mRNA_L-elsbetiae_contig14330.3200.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14330.3200.1 vs. uniprot
Match: A0A6H5K7G6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7G6_9PHAE) HSP 1 Score: 176 bits (447), Expect = 1.200e-51 Identity = 85/130 (65.38%), Postives = 101/130 (77.69%), Query Frame = 1 Query: 172 PSLGIVENALLTTAKSDFGGHPKAFEAAAAWSGERLRASRDHQEHPPRAPHLCCADYEHGREAYSLLQDLLSPEAVRPVVHSEEHGACYLGTASHADAAAIRENHGQFRLESFAPFPSALKIAPDLLEHG 561 PSL +VEN L TTAK DF GH +AFEAAA W+GERLR S+D RAPHLCCA+Y HGRE +S L+ LSP+AVR V HSE+HGAC+L TASHA A+AI E+ QF LESF+PFPSALK+AP L++H Sbjct: 20 PSLELVENGLATTAKDDFNGHARAFEAAATWNGERLRRSQD----GTRAPHLCCAEYGHGRETFSRLKQFLSPDAVRVVSHSEDHGACFLATASHAQASAIMEDQEQFGLESFSPFPSALKLAPGLVDHS 145
BLAST of mRNA_L-elsbetiae_contig14330.3200.1 vs. uniprot
Match: A0A6H5K229_9PHAE (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K229_9PHAE) HSP 1 Score: 176 bits (447), Expect = 7.850e-48 Identity = 85/130 (65.38%), Postives = 101/130 (77.69%), Query Frame = 1 Query: 172 PSLGIVENALLTTAKSDFGGHPKAFEAAAAWSGERLRASRDHQEHPPRAPHLCCADYEHGREAYSLLQDLLSPEAVRPVVHSEEHGACYLGTASHADAAAIRENHGQFRLESFAPFPSALKIAPDLLEHG 561 PSL +VEN L TTAK DF GH +AFEAAA W+GERLR S+D RAPHLCCA+Y HGRE +S L+ LSP+AVR V HSE+HGAC+L TASHA A+AI E+ QF LESF+PFPSALK+AP L++H Sbjct: 32 PSLELVENGLATTAKDDFNGHARAFEAAATWNGERLRRSQD----GTRAPHLCCAEYGHGRETFSRLKQFLSPDAVRVVSHSEDHGACFLATASHAQASAIMEDQEQFGLESFSPFPSALKLAPGLVDHS 157
BLAST of mRNA_L-elsbetiae_contig14330.3200.1 vs. uniprot
Match: A0A6H5JQT4_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT4_9PHAE) HSP 1 Score: 172 bits (436), Expect = 2.540e-46 Identity = 84/132 (63.64%), Postives = 101/132 (76.52%), Query Frame = 1 Query: 166 PCPSLGIVENALLTTAKSDFGGHPKAFEAAAAWSGERLRASRDHQEHPPRAPHLCCADYEHGREAYSLLQDLLSPEAVRPVVHSEEHGACYLGTASHADAAAIRENHGQFRLESFAPFPSALKIAPDLLEHG 561 P PSL +VENAL TTAK DF GH +AFEAAA W+GERLR H++ RAPHLCCA+Y HGRE +S L+ LSPEAVR V HSE+ GAC+ +ASHA A+AI E+ QF LESF+PFPSALK+AP L++H Sbjct: 20 PYPSLELVENALSTTAKDDFNGHARAFEAAATWNGERLR----HRQDETRAPHLCCAEYGHGRETFSRLKQFLSPEAVRVVSHSEDLGACFFASASHAQASAIIEDQEQFGLESFSPFPSALKLAPGLVDHS 147
BLAST of mRNA_L-elsbetiae_contig14330.3200.1 vs. uniprot
Match: A0A6H5LIN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIN3_9PHAE) HSP 1 Score: 161 bits (407), Expect = 1.060e-45 Identity = 81/130 (62.31%), Postives = 97/130 (74.62%), Query Frame = 1 Query: 172 PSLGIVENALLTTAKSDFGGHPKAFEAAAAWSGERLRASRDHQEHPPRAPHLCCADYEHGREAYSLLQDLLSPEAVRPVVHSEEHGACYLGTASHADAAAIRENHGQFRLESFAPFPSALKIAPDLLEHG 561 P+L +VENALLTTAK DF GH AFEAAA WSGERLR S+D RAPHL CA Y +G EA S L+ LSP+AV+ V HSE+HGAC+ +ASHA AAAI E+ QF LE+F+PFPS LK+AP L++H Sbjct: 27 PALDLVENALLTTAKDDFDGHAGAFEAAATWSGERLRHSQDEA----RAPHLACARYGNGHEASSRLKQFLSPDAVQVVSHSEDHGACFFASASHAQAAAIVEDQEQFGLENFSPFPSPLKLAPGLVDHS 152
