mRNA_L-elsbetiae_contig14329.3198.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14329.3198.1
Unique NamemRNA_L-elsbetiae_contig14329.3198.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig14329.3198.1 vs. uniprot
Match: D8LPM1_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM1_ECTSI)

HSP 1 Score: 1602 bits (4147), Expect = 0.000e+0
Identity = 976/1274 (76.61%), Postives = 1043/1274 (81.87%), Query Frame = 1 
Query:    1 ETGQLFYPVDRPPKTDEELAKLAKSDARMGSQRDWDLVTVMDGSYLDENAILIIGKLFGLQGAQIVQEDSRTKRLFDAINAPEEELGAPRPLGEHLLLHHPQRAHFEALVSKKSMSEPLVDPCGPGDVIWAVQYLTELLKMNFEALIGDAETDXXXXXXXXXXXXXDAGVETPPGAVTEGLPEAAAXXXXXXXXXXXDASPERVSEGKAKLRLGDWSDDQCPYWEEKKKDLEDMDDNDTPKDEPSSFAYDTGNMYDVLEMDEEDDPDDHVDGEDDPQEHDEPRGSVDEXXXASAXXXXXXXXXX-------REHASAEXXXXXXXXXXXXXXXXXXXDDGDEWMPRVHVTKPRSWRRTGRRQLKHKNRRXXXXXXXXXXXXXXXRRGAGGLRRRAPIRGGANPGDGQVCRPKRRLAGKRAGPRDPNA---------FDEEWLKRQCTIYAMYDEPHRTIAREAAEEKVRLWKEKKEQEAR--EKQK--------------------EMARTKEP--------------GTHEKI--VPPGEPTVADGPGSTQPQQQPMNVDEPTESTQQQQPQXXXXXXXXXXXXX--------ERAPMSTVARASTATKRKPRAASKGKAKAXXXXXXXTARKVRKRRVRRPARVAAKEYARVLEDFLNSDEMATFVEASRAKAAEKADHFKDTCPRAENEPPHAIASIPLIAKLLTRGLCDDPLDGIEILDGVYFKDAALDELERYFNWEYVFDPKSIGVTLGTTKVDIDGEEFVVESFDCGEYILSDGSVMRQWGVLEYRADGGVTLEAEQRRFIIHLVTTYVNMMALVVPAVIKESTPSMVKDMMWNPVEARKRETNEERREELDQIINRVNTLRDLTLRIFTGATVKDTLPASFWDVEGNEELREFAEEAGSLKKMNFLGGLECGNNREVVTGELFTGGIVTGGYSEAPKIDRASGAWPGKLRNVIVQLTCAYRLGRSNNLLEAHYALSEAEIELVVEGHREHWDTNLKYGLPYLHLTASVETTATDADLQGENSHALRFAVKRCRVFNPSIAPVTVVGCGIRDYGKYGSLQRDSQDTKYFSHARFGSKLVPPLMGNASCRKPVEDAIEASGKLFDVARNARAKAVAEKSGAMGPAAKVRQQRVVLLELTPEEREKVMDMFMAAIAKNCCGRLMLAIEKHDPRFVEWGKKCLAKAELKSSQYTSRDNYVEKPDDGRSEDHLLGNTSADIERGQQRVARLVTKLEAD-GFKPKDISVFSVALALACLFAGACLRPQDFFR 3633
            ETGQLFYPVDRPPKTDEELAKLAKSDARMGSQRDWD+VTVMDGSYLDENAILIIGKLFGL GAQIVQED RT RLFDAINAPEEELGAPRPLGEHLLLHHPQR HFEALV KKSMSEPLVDPCGPGDVIWAV+YLTELLKMNFEAL+GDAE D XXXXXXXXXX    GVETPPGAVTE LP    XXXXXXXXXXXDASPE +SEGKAKLRLGDWSD+QC +WE+ K D +DMDD D    EP S+AYDTGNMYDVLEMD ED  DDHVDGEDDPQEHD+PRGSVDEXXX   XXXXXXXXXX       REHASAEXXXXXXXXXXXXXX      + DEW+PRV VTKPRSWRRTGRRQLKH+NR XXXXXXXXXXXXXXX   AGGLRRRAPIRGGA+PGDGQV   +R  A  R  PR P+          +D+ W +++   +    EP RT   +  + +V  WK  KE++A   E  K                     +  TK P                 EK    PP +PTVADGPGSTQPQ                   XXXXXXXXXXXXX        ERAP+STVA   TATKRKPRAASKGKAKAXXXXXXX A  VRKRRVR+PARV AKEYAR+LED LNSDEM TFVEASRAKAAEKA HF++TCPR  NEPP +I SIPLIAKLLTRGLCDDPLDGIEILDGV+FK AALD LERYFNWEYVFDP+SIGV LGTTKV ID EEFVVESFDCGEY LSDGSVM+QWGVLE R DGGVTLE EQRRFIIHLVTTYVNMMA VVP VI+ESTPSMVKDMMWNPVEA KRETN+ERREELDQIINRVNTLRDLTLRIFTGA VKDTLPASFWDVEGNEELREFAEEAGSLKK+NFLG LEC +NREVV G+LFTG IVTGGYSEAPK DR SGAWP KLR++IVQLTCAYRLGRSNNLLEA+YALSEAEIELV++GHR HW  NL YGLP+L      +TTATDADLQGENSHALRFAVKRCRVFNP+IAPVTVVGCGIRD  KYGSLQRDS D+KYFSHAR G KLVPPLMGNASCR+P + A+EASGKLFDVARN RAKA AEKSGA+GPAAKVR+QRV+LLELTPEEREK MDMFMAAI KN CGRLM AI+KHDP FVEWGK+CLAKA+LKSS YTSRDNY+E PDDGRSEDHLLGNTSA+I+RGQQRVARL+TKL+A+ GFKPKDISVFSVALALACLFAGACLRPQDFFR
Sbjct:   50 ETGQLFYPVDRPPKTDEELAKLAKSDARMGSQRDWDIVTVMDGSYLDENAILIIGKLFGLPGAQIVQEDERTGRLFDAINAPEEELGAPRPLGEHLLLHHPQRVHFEALVPKKSMSEPLVDPCGPGDVIWAVRYLTELLKMNFEALVGDAEKDGXXXXXXXXXX----GVETPPGAVTEALPXXXXXXXXXXXXXXXDASPEMISEGKAKLRLGDWSDEQCTHWEQIKMDFDDMDDTD----EPRSYAYDTGNMYDVLEMDGED-ADDHVDGEDDPQEHDQPRGSVDEXXXXXXXXXXXXXXXXXXXXXXPREHASAEXXXXXXXXXXXXXXDAPYVVEEDEWVPRVRVTKPRSWRRTGRRQLKHQNRXXXXXXXXXXXXXXXXXX-AGGLRRRAPIRGGADPGDGQV---RRTSARDRRAPRKPDEPEDLSSKARYDDAWFEKREKEWLDLPEPERTTQLDWGKGQVEAWKAGKEKKAACMECSKGTWYSDNPILLCDGCVRGALHLRCTKFPLEAIPGEEDEWFCDACREKRGETPPVQPTVADGPGSTQPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMERAPVSTVANPITATKRKPRAASKGKAKAXXXXXXXXAGNVRKRRVRKPARVVAKEYARILEDVLNSDEMGTFVEASRAKAAEKAKHFENTCPRTPNEPPSSITSIPLIAKLLTRGLCDDPLDGIEILDGVFFKRAALDALERYFNWEYVFDPESIGVFLGTTKVGIDDEEFVVESFDCGEYSLSDGSVMQQWGVLENRTDGGVTLEDEQRRFIIHLVTTYVNMMAHVVPVVIEESTPSMVKDMMWNPVEAGKRETNKERREELDQIINRVNTLRDLTLRIFTGAAVKDTLPASFWDVEGNEELREFAEEAGSLKKINFLGRLECVHNREVVAGKLFTGEIVTGGYSEAPKPDRVSGAWPAKLRSIIVQLTCAYRLGRSNNLLEAYYALSEAEIELVMKGHRSHWGVNLDYGLPHLDRLTWAQTTATDADLQGENSHALRFAVKRCRVFNPNIAPVTVVGCGIRDAEKYGSLQRDSLDSKYFSHARIGKKLVPPLMGNASCREPAKQAVEASGKLFDVARNGRAKATAEKSGAVGPAAKVRKQRVILLELTPEEREKAMDMFMAAITKNGCGRLMDAIKKHDPGFVEWGKECLAKADLKSSVYTSRDNYLETPDDGRSEDHLLGNTSAEIQRGQQRVARLMTKLDAENGFKPKDISVFSVALALACLFAGACLRPQDFFR 1310
