTTGT
ACCTCACAGAGGTAGCTGTCCGTTCGGACTGCCGGAGAAAGGGGGTGGGG
CGTGTTTTACTGGGGTTGGTGGACGACGTCGCGAAGGAGCTCCAGACGGC
CGAGCAGGTTGTACCTCACAGAGGTAGCTGTCCGTTCGGACTGCCGGAGA
AAGGGGGTGGGGCGTGTTTTACTGGGGTTGGTGGACGACGTCGCGAAGGA
GCTCCAGACGGCCGAGGTGTTCCTGCACGTGAACGAGGTCAACGAGGCGG
CCTTGCGTCTCTACGCGAGCTGCGGCTATGACGATGCGCCGGACTGCGCC
TCTAACCGGGCCTTCACCAACAGTCTCGGCCTGTCGGGCGGTTTCATCGG
ACAGCAACATCGACTCTTGCACAAGACCTTTCCGAATGCCGATACAAACG
GCAGCGGCGGCAAGCAGTAGGTGTTCCTGCACGTGAACGAGGTCAACGAG
GCGGCCTTGCGTCTCTACGCGAGCTGCGGCTATGACGATGCGCCGGACTG
CGCCTCTAACCGGGCCTTCACCAACAGTCTCGGCCTGTCGGGCGGTTTCA
TCGGACAGCAACATCGACTCTTGCACAAGACCTTTCCGAATGCCGATACA
AACGGCAGCGGCGGCAAGCAGTAG
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