BLAST of mRNA_L-elsbetiae_contig14330.3200.1 vs. uniprot
Match: D8LNG6_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG6_ECTSI) HSP 1 Score: 161 bits (407), Expect = 1.950e-42 Identity = 89/153 (58.17%), Postives = 105/153 (68.63%), Query Frame = 1 Query: 100 LLLVASASIAAAGASNSSTSGAPCPSLGIVENALLTTAKSDFGGHPKAFEAAAAWSGERLRASRDHQEHPPRAPHLCCADYEHGREAYSLLQDLLSPEAVRPVVHSEEHGACYLGTASHADAAAIRENHGQFRLESFAPFPSALKIAPDLLEH 558 LL+ +S AAG NS P+L +VENALLTTAK DF GH AFEAAA W+GERLR H + RAPHL CA Y G EA S L+ LSPEAVR V HSE+HGAC+ +ASHA AAAI E+ QF LE+F+PFPS LK+AP L++H Sbjct: 10 LLVFLCSSAVAAGRLNS-------PALELVENALLTTAKDDFKGHVGAFEAAATWNGERLR----HSQEETRAPHLACARYGDGHEASSRLKQFLSPEAVRVVSHSEDHGACFFASASHAQAAAIVEDQEQFGLENFSPFPSPLKLAPGLVDH 151
BLAST of mRNA_L-elsbetiae_contig14330.3200.1 vs. uniprot
Match: A0A2I6U1S5_SACJA (Subtilisin n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1S5_SACJA) HSP 1 Score: 148 bits (373), Expect = 7.290e-38 Identity = 75/137 (54.74%), Postives = 93/137 (67.88%), Query Frame = 1 Query: 151 STSGAPCPSLGIVENALLTTAKSDFGGHPKAFEAAAAWSGERLRASRDHQEHPPRAPHLCCADYEHGREAYSLLQDLLSPEAVRPVVHSEEHGACYLGTASHADAAAIRENHGQFRLESFAPFPSALKIAPDLLEHG 561 S + P PSLG+VE +LLTTA F GH K FE AA W+G+ +R+ +E RAPHL C +Y G E S LQ+LLSPEAVR V HS HGAC+ TASHA+A A+ +N + L S +PFPSALK+AP +LEHG Sbjct: 25 SANSLPYPSLGVVEGSLLTTAHESFDGHAKGFETAAQWTGDIIRSK---EEDNARAPHLVCTEYNRGGETLSRLQELLSPEAVRSVAHSSTHGACFFVTASHAEARAMSDNP-YYGLTSISPFPSALKVAPGVLEHG 157
BLAST of mRNA_L-elsbetiae_contig14330.3200.1 vs. uniprot
Match: A0A2I6U1R2_SACJA (Subtilisin (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1R2_SACJA) HSP 1 Score: 144 bits (364), Expect = 1.150e-36 Identity = 73/132 (55.30%), Postives = 91/132 (68.94%), Query Frame = 1 Query: 166 PCPSLGIVENALLTTAKSDFGGHPKAFEAAAAWSGERLRASRDHQEHPPRAPHLCCADYEHGREAYSLLQDLLSPEAVRPVVHSEEHGACYLGTASHADAAAIRENHGQFRLESFAPFPSALKIAPDLLEHG 561 P PSL +VE +LLTTA+ F GH KAFE AA W+GE LR+ +E RAPHL C +Y G + LQ+LLSP AVRPV HS HGAC+ TASHA+A A+ ++ + L S +PFPSALK+AP +LEHG Sbjct: 30 PYPSLSVVEGSLLTTAQDSFDGHAKAFETAAQWTGEILRSK---EEDNARAPHLVCTEYNRGGKTLPRLQELLSPGAVRPVAHSSTHGACFFVTASHAEARAMSDSP-YYGLTSISPFPSALKVAPGVLEHG 157
BLAST of mRNA_L-elsbetiae_contig14330.3200.1 vs. uniprot
Match: A0A6H5LLC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLC6_9PHAE) HSP 1 Score: 93.2 bits (230), Expect = 1.760e-19 Identity = 62/140 (44.29%), Postives = 77/140 (55.00%), Query Frame = 1 Query: 148 SSTSGAP-CPSLGIVENALLTTAKSDFGGHPKAFEAAAAW-SGERLRASRDHQEHPPRAPHLCCADYEHGREAYSLLQDLLSPEAVRPVVHSEEHGACYLGTASHADAAAIRENHGQFRLESFAPFPSALKIAPDLLEHG 561 S+ SGA PSLG E LLTTA DF AF A+AW +G+R S AP+L C + GR AY L+ L AVRPV + HGAC++ TAS A+A + L +F FP+ALKIAP LL+HG Sbjct: 21 STASGASQVPSLGFFEQTLLTTAGLDFDSEA-AFAFASAWQAGDRQGRS---------APYLSCVKHGEGRHAYRKLEGFLGARAVRPVSSTATHGACFMVTASPAEATQLSSWED---LTTFGAFPAALKIAPGLLDHG 147