[Close]
BLAST of mRNA_L-elsbetiae_contig14329.3198.1 vs. uniprot
Match: A0A6H5J7T3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7T3_9PHAE)

HSP 1 Score: 391 bits (1005), Expect = 1.540e-119
Identity = 302/727 (41.54%), Postives = 358/727 (49.24%), Query Frame = 1 
Query: 1474 DGPGSTQPQQQPMNVDEPTESTQQQQPQXXXXXXXXXXXXX------ERAPMSTVARASTATKRKPRAASKGKAKAXXXXXXXTARKVRKRRVRRPARVAAKEYARVLEDFLNSDEMATFVEASRAKAAEKADHFKDTCPRAENEPPHAIASIPLIAKLLTRGLCDDPLDGIEILDGVYFKDAALDELERYFNWEYVFDPKSIGVTLGTTKVDIDGEEFVVESFDCGEYILSDGSVMRQWGVLEYRADGGVTLEAEQRRFIIHLVTTYVNMMALVVPAVIKESTPSMVKDMMWNPVEARKRETNEERREELDQIINRVNTLRDLTLRIFTGATVKDTLPASFWDVEGNEELREFAEEAGSLKKMNFLGGLECGNNREVVTGELFTGGIVTGGYSEAPKIDRASGAWPGKLRNVIVQLTCAYRLGRSNNLLEAHYALSEAEIELVVEGHREHWDTNLKYGLPYLHLTASVETTATDADLQGENSHALRFAVKRCRVFNPSIAPVTVVGCGIRDYGKYGSLQRDSQDTKYFSHARFGSKLVPPLMGNASCRKPVEDAIEASGKLFDVARNARAKAVAEKSGAMGPAAKVRQQRVVLLELTPEEREKVMDMFMAAIAKNCCGRLMLAIEKHDPRFVEWGKKCLAKAELKSSQYTSRDNYVEKPDDGRSEDHLLGNTSADIERGQQRVARLVTKLEA-DGFKPKDISVFSVALAL-ACLFAGACLRPQDFF 3630
            DGPGSTQ QQQ MNVD P ESTQQQQ  XXXXXXXXXXXXX      ERAPM TVA   T T+ K R A+K               +V KRRVR P RV AKE AR+LE  L  DE+  F+E S+AKA EKA+  + TC RA  EPPHAI SIPLIAKLLT GLCDDP                                                                   +M QWG+LE R DG VTLEAEQRRF+IHLVTTYVNM+  VVPA                    R      +R+EELDQIINRVNTLRDL LR+FT A VKDTLPA FW+V GN++LREFAEE GSL+++NFL  LEC +N E+ +G+ FTG +VT                                                                                                                V+VVGCGI D  K+G LQRDS D+ YFSHAR      P LMGNA   K    ++                             K R+ RV++++ TPEEREK +D  MAAIAKN CGRLM  ++KHDP FVEWGK+ LAKA++ S+ ++SR+ ++EKPDDGRSED+L G    +I+ GQ+RVA L+ KLE  D F  KDISVFSVAL L  C     C+     +
Sbjct:   42 DGPGSTQSQQQLMNVDGPMESTQQQQQXXXXXXXXXXXXXXXXXXPTERAPMWTVANVGTTTESKGRDATK---------------RVHKRRVRWPTRVVAKENARILEACLGDDELTDFMERSKAKADEKAEEIEGTCSRAGKEPPHAITSIPLIAKLLTPGLCDDP------------------------------------------------------------------GIMHQWGLLEKRTDGVVTLEAEQRRFVIHLVTTYVNMITHVVPA--------------------RLANMRGKRKEELDQIINRVNTLRDLMLRVFTDAAVKDTLPAIFWEVYGNKDLREFAEETGSLREINFLDRLECAHNTEL-SGKSFTGEVVT---------------------------------------------------------------------------------------------------------------RVSVVGCGILDAAKHGILQRDSLDSNYFSHARLARS--PSLMGNAPFSKLTRASV-----------------------------KERRLRVIVVDQTPEEREKSIDTCMAAIAKNGCGRLMDTVKKHDPGFVEWGKEHLAKAKINSTIWSSREEFIEKPDDGRSEDNLEGKAPEEIKHGQRRVANLMAKLEVGDDFTCKDISVFSVALKLPGCSQQPFCMVASQMY 524
[Close]
BLAST of mRNA_L-elsbetiae_contig14329.3198.1 vs. uniprot
Match: A0A6H5K2A3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2A3_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 4.490e-60
Identity = 136/316 (43.04%), Postives = 188/316 (59.49%), Query Frame = 1 
Query: 2683 LRNVIVQLTCAYRLGRSNNLLEAHYALSEAEIELVVEGHREHWDTNLKYGLPYLHLTASVETTATDADLQGENSHALRFAVKRCRVFNPSIAPVTVVGCGIRDYGKYGSLQRDSQDTKYFSHARFGSKLVPPLMGNASCRKPVEDAIEASGKLFDVARNARAKAVAEKSGAMGPAAKVRQQRVVLLELTPEEREKVMDMFMAAIAKNCCGRLMLAIEKHDPRFVEWGKKCLAKAELKSSQYTSRDNYVEKPDDGRSEDHLLGNTSADIERGQQRVARLVTKLEADGFKPKDISVFSVALALACLFAGACLRPQDFF 3630
            LR++   LTCAYR GR  NLLEA+   +  E +L+ E H + W  N+ + L  L +  +     +D++L G+ S+ALRFA+ RC+ F  ++ PV VVGCGIRD  KYG +   S DT +FSHARFG +L+  ++G  S    V+  ++     F  ARN R    A  +G +G   K+R+QRV L+E TPE RE+ MDMFM A++ N C R+M A+E  DP FVE G   L +A+  S+ +        + D    E+HLLG T  ++  G++ V +L+  LE DG   +D  VFSVA  LA LF GA LRPQDFF
Sbjct:  414 LRDLSKLLTCAYRSGRPGNLLEAYQPCTLQECKLLQEHHSQ-WSANITHSLKSLSVRDTRSANVSDSELGGDMSYALRFALARCKTFVHNMPPVVVVGCGIRDAAKYGRVGLHSLDTTFFSHARFGPRLLEHVLGADSSHGAVQKTLDHCHSFFQNARNLRKHVGAYTNGGVGDGIKLRKQRVPLVEDTPEAREEAMDMFMGAMSANGCQRVMEAVETIDPGFVERGLDRLTEAKTASTLF--------ELDGIGGEEHLLGKTPEEVAEGEKSVVKLLQALEEDGIDSEDFVVFSVATHLAMLFNGATLRPQDFF 720
[Close]
BLAST of mRNA_L-elsbetiae_contig14329.3198.1 vs. uniprot
Match: A0A6H5L6S7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6S7_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.270e-57
Identity = 170/503 (33.80%), Postives = 240/503 (47.71%), Query Frame = 1 
