prot_L-elsbetiae_contig14310.3192.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14310.3192.1
Unique Nameprot_L-elsbetiae_contig14310.3192.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length137
Homology
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BLAST of mRNA_L-elsbetiae_contig14310.3192.1 vs. uniprot
Match: D7FT18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT18_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 9.150e-74
Identity = 111/136 (81.62%), Postives = 124/136 (91.18%), Query Frame = 0 
Query:    1 MEVQFLRESLVKAETAALDKKGELVLGRRTSRRQKRGMAQTYVVTWRDAETQKETTLPIAQYGLGRKAPRAKVARIMQYVKRQVDDLDVREGRWLTGIGVVCFVFGGLLLILRVAIGAIIPQPPSRKDLSRRQLFK 136
            +E QFLRESLVKAE A LDKKGELV G+R SRRQKRGMAQTY VTW+DAETQ ETTLPIA YGLGRK PRAKVARIMQYV+RQ+DDLDV+EGRW TGIG+VCFVFGG+L++LRV +G+I PQPPSR+DLSRRQLFK
Sbjct:   35 IEFQFLRESLVKAEVAHLDKKGELVRGKRASRRQKRGMAQTYTVTWKDAETQDETTLPIASYGLGRKVPRAKVARIMQYVQRQIDDLDVKEGRWFTGIGIVCFVFGGVLILLRVVVGSIFPQPPSRRDLSRRQLFK 170
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BLAST of mRNA_L-elsbetiae_contig14310.3192.1 vs. uniprot
Match: A0A6H5L4Y3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y3_9PHAE)

HSP 1 Score: 224 bits (570), Expect = 3.630e-72
Identity = 110/135 (81.48%), Postives = 122/135 (90.37%), Query Frame = 0 
Query:    2 EVQFLRESLVKAETAALDKKGELVLGRRTSRRQKRGMAQTYVVTWRDAETQKETTLPIAQYGLGRKAPRAKVARIMQYVKRQVDDLDVREGRWLTGIGVVCFVFGGLLLILRVAIGAIIPQPPSRKDLSRRQLFK 136
            E QFLRESLVKAE A LDK GELV G+R SRRQKRGMAQTY VTW+DAETQ ETTLPIA YGLGRK PRAKVARIMQYV+RQ+DDLDV+EGRW TGIG+VCFVFGG+L++LRV +G+I PQPPSR+DLSRRQLFK
Sbjct:   84 EFQFLRESLVKAEVAHLDKNGELVRGKRASRRQKRGMAQTYTVTWKDAETQDETTLPIASYGLGRKVPRAKVARIMQYVQRQIDDLDVKEGRWFTGIGIVCFVFGGVLILLRVVVGSIFPQPPSRRDLSRRQLFK 218
[Close]
BLAST of mRNA_L-elsbetiae_contig14310.3192.1 vs. uniprot
Match: A0A835YLB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLB3_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.050e-18
Identity = 46/116 (39.66%), Postives = 77/116 (66.38%), Query Frame = 0 
Query:    2 EVQFLRESLVKAETAALDKKGELVLGRRTSRRQKRGMAQTYVVTWRDAETQKETTLPIAQYGLGRKAPRAKVARIMQYVKRQVDDLDVREGRWLTGIGVVCFVFGGLLLILRVAIG 117
            E  F R +L+ AE   L + GE+V     SR+++R  A +Y + W DA+ Q     P++  GLGR+ PR++V  IM+Y+KR++ ++DV + R+ +G+G++C +FG LLL++R A+G
Sbjct:   61 ETAFPRVNLMSAELVRLYQ-GEIVDPTSLSRQKRRTTASSYAIKWLDAQRQTHMR-PMSSRGLGRQVPRSRVQEIMKYIKREIHEVDVSQARYTSGVGLICCIFGVLLLLMRAAVG 174
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14310.3192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FT18_ECTSI9.150e-7481.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4Y3_9PHAE3.630e-7281.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLB3_9STRA1.050e-1839.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 121..136
NoneNo IPR availableTMHMMTMhelixcoord: 94..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14310contigL-elsbetiae_contig14310:2833..3864 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14310.3192.1mRNA_L-elsbetiae_contig14310.3192.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14310 2067..3876 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14310.3192.1 ID=prot_L-elsbetiae_contig14310.3192.1|Name=mRNA_L-elsbetiae_contig14310.3192.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=137bp
MEVQFLRESLVKAETAALDKKGELVLGRRTSRRQKRGMAQTYVVTWRDAE
TQKETTLPIAQYGLGRKAPRAKVARIMQYVKRQVDDLDVREGRWLTGIGV
VCFVFGGLLLILRVAIGAIIPQPPSRKDLSRRQLFK*
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