BLAST of mRNA_L-elsbetiae_contig14330.3200.1 vs. uniprot
Match: D8LQI1_ECTSI (Subtilisin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI1_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 1.110e-18 Identity = 60/140 (42.86%), Postives = 79/140 (56.43%), Query Frame = 1 Query: 148 SSTSGAP-CPSLGIVENALLTTAKSDFGGHPKAFEAAAAW-SGERLRASRDHQEHPPRAPHLCCADYEHGREAYSLLQDLLSPEAVRPVVHSEEHGACYLGTASHADAAAIRENHGQFRLESFAPFPSALKIAPDLLEHG 561 S+ SGA PSLG E LLTTA +DF AF A+AW +G+R S +P+L C ++ GR AY L+ L AV+PV + HGAC++ TAS A+AA + +F FP+ALKIAP LL+HG Sbjct: 16 STVSGASQVPSLGFFEQTLLTTAGADFDSEA-AFAFASAWQAGDRQGRS---------SPYLSCVEHGEGRHAYRKLEGFLGARAVKPVSSTATHGACFMVTASPAEAAQLSSWED---FTTFGAFPAALKIAPGLLDHG 142
BLAST of mRNA_L-elsbetiae_contig14330.3200.1 vs. uniprot
Match: A0A6H5JKA8_9PHAE (Subtilisin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKA8_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 4.560e-13 Identity = 58/148 (39.19%), Postives = 76/148 (51.35%), Query Frame = 1 Query: 124 IAAAGASNSSTSGAPCPSLGIVENALLTTAKSDFGGHPKAFEAAAAWSGERLRASRDHQEHPPRAPHLCCADYEHGREAY-SLLQDLLSPEAV--RPVVHSEEHGACYLGTASHADAAAIRENHGQFRLESFAPFPSALKIAPDLLEH 558 +A AG S+ P P L ++ ALLTTA F H F+AA W RL +R AP+L CA + R + L +L A+ R VV S EHG C + TA+ A +I + GQ S+A FPSALK+AP LL+H Sbjct: 14 LAFAGGGASAAPTLPHPPLSVIRGALLTTAGVTFR-HQGEFKAAVEWHEARLDDARP-------APYLACASPDSDRGGSGATLSHVLGAGAIGGRVVVSSAEHGVCVVATATPGQAESIFQ--GQQVFSSWAAFPSALKLAPGLLDH 151 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14330.3200.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14330.3200.1 >prot_L-elsbetiae_contig14330.3200.1 ID=prot_L-elsbetiae_contig14330.3200.1|Name=mRNA_L-elsbetiae_contig14330.3200.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=187bp RESCGERASPTRNRRTGVRFGNRCEMVLRLTRGLLLVASASIAAAGASNSback to top mRNA from alignment at L-elsbetiae_contig14330:4054..4615+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14330.3200.1 ID=mRNA_L-elsbetiae_contig14330.3200.1|Name=mRNA_L-elsbetiae_contig14330.3200.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=562bp|location=Sequence derived from alignment at L-elsbetiae_contig14330:4054..4615+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14330:4054..4615+ >mRNA_L-elsbetiae_contig14330.3200.1 ID=mRNA_L-elsbetiae_contig14330.3200.1|Name=mRNA_L-elsbetiae_contig14330.3200.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1122bp|location=Sequence derived from alignment at L-elsbetiae_contig14330:4054..4615+ (Laminarionema elsbetiae ELsaHSoW15)back to top |