Query: 1939 RGLCDDPL-DGIEILDGVYFKDAALDELERYFNWEYVFDPKSIGVTLGTTKVDIDGEEFVVESFDCGEYILSDGSVMRQWGVLEYRADGGVTLEAEQRRFIIHLVTTYVNMMALVVPAVIKESTPSMVKDMMWNPVEARKR----------ETNEERREELDQIINRVNTLRDLTLRIFTGATVKDTLPASFWDVEGNEELREFAEEAGSLKKMNFLGGLECGNNREVVTGELFTGGIVTGGYSEAPKIDRASGAWPGKLRNVIVQLTCAYRLGRSNNLLEAHYALSEAEIELVVEGHREHWDTNLKYGLPYLHLTASVETTATDADLQGENSHALRFAVKRCRVFNPSIAPVTVVGCGIRDYGKYGSLQRDSQDTKYFSHARFGSKLVPPLMGNASCRKPVEDAIEASGK-LFDVARNARAKAVAEKSGAMGPAAKVRQQRVVLLELTPEEREKVMDMFMAAIAKNCCGRLMLAIEKHDPRFVEWGKKCLAKAELKSSQYTS 3411
            RGLCD    + +++ D V FK + L  L+ YF+  Y+F+P SI V +G+T+V IDG  FVVESFD G+Y L+    + QW +L+ R   G TL+ E RRFII     YV MMA  VP     +     + M+WN  EA +R          E+N+   EEL  +      +R L+L IFT   + +TLP +FW    +  LR+FAE +GSL ++N L GL C + + +  G LFT  +V GG+S AP  DR  G W  KL++V   LTCAYRLGR  +L+EA+  LSE E   +++ H   W  NL + L  LH+         D++L GE S+ALR                                               G  ++  L+G  S    VE  +    +  F   RN RA   A+ SG +                          MFM A+  N C R+M AIE+ DP  +++  + L +AE  S+ + S
Sbjct:  189 RGLCDASAPNSLKLNDKVGFKRSELPGLKYYFDKNYMFNPASIEVVVGSTRVKIDGRIFVVESFDHGKYNLAGHKPITQWELLQNRRGEGATLDDELRRFIIQQADDYVVMMARAVPYF--HNCGIATEGMLWNIKEAVERARAHPDNIDVESNKMTLEELASLQEGHEKMRSLSLEIFTTLPLSETLPKNFWGGAVDGSLRDFAEGSGSLSQLNCLKGLGCASRKGMTEGCLFTEDVVGGGHSIAPSHDRPRGTWDEKLKSVSRLLTCAYRLGRPVSLVEAYIPLSEGECN-ILDAHHGQWKDNLAFSLKGLHVGLEESVDVNDSELTGEKSNALRA----------------------------------------------GPGILQKLLGTDSSTVAVERIVSVKVENFFQKVRNNRAHIEAKTSGGVR-------------------------MFMEALDVNGCRRIMEAIERIDPGIIDFLLERLGRAERASTTWDS 617
[Close]
BLAST of mRNA_L-elsbetiae_contig14329.3198.1 vs. uniprot
Match: D8LJ27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ27_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 1.810e-38
Identity = 103/265 (38.87%), Postives = 146/265 (55.09%), Query Frame = 1 
Query: 2854 ASVETTATDADLQGENSHALRFAVKRCRVFNPSIAPVTVV------GCGIRDYGKYGSLQRDSQDTKYFSHARFGSKLVPPLMGNASCRKPVEDAIEASGKLFDVARNARAKAVAEKSGAMGPAAKVRQQRVVLLELTPEEREKVMDMFMAAIAKNCCGRLMLAIEKHDPRFVEWGKKCLAKAELKSSQYTSRDNYVEKPDDGRSEDHLLGNTSADIERGQQRVARLVTKLEADGFKPKDISVFSVALALACLFAGACLRPQDFF 3630
            AS     TD + + + S  +   V+   + + S+A  T +      G    D  KYG +   S DT +FSHARF  +L+  ++G  S    V+  ++     F  ARN R    A+ +G +G   K+R+QRV L+E TPEERE+ MDMF+ A++ N C R+M AI+K DP FV+WG   L +A+  S+ +        + DD   E+HLLG TS  +  G++ V  L+  L+ DG   KD  +FSVA  LA LF GA LRPQDFF
Sbjct:  232 ASRSGDDTDPERKMKISELMSIKVRVDTLRDLSLAVFTKIPVEATLGANFWDAAKYGRVGLHSLDTTFFSHARFSPRLLEHVLGADSSHGAVQRTLDHCHSFFQNARNLRKHVAAKTNGGVGDGIKLRKQRVPLVENTPEEREETMDMFVGAMSANGCQRVMEAIDKVDPGFVDWGLDRLTEAKNASTLF--------ELDDIGGEEHLLGKTSEGVAEGEKMVVTLLKALDEDGVDSKDFVLFSVATHLAMLFNGATLRPQDFF 488
[Close]
BLAST of mRNA_L-elsbetiae_contig14329.3198.1 vs. uniprot
Match: A0A6H5JNX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX5_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 8.810e-35
Identity = 131/316 (41.46%), Postives = 165/316 (52.22%), Query Frame = 1 
Query:  130 SYLDENAILII-GKLFGLQGAQIVQEDSRTKRLFDAINAPEEELGAPRPLGEHLLLHHPQRAHFEALVSKKSMSEPLVDPCGPGDVIWAVQYLTELLKMNFEALIGDAETDXXXXXXXXXXXXXDAGVETPPGAVTEGLPEAAAXXXXXXXXXXXDASPERVSEGKAKLRLGDWSDDQCPYWEEKKKDLEDMDDNDTPKDEPSSFAYDTGNMYDVLEMDEEDDPDDHVDGEDDPQEHDEPRGSVDEXXXASAXXXXXXXXXXREHASAEXXXXXXXXXXXXXXXXXXXDDGDEWMPRVHVTKPRSWRRTGRRQLKH 1074
            +++D+NA++++ GKLFGLQ  QIVQ ++ T++L DA   P ++LG PRPLG++ +LH P  A F ALVSK SM+ P+ DPCGP DV W V YLTELL+MNF+ L+ + ET+                            P++AA XXXXXXXXXX                                               S+  Y       +LE  EED P +HVD E+DPQEH    G+ D+     A          +EH        XXXXXXXXXXXXXX D+ DEWMPRV VT PRSWRRTGR Q KH
Sbjct:    6 AFVDDNAVVMLTGKLFGLQ-VQIVQMNNDTRQLHDATEVPTKDLGVPRPLGKYFVLHRPHCALFGALVSKASMTHPVDDPCGPDDVSWVVNYLTELLEMNFQTLVAEVETECE--------------------------PDSAAAXXXXXXXXXXXTD--------------------------------------------SNMVYCV-----LLEKGEEDAPQEHVDAENDPQEH--VVGAEDD-----AQDLWRGGRARQEHVVGVEGAPXXXXXXXXXXXXXXVDEEDEWMPRVRVTTPRSWRRTGRGQHKH 238
[Close]
BLAST of mRNA_L-elsbetiae_contig14329.3198.1 vs. uniprot
Match: A0A6H5JTS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTS7_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 5.500e-26
Identity = 99/285 (34.74%), Postives = 124/285 (43.51%), Query Frame = 1 
Query: 2527 AGSLKKMN-----FLGGLECGNNREVVTGELFTGGIVTGGYSEAPKIDRASGAWPGKLRNVIVQLTCAYRLGRSNNLLEAHYALSEAEIELVVEGHREHWDTNLKYGLPYLHLTASVETTATDADLQGENSHALRFAVKRCRVFNPSIAPVTVVGCGIRDYGKYGSLQRDSQDTKYFSHARFGSKLVPPLMGNASCRKPVEDAIEASGKLFDVARNARAKAVAEKSGAMGPAAKVRQQRVVLLELTPEEREKVMDMFMAAIAKNCCGRLMLAIEKHDPRFVEWGK 3366
            A S K++N     FLG LEC  NREV++G LFTG +VT  + +APK  +  GAW  KLR+VIVQLTC YRLGRS N LEA+YALS  E+EL++  H              LH                            C+V                                                                      ARN RA   AEKSG +G +AK R  R+V    TP+ RE+ MDMFMAAI +N CGRL+ AI+K+D  F+ WG+
Sbjct:    7 ASSRKRLNGSKNDFLGRLECDKNREVLSGNLFTGEVVTEDFFDAPKHGKY-GAWHAKLRSVIVQLTCGYRLGRSANFLEAYYALSAVEVELLICHH--------------LH----------------------------CKV----------------------------------------------------------------------ARNGRATRAAEKSGGIGASAKERPCRLVFFHQTPKGREETMDMFMAAITRNGCGRLVDAIKKYDADFI-WGQ 177
[Close]
BLAST of mRNA_L-elsbetiae_contig14329.3198.1 vs. uniprot
Match: A0A6H5JMG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG0_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.950e-13
Identity = 52/139 (37.41%), Postives = 72/139 (51.80%), Query Frame = 1 
Query:   43 TDEELAKLAKSDARMGSQRDWDLVTVMDGSYLDENAILIIGKLFGLQGAQIVQEDSRTKRLFDAINAPEEELGAPRPLGEHLLLHHPQRAHFEALVSKKSMSEPLVDPCGPGDVIWAVQYLTELLKMNFEALIGDAETD 459
            T +E+ +L +S A MGSQRDW+ +T++ G +L E+A+LIIGKL GL   QI+ ED    +L+DA    E  +   RPL        P                    PCG  +VI   QY+ E+ + NFEAL+  A  D
Sbjct:   44 TKKEITELVQSAANMGSQRDWEFITMLAGFFLHEHAVLIIGKLLGLPDLQIIHEDIAKIQLYDAT---EPSVLCSRPLTLTPTFSQPSPGKHNGASGW---------PCG--EVISVAQYVMEIFEANFEALVAGAAGD 168
[Close]
BLAST of mRNA_L-elsbetiae_contig14329.3198.1 vs. uniprot
Match: D8LC45_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC45_ECTSI)

HSP 1 Score: 60.1 bits (144), Expect = 2.360e-6
Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = 1 
Query:    1 ETGQLFYPVDRPPKTDEELAKLAKSDARMGSQRDWDLVTVMDGSYLDENAILIIGKLFGLQGAQIVQEDSRT-KRLFDAINAPEEELGAPRPLGEHLLLHHPQRAHFEALVSK 336
            E G  F       K D ++  +AKS A + +  DW  VT+  G YLD+ A++I+GKL   +  Q+V+ED    +R+ DA   P   LGA      +L+LH  + AHFEAL+ K
Sbjct:   75 EGGGFFVGQSDSDKPDADIKSMAKSTADICTLEDWKRVTLCPGGYLDDKALVILGKLLLREVIQLVKEDGIVGERIVDA-REPSALLGA------NLVLH--RGAHFEALLPK 178
[Close]
BLAST of mRNA_L-elsbetiae_contig14329.3198.1 vs. uniprot
Match: D7FU51_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU51_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 4.550e-6
Identity = 42/146 (28.77%), Postives = 76/146 (52.05%), Query Frame = 1 
Query: 3052 RFGSKLVPPLMGNASCRKPVEDAIEASGK-LFDVARNARAKAVAEKSGAMGPAAKVRQQRVVLLELTPEEREKVMDMFMAAIAKNCCGRLMLAIEKHDPRFVEWGKKCLAKAELKSSQYTSRDNYVEKPDDGRSEDHLLGNTSADI 3486
            R G  L+  ++ N  C +  +   E   K + D  RN R    A  +G+ G ++K R+ R+ L++ +PE+RE+ ++++M  +  +    +M AI+K D  F++WG + LA+A+  S+ +          DD +  DHL G T   +
Sbjct:    5 RNGGHLLLEILENDPCEEAAKRMFEKISKSILDKTRNERTSWDAVINGSTGESSKQRKCRIGLVDDSPEDRERNLEIYMRLVFVDGIRPVMEAIDKIDSEFIDWGVERLAEAKGVSTSFDR--------DDIKGIDHLFGGTREQV 142
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14329.3198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LPM1_ECTSI0.000e+076.61PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5J7T3_9PHAE1.540e-11941.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2A3_9PHAE4.490e-6043.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6S7_9PHAE1.270e-5733.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ27_ECTSI1.810e-3838.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNX5_9PHAE8.810e-3541.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTS7_9PHAE5.500e-2634.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMG0_9PHAE2.950e-1337.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LC45_ECTSI2.360e-638.05Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FU51_ECTSI4.550e-628.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14329contigL-elsbetiae_contig14329:42..4640 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score144.1
Seed ortholog evalue4.4e-31
Seed eggNOG ortholog2880.D7FHJ0
Hectar predicted targeting categoryother localisation
EggNOG OGs2EVBK@1,2SXC2@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size3636
Cds size3636
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14329.3198.1prot_L-elsbetiae_contig14329.3198.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14329 42..4640 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815572.2886014-CDS-L-elsbetiae_contig14329:41..10911622815572.2886014-CDS-L-elsbetiae_contig14329:41..1091Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14329 42..1091 -
1691682966.957167-CDS-L-elsbetiae_contig14329:41..10911691682966.957167-CDS-L-elsbetiae_contig14329:41..1091Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14329 42..1091 -
1622815572.301879-CDS-L-elsbetiae_contig14329:1520..26451622815572.301879-CDS-L-elsbetiae_contig14329:1520..2645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14329 1521..2645 -
1691682966.9703481-CDS-L-elsbetiae_contig14329:1520..26451691682966.9703481-CDS-L-elsbetiae_contig14329:1520..2645Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14329 1521..2645 -
1622815572.3196523-CDS-L-elsbetiae_contig14329:2770..30251622815572.3196523-CDS-L-elsbetiae_contig14329:2770..3025Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14329 2771..3025 -
1691682966.9813492-CDS-L-elsbetiae_contig14329:2770..30251691682966.9813492-CDS-L-elsbetiae_contig14329:2770..3025Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14329 2771..3025 -
1622815572.3351982-CDS-L-elsbetiae_contig14329:3159..37471622815572.3351982-CDS-L-elsbetiae_contig14329:3159..3747Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14329 3160..3747 -
1691682966.992615-CDS-L-elsbetiae_contig14329:3159..37471691682966.992615-CDS-L-elsbetiae_contig14329:3159..3747Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14329 3160..3747 -
1622815572.3477573-CDS-L-elsbetiae_contig14329:3904..41861622815572.3477573-CDS-L-elsbetiae_contig14329:3904..4186Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14329 3905..4186 -
1691682967.0032399-CDS-L-elsbetiae_contig14329:3904..41861691682967.0032399-CDS-L-elsbetiae_contig14329:3904..4186Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14329 3905..4186 -
1622815572.3587673-CDS-L-elsbetiae_contig14329:4304..46401622815572.3587673-CDS-L-elsbetiae_contig14329:4304..4640Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14329 4305..4640 -
1691682967.0164459-CDS-L-elsbetiae_contig14329:4304..46401691682967.0164459-CDS-L-elsbetiae_contig14329:4304..4640Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14329 4305..4640 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14329.3198.1

>prot_L-elsbetiae_contig14329.3198.1 ID=prot_L-elsbetiae_contig14329.3198.1|Name=mRNA_L-elsbetiae_contig14329.3198.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1212bp
ETGQLFYPVDRPPKTDEELAKLAKSDARMGSQRDWDLVTVMDGSYLDENA
ILIIGKLFGLQGAQIVQEDSRTKRLFDAINAPEEELGAPRPLGEHLLLHH
PQRAHFEALVSKKSMSEPLVDPCGPGDVIWAVQYLTELLKMNFEALIGDA
ETDGETDGETDGETDSDAGVETPPGAVTEGLPEAAADAETDGETDSDDAS
PERVSEGKAKLRLGDWSDDQCPYWEEKKKDLEDMDDNDTPKDEPSSFAYD
TGNMYDVLEMDEEDDPDDHVDGEDDPQEHDEPRGSVDEEDDASADDPPRE
HDEPREHASAEDEPREHASAEDAPQDDSGVDDGDEWMPRVHVTKPRSWRR
TGRRQLKHKNRRLRDKRHRRRCRHHRQRRGAGGLRRRAPIRGGANPGDGQ
VCRPKRRLAGKRAGPRDPNAFDEEWLKRQCTIYAMYDEPHRTIAREAAEE
KVRLWKEKKEQEAREKQKEMARTKEPGTHEKIVPPGEPTVADGPGSTQPQ
QQPMNVDEPTESTQQQQPQPVEATRQQQQQPTERAPMSTVARASTATKRK
PRAASKGKAKAGKAKAGSTARKVRKRRVRRPARVAAKEYARVLEDFLNSD
EMATFVEASRAKAAEKADHFKDTCPRAENEPPHAIASIPLIAKLLTRGLC
DDPLDGIEILDGVYFKDAALDELERYFNWEYVFDPKSIGVTLGTTKVDID
GEEFVVESFDCGEYILSDGSVMRQWGVLEYRADGGVTLEAEQRRFIIHLV
TTYVNMMALVVPAVIKESTPSMVKDMMWNPVEARKRETNEERREELDQII
NRVNTLRDLTLRIFTGATVKDTLPASFWDVEGNEELREFAEEAGSLKKMN
FLGGLECGNNREVVTGELFTGGIVTGGYSEAPKIDRASGAWPGKLRNVIV
QLTCAYRLGRSNNLLEAHYALSEAEIELVVEGHREHWDTNLKYGLPYLHL
TASVETTATDADLQGENSHALRFAVKRCRVFNPSIAPVTVVGCGIRDYGK
YGSLQRDSQDTKYFSHARFGSKLVPPLMGNASCRKPVEDAIEASGKLFDV
ARNARAKAVAEKSGAMGPAAKVRQQRVVLLELTPEEREKVMDMFMAAIAK
NCCGRLMLAIEKHDPRFVEWGKKCLAKAELKSSQYTSRDNYVEKPDDGRS
EDHLLGNTSADIERGQQRVARLVTKLEADGFKPKDISVFSVALALACLFA
GACLRPQDFFR*
back to top

mRNA from alignment at L-elsbetiae_contig14329:42..4640-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14329.3198.1 ID=mRNA_L-elsbetiae_contig14329.3198.1|Name=mRNA_L-elsbetiae_contig14329.3198.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4599bp|location=Sequence derived from alignment at L-elsbetiae_contig14329:42..4640- (Laminarionema elsbetiae ELsaHSoW15)
GAGACGGGGCAGCTGTTTTACCCCGTCGACCGCCCACCCAAGACGGACGA
AGAACTCGCGAAGCTGGCCAAGTCGGATGCACGAATGGGCAGCCAGCGCG
ACTGGGATCTCGTCACCGTGATGGACGGGTCTTACCTGGACGAGAACGCC
ATCCTGATCATCGGGAAGCTTTTCGGCCTTCAGGGTGCGCAAATCGTCCA
AGAGGATAGCCGGACTAAACGGCTGTTCGACGCCATCAATGCTCCCGAAG
AAGAGCTAGGAGCACCTCGTCCCCTGGGGGAACACTTGCTGCTACACCAC
CCCCAGCGTGCGCACTTCGAGGCTCTTGTGTCCAAGGTCAGATTATTTTC
CGTGTTGGTAGTTTTAATTTTTCGTGTTTTCGTGAGCCGAACAATTTACA
CATTTACTCGTCGGAATACTCACCCCCACTGCCTTCCACTTCTCTTCCCA
CCAGAAAAGCATGTCGGAGCCCTTGGTTGACCCCTGTGGACCCGGAGACG
TCATCTGGGCGGTGCAGTACCTCACTGAGCTTCTGAAGATGAACTTTGAG
GCGCTCATCGGAGACGCGGAGACGGACGGCGAGACGGACGGTGAGACGGA
CGGCGAGACGGACAGCGACGCCGGTGTGGAGACCCCCCCTGGTGCTGTAA
CCGAGGGGCTTCCCGAGGCTGCCGCCGATGCAGAGACGGACGGCGAGACG
GACAGTGACGACGCTTCTCCCGAAAGGGTTTCTGAGGTAAGCAGGGTTAA
GGTCGAGTTAAGGTCGATTTGGAACGTACGTGCCTGCCTCGGGACGCAGT
CGGGTGAACACTCTCGTTCTACGCGGAAACCAGTTTGCTTTTCTGGTTTA
TCTAACTTAGTTATTCTGTTTCACGCTTTTGATTTGTTCTCAGGGGAAGG
CCAAACTAAGGCTCGGCGACTGGTCGGACGATCAATGCCCTTACTGGGAG
GAGAAGAAGAAAGACCTCGAGGACATGGACGACAACGACACGCCCAAGGA
CGAGCCCAGCTCGTTCGCGTACGACACGGGCAACATGTACGATGTGCTGG
AGATGGACGAGGAGGACGACCCCGACGACCACGTGGACGGCGAGGACGAC
CCCCAGGAACACGACGAGCCCCGGGGGAGCGTGGACGAGGAAGACGACGC
GTCCGCGGATGACCCCCCCCGGGAGCACGACGAGCCCCGGGAGCACGCGA
GCGCGGAGGACGAGCCCCGGGAGCACGCGAGCGCGGAGGACGCCCCCCAG
GACGATTCCGGCGTTGACGATGGAGACGAGTGGATGCCGCGGGTTCATGT
GACCAAGCCTCGCAGCTGGCGGAGGACTGGCCGTCGTCAACTCAAGCACA
AGAACCGGCGCCTCCGCGACAAACGCCACCGCCGCCGATGCCGCCACCAC
CGCCAACGACGCGGGGCCGGTGGCCTTCGCCGACGTGCCCCGATACGAGG
CGGAGCGAACCCAGGGGACGGACAGGTGTGTGTGTGGTTTGTCTTTTTGT
ACGTCTGTGTTTGCGCTGTCTGTTTTGATTGTCGTTTGATTGACCGGTGG
ATCTATCTAGTGCCTTGTACGCTAAACGTCAAAACGCCTCGATTTCTTTG
AAACAGGTGCGTGAGAGGCCGAAACGACGATTGGCAGGTAAACGCGCTGG
TCCTCGTGATCCGAATGCATTCGACGAGGAGTGGTTGAAACGTCAATGTA
CCATCTACGCCATGTACGATGAGCCCCATAGAACGATAGCTCGGGAGGCG
GCCGAGGAGAAGGTCCGGTTGTGGAAAGAGAAAAAGGAGCAGGAAGCCCG
CGAGAAGCAGAAGGAGATGGCTCGAACGAAGGAGCCGGGAACCCACGAGA
AGATTGTGCCACCCGGGGAGGTGAGTTTCGCTGGTATAAATATTCATCAG
GCACATTTTATTTTATCATGAGCCTCGGAGTGCGTTGCTTCAATGTTTCG
TACTCGTGTTGACCACGTCATTCCATTGCTCGATATCCCTCGCAGCCGAC
GGTCGCGGACGGGCCGGGGTCGACTCAGCCGCAGCAGCAGCCGATGAACG
TGGATGAGCCCACAGAGTCAACCCAGCAGCAGCAACCGCAGCCGGTGGAG
GCAACCCGGCAGCAGCAGCAGCAGCCGACGGAACGGGCTCCCATGTCGAC
GGTAGCGAGGGCGAGCACGGCCACCAAACGGAAACCGCGCGCTGCATCGA
AGGGCAAGGCCAAAGCTGGTAAGGCCAAGGCCGGTTCGACGGCTCGCAAG
GTGCGCAAACGGCGCGTCCGGAGGCCCGCTAGGGTCGCTGCGAAGGAATA
TGCGCGCGTACTCGAAGATTTTTTGAACAGTGACGAGATGGCCACGTTTG
TGGAGGCAAGCAGGGCAAAGGCCGCTGAAAAAGCGGACCACTTCAAGGAT
ACGTGTCCCCGCGCGGAAAACGAGCCACCCCATGCGATCGCATCGATCCC
TCTCATCGCCAAACTACTCACTCGAGGATTGTGCGACGACCCATTGGACG
GTATCGAGATTTTGGACGGGGTGTATTTCAAGGACGCCGCCCTTGATGAG
CTCGAGCGTTATTTCAACTGGGAGTACGTGTTCGATCCAAAGAGCATCGG
GGTGACCTTGGGAACGACCAAGGTTGACATCGACGGCGAGGAGTTCGTGG
TGGAGTCGTTCGACTGTGGCGAGTACATCCTGTCGGATGGTAGCGTAATG
CGGCAGTGGGGCGTCCTGGAATATCGGGCCGACGGTGGCGTGACACTGGA
GGCCGAACAACGGCGGTTCATCATCCACCTGGTGACGACGTACGTGAACA
TGATGGCTCTTGTCGTGCCGGCTGTGATAAAGGAGTCCACCCCAAGCATG
GTGAAAGATATGATGTGGAACCCCGTGGAGGCTCGTAAACGCGAGACGAA
CGAGGAGCGGAGGGAGGAGCTGGACCAGATCATCAACCGTGTAAACACTC
TGCGGGACCTGACGCTGAGGATCTTCACCGGAGCCACCGTGAAGGACACA
CTGCCCGCGAGTTTCTGGGATGTGGAGGGGAACGAGGAGTTGCGCGAGTT
CGCGGAAGAGGCTGGATCGCTCAAAAAGATGAACTTCCTCGGTGGTCTTG
AGTGCGGCAACAACCGTGAGGTGAGTCAAAAACACCGTAGGGGTTGAGAG
TTTTGGGCCGAAAGTTGCCTGGTGTTTGAATTCGGTGCTATGTGGTTGGT
TGTTCGGTCGCGAGTGTCTTTTTACGTGTGGGCGGTGGCGGTTTACTATC
CCTGGAGCTTCCGATGCGCCTGAGCCTTCCTTCCGTGAGGTTCGTGCTGT
TCAATGATGCACGTTGGACATTACCATCATTGTTAATGGAGCAATCAAGC
TAGGGGCTGAGAGATGCGGAAACGTTGGTGCTCGGGGAGCGAGGAGTTTT
CGGATAGACAATCCGGTCGGTGGAGCAATTATCCGAAACAAACCTTGAGC
ACATATCTACCCCGCGCAAATGTTAGTTGGTTCTCGCTCAACCATCGTAG
CCTCGTTCGTTGAAGCTTTTATGCCCAACCCCATCGCGGCACGCCTCAGG
TGGTGACTGGGGAGTTGTTCACCGGAGGGATTGTGACTGGGGGATACTCT
GAAGCACCCAAAATAGACCGCGCAAGCGGGGCCTGGCCTGGGAAGCTAAG
GAACGTCATCGTGCAATTGACATGTGCGTATCGATTGGGCCGCTCGAACA
ACCTCCTCGAGGCACATTACGCGCTATCTGAGGCGGAGATAGAGCTTGTA
GTTGAGGGTCACCGTGAACACTGGGATACCAACCTAAAATACGGTCTCCC
ATATCTTCACCTGACGGCATCGGTAGAAACAACTGCCACCGATGCCGACC
TTCAAGGAGAGAATTCGCACGCGTTGCGTTTTGCTGTGAAGCGGTGTCGG
GTTTTCAACCCCAGCATTGCACCCGTGACGGTAGTTGGGTGCGGGATTCG
GGACTATGGAAAGTACGGGAGTCTTCAACGAGACTCGCAGGACACGAAGT
ACTTTAGTCACGCTCGATTTGGCAGTAAACTCGTCCCTCCCCTGATGGGG
AATGCTTCGTGTAGAAAACCGGTGGAAGATGCTATTGAAGCATCGGGGAA
GTTGTTTGATGTGGCGAGGAATGCTAGAGCCAAGGCAGTTGCTGAAAAGA
GCGGGGCCATGGGACCCGCGGCCAAAGTGCGCCAGCAAAGGGTCGTTTTG
TTGGAGCTAACGCCAGAGGAACGGGAGAAAGTCATGGATATGTTCATGGC
AGCTATCGCCAAGAATTGTTGCGGGCGCCTGATGCTCGCCATCGAGAAGC
ATGACCCCCGTTTCGTAGAGTGGGGGAAGAAGTGTCTGGCGAAGGCGGAA
TTAAAGTCTAGCCAGTATACGAGCAGGGACAATTATGTTGAAAAGCCCGA
CGACGGCCGCTCCGAAGACCACCTGCTGGGAAACACTTCCGCAGACATTG
AGCGTGGGCAGCAGAGGGTGGCGCGCCTCGTGACGAAGCTCGAGGCGGAT
GGTTTCAAGCCTAAAGACATCTCCGTCTTCAGCGTGGCTCTGGCGCTGGC
TTGCCTGTTCGCAGGAGCCTGTCTTCGTCCCCAAGACTTTTTCAGGTGA
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig14329:42..4640-

>mRNA_L-elsbetiae_contig14329.3198.1 ID=mRNA_L-elsbetiae_contig14329.3198.1|Name=mRNA_L-elsbetiae_contig14329.3198.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=7272bp|location=Sequence derived from alignment at L-elsbetiae_contig14329:42..4640- (Laminarionema elsbetiae ELsaHSoW15)
GAGACGGGGCAGCTGTTTTACCCCGTCGACCGCCCACCCAAGACGGACGA
AGAACTCGCGAAGCTGGCCAAGTCGGATGCACGAATGGGCAGCCAGCGCG
ACTGGGATCTCGTCACCGTGATGGACGGGTCTTACCTGGACGAGAACGCC
ATCCTGATCATCGGGAAGCTTTTCGGCCTTCAGGGTGCGCAAATCGTCCA
AGAGGATAGCCGGACTAAACGGCTGTTCGACGCCATCAATGCTCCCGAAG
AAGAGCTAGGAGCACCTCGTCCCCTGGGGGAACACTTGCTGCTACACCAC
CCCCAGCGTGCGCACTTCGAGGCTCTTGTGTCCAAGGAGACGGGGCAGCT
GTTTTACCCCGTCGACCGCCCACCCAAGACGGACGAAGAACTCGCGAAGC
TGGCCAAGTCGGATGCACGAATGGGCAGCCAGCGCGACTGGGATCTCGTC
ACCGTGATGGACGGGTCTTACCTGGACGAGAACGCCATCCTGATCATCGG
GAAGCTTTTCGGCCTTCAGGGTGCGCAAATCGTCCAAGAGGATAGCCGGA
CTAAACGGCTGTTCGACGCCATCAATGCTCCCGAAGAAGAGCTAGGAGCA
CCTCGTCCCCTGGGGGAACACTTGCTGCTACACCACCCCCAGCGTGCGCA
CTTCGAGGCTCTTGTGTCCAAGAAAAGCATGTCGGAGCCCTTGGTTGACC
CCTGTGGACCCGGAGACGTCATCTGGGCGGTGCAGTACCTCACTGAGCTT
CTGAAGATGAACTTTGAGGCGCTCATCGGAGACGCGGAGACGGACGGCGA
GACGGACGGTGAGACGGACGGCGAGACGGACAGCGACGCCGGTGTGGAGA
CCCCCCCTGGTGCTGTAACCGAGGGGCTTCCCGAGGCTGCCGCCGATGCA
GAGACGGACGGCGAGACGGACAGTGACGACGCTTCTCCCGAAAGGGTTTC
TGAGAAAAGCATGTCGGAGCCCTTGGTTGACCCCTGTGGACCCGGAGACG
TCATCTGGGCGGTGCAGTACCTCACTGAGCTTCTGAAGATGAACTTTGAG
GCGCTCATCGGAGACGCGGAGACGGACGGCGAGACGGACGGTGAGACGGA
CGGCGAGACGGACAGCGACGCCGGTGTGGAGACCCCCCCTGGTGCTGTAA
CCGAGGGGCTTCCCGAGGCTGCCGCCGATGCAGAGACGGACGGCGAGACG
GACAGTGACGACGCTTCTCCCGAAAGGGTTTCTGAGGGGAAGGCCAAACT
AAGGCTCGGCGACTGGTCGGACGATCAATGCCCTTACTGGGAGGAGAAGA
AGAAAGACCTCGAGGACATGGACGACAACGACACGCCCAAGGACGAGCCC
AGCTCGTTCGCGTACGACACGGGCAACATGTACGATGTGCTGGAGATGGA
CGAGGAGGACGACCCCGACGACCACGTGGACGGCGAGGACGACCCCCAGG
AACACGACGAGCCCCGGGGGAGCGTGGACGAGGAAGACGACGCGTCCGCG
GATGACCCCCCCCGGGAGCACGACGAGCCCCGGGAGCACGCGAGCGCGGA
GGACGAGCCCCGGGAGCACGCGAGCGCGGAGGACGCCCCCCAGGACGATT
CCGGCGTTGACGATGGAGACGAGTGGATGCCGCGGGTTCATGTGACCAAG
CCTCGCAGCTGGCGGAGGACTGGCCGTCGTCAACTCAAGCACAAGAACCG
GCGCCTCCGCGACAAACGCCACCGCCGCCGATGCCGCCACCACCGCCAAC
GACGCGGGGCCGGTGGCCTTCGCCGACGTGCCCCGATACGAGGCGGAGCG
AACCCAGGGGACGGACAGGTGTGTGGGAAGGCCAAACTAAGGCTCGGCGA
CTGGTCGGACGATCAATGCCCTTACTGGGAGGAGAAGAAGAAAGACCTCG
AGGACATGGACGACAACGACACGCCCAAGGACGAGCCCAGCTCGTTCGCG
TACGACACGGGCAACATGTACGATGTGCTGGAGATGGACGAGGAGGACGA
CCCCGACGACCACGTGGACGGCGAGGACGACCCCCAGGAACACGACGAGC
CCCGGGGGAGCGTGGACGAGGAAGACGACGCGTCCGCGGATGACCCCCCC
CGGGAGCACGACGAGCCCCGGGAGCACGCGAGCGCGGAGGACGAGCCCCG
GGAGCACGCGAGCGCGGAGGACGCCCCCCAGGACGATTCCGGCGTTGACG
ATGGAGACGAGTGGATGCCGCGGGTTCATGTGACCAAGCCTCGCAGCTGG
CGGAGGACTGGCCGTCGTCAACTCAAGCACAAGAACCGGCGCCTCCGCGA
CAAACGCCACCGCCGCCGATGCCGCCACCACCGCCAACGACGCGGGGCCG
GTGGCCTTCGCCGACGTGCCCCGATACGAGGCGGAGCGAACCCAGGGGAC
GGACAGGTGTGTAGGCCGAAACGACGATTGGCAGGTAAACGCGCTGGTCC
TCGTGATCCGAATGCATTCGACGAGGAGTGGTTGAAACGTCAATGTACCA
TCTACGCCATGTACGATGAGCCCCATAGAACGATAGCTCGGGAGGCGGCC
GAGGAGAAGGTCCGGTTGTGGAAAGAGAAAAAGGAGCAGGAAGCCCGCGA
GAAGCAGAAGGAGATGGCTCGAACGAAGGAGCCGGGAACCCACGAGAAGA
TTGTGCCACCCGGGGAGAGGCCGAAACGACGATTGGCAGGTAAACGCGCT
GGTCCTCGTGATCCGAATGCATTCGACGAGGAGTGGTTGAAACGTCAATG
TACCATCTACGCCATGTACGATGAGCCCCATAGAACGATAGCTCGGGAGG
CGGCCGAGGAGAAGGTCCGGTTGTGGAAAGAGAAAAAGGAGCAGGAAGCC
CGCGAGAAGCAGAAGGAGATGGCTCGAACGAAGGAGCCGGGAACCCACGA
GAAGATTGTGCCACCCGGGGAGCCGACGGTCGCGGACGGGCCGGGGTCGA
CTCAGCCGCAGCAGCAGCCGATGAACGTGGATGAGCCCACAGAGTCAACC
CAGCAGCAGCAACCGCAGCCGGTGGAGGCAACCCGGCAGCAGCAGCAGCA
GCCGACGGAACGGGCTCCCATGTCGACGGTAGCGAGGGCGAGCACGGCCA
CCAAACGGAAACCGCGCGCTGCATCGAAGGGCAAGGCCAAAGCTGGTAAG
GCCAAGGCCGGTTCGACGGCTCGCAAGGTGCGCAAACGGCGCGTCCGGAG
GCCCGCTAGGGTCGCTGCGAAGGAATATGCGCGCGTACTCGAAGATTTTT
TGAACAGTGACGAGATGGCCACGTTTGTGGAGGCAAGCAGGGCAAAGGCC
GCTGAAAAAGCGGACCACTTCAAGGATACGTGTCCCCGCGCGGAAAACGA
GCCACCCCATGCGATCGCATCGATCCCTCTCATCGCCAAACTACTCACTC
GAGGATTGTGCGACGACCCATTGGACGGTATCGAGATTTTGGACGGGGTG
TATTTCAAGGACGCCGCCCTTGATGAGCTCGAGCGTTATTTCAACTGGGA
GTACGTGTTCGATCCAAAGAGCATCGGGGTGACCTTGGGAACGACCAAGG
TTGACATCGACGGCGAGGAGTTCGTGGTGGAGTCGTTCGACTGTGGCGAG
TACATCCTGTCGGATGGTAGCGTAATGCGGCAGTGGGGCGTCCTGGAATA
TCGGGCCGACGGTGGCGTGACACTGGAGGCCGAACAACGGCGGTTCATCA
TCCACCTGGTGACGACGTACGTGAACATGATGGCTCTTGTCGTGCCGGCT
GTGATAAAGGAGTCCACCCCAAGCATGGTGAAAGATATGATGTGGAACCC
CGTGGAGGCTCGTAAACGCGAGACGAACGAGGAGCGGAGGGAGGAGCTGG
ACCAGATCATCAACCGTGTAAACACTCTGCGGGACCTGACGCTGAGGATC
TTCACCGGAGCCACCGTGAAGGACACACTGCCCGCGAGTTTCTGGGATGT
GGAGGGGAACGAGGAGTTGCGCGAGTTCGCGGAAGAGGCTGGATCGCTCA
AAAAGATGAACTTCCTCGGTGGTCTTGAGTGCGGCAACAACCGTGAGCCG
ACGGTCGCGGACGGGCCGGGGTCGACTCAGCCGCAGCAGCAGCCGATGAA
CGTGGATGAGCCCACAGAGTCAACCCAGCAGCAGCAACCGCAGCCGGTGG
AGGCAACCCGGCAGCAGCAGCAGCAGCCGACGGAACGGGCTCCCATGTCG
ACGGTAGCGAGGGCGAGCACGGCCACCAAACGGAAACCGCGCGCTGCATC
GAAGGGCAAGGCCAAAGCTGGTAAGGCCAAGGCCGGTTCGACGGCTCGCA
AGGTGCGCAAACGGCGCGTCCGGAGGCCCGCTAGGGTCGCTGCGAAGGAA
TATGCGCGCGTACTCGAAGATTTTTTGAACAGTGACGAGATGGCCACGTT
TGTGGAGGCAAGCAGGGCAAAGGCCGCTGAAAAAGCGGACCACTTCAAGG
ATACGTGTCCCCGCGCGGAAAACGAGCCACCCCATGCGATCGCATCGATC
CCTCTCATCGCCAAACTACTCACTCGAGGATTGTGCGACGACCCATTGGA
CGGTATCGAGATTTTGGACGGGGTGTATTTCAAGGACGCCGCCCTTGATG
AGCTCGAGCGTTATTTCAACTGGGAGTACGTGTTCGATCCAAAGAGCATC
GGGGTGACCTTGGGAACGACCAAGGTTGACATCGACGGCGAGGAGTTCGT
GGTGGAGTCGTTCGACTGTGGCGAGTACATCCTGTCGGATGGTAGCGTAA
TGCGGCAGTGGGGCGTCCTGGAATATCGGGCCGACGGTGGCGTGACACTG
GAGGCCGAACAACGGCGGTTCATCATCCACCTGGTGACGACGTACGTGAA
CATGATGGCTCTTGTCGTGCCGGCTGTGATAAAGGAGTCCACCCCAAGCA
TGGTGAAAGATATGATGTGGAACCCCGTGGAGGCTCGTAAACGCGAGACG
AACGAGGAGCGGAGGGAGGAGCTGGACCAGATCATCAACCGTGTAAACAC
TCTGCGGGACCTGACGCTGAGGATCTTCACCGGAGCCACCGTGAAGGACA
CACTGCCCGCGAGTTTCTGGGATGTGGAGGGGAACGAGGAGTTGCGCGAG
TTCGCGGAAGAGGCTGGATCGCTCAAAAAGATGAACTTCCTCGGTGGTCT
TGAGTGCGGCAACAACCGTGAGGTGGTGACTGGGGAGTTGTTCACCGGAG
GGATTGTGACTGGGGGATACTCTGAAGCACCCAAAATAGACCGCGCAAGC
GGGGCCTGGCCTGGGAAGCTAAGGAACGTCATCGTGCAATTGACATGTGC
GTATCGATTGGGCCGCTCGAACAACCTCCTCGAGGCACATTACGCGCTAT
CTGAGGCGGAGATAGAGCTTGTAGTTGAGGGTCACCGTGAACACTGGGAT
ACCAACCTAAAATACGGTCTCCCATATCTTCACCTGACGGCATCGGTAGA
AACAACTGCCACCGATGCCGACCTTCAAGGAGAGAATTCGCACGCGTTGC
GTTTTGCTGTGAAGCGGTGTCGGGTTTTCAACCCCAGCATTGCACCCGTG
ACGGTAGTTGGGTGCGGGATTCGGGACTATGGAAAGTACGGGAGTCTTCA
ACGAGACTCGCAGGACACGAAGTACTTTAGTCACGCTCGATTTGGCAGTA
AACTCGTCCCTCCCCTGATGGGGAATGCTTCGTGTAGAAAACCGGTGGAA
GATGCTATTGAAGCATCGGGGAAGTTGTTTGATGTGGCGAGGAATGCTAG
AGCCAAGGCAGTTGCTGAAAAGAGCGGGGCCATGGGACCCGCGGCCAAAG
TGCGCCAGCAAAGGGTCGTTTTGTTGGAGCTAACGCCAGAGGAACGGGAG
AAAGTCATGGATATGTTCATGGCAGCTATCGCCAAGAATTGTTGCGGGCG
CCTGATGCTCGCCATCGAGAAGCATGACCCCCGTTTCGTAGAGTGGGGGA
AGAAGTGTCTGGCGAAGGCGGAATTAAAGTCTAGCCAGTATACGAGCAGG
GACAATTATGTTGAAAAGCCCGACGACGGCCGCTCCGAAGACCACCTGCT
GGGAAACACTTCCGCAGACATTGAGCGTGGGCAGCAGAGGGTGGCGCGCC
TCGTGACGAAGCTCGAGGCGGATGGTTTCAAGCCTAAAGACATCTCCGTC
TTCAGCGTGGCTCTGGCGCTGGCTTGCCTGTTCGCAGGAGCCTGTCTTCG
TCCCCAAGACTTTTTCAGGTGAGTGGTGACTGGGGAGTTGTTCACCGGAG
GGATTGTGACTGGGGGATACTCTGAAGCACCCAAAATAGACCGCGCAAGC
GGGGCCTGGCCTGGGAAGCTAAGGAACGTCATCGTGCAATTGACATGTGC
GTATCGATTGGGCCGCTCGAACAACCTCCTCGAGGCACATTACGCGCTAT
CTGAGGCGGAGATAGAGCTTGTAGTTGAGGGTCACCGTGAACACTGGGAT
ACCAACCTAAAATACGGTCTCCCATATCTTCACCTGACGGCATCGGTAGA
AACAACTGCCACCGATGCCGACCTTCAAGGAGAGAATTCGCACGCGTTGC
GTTTTGCTGTGAAGCGGTGTCGGGTTTTCAACCCCAGCATTGCACCCGTG
ACGGTAGTTGGGTGCGGGATTCGGGACTATGGAAAGTACGGGAGTCTTCA
ACGAGACTCGCAGGACACGAAGTACTTTAGTCACGCTCGATTTGGCAGTA
AACTCGTCCCTCCCCTGATGGGGAATGCTTCGTGTAGAAAACCGGTGGAA
GATGCTATTGAAGCATCGGGGAAGTTGTTTGATGTGGCGAGGAATGCTAG
AGCCAAGGCAGTTGCTGAAAAGAGCGGGGCCATGGGACCCGCGGCCAAAG
TGCGCCAGCAAAGGGTCGTTTTGTTGGAGCTAACGCCAGAGGAACGGGAG
AAAGTCATGGATATGTTCATGGCAGCTATCGCCAAGAATTGTTGCGGGCG
CCTGATGCTCGCCATCGAGAAGCATGACCCCCGTTTCGTAGAGTGGGGGA
AGAAGTGTCTGGCGAAGGCGGAATTAAAGTCTAGCCAGTATACGAGCAGG
GACAATTATGTTGAAAAGCCCGACGACGGCCGCTCCGAAGACCACCTGCT
GGGAAACACTTCCGCAGACATTGAGCGTGGGCAGCAGAGGGTGGCGCGCC
TCGTGACGAAGCTCGAGGCGGATGGTTTCAAGCCTAAAGACATCTCCGTC
TTCAGCGTGGCTCTGGCGCTGGCTTGCCTGTTCGCAGGAGCCTGTCTTCG
TCCCCAAGACTTTTTCAGGTGA
back to top