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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 171 |
| Cds size | 168 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815571.6416895-CDS-L-elsbetiae_contig14307:528..611 | 1622815571.6416895-CDS-L-elsbetiae_contig14307:528..611 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14307 529..611 + |
| 1691682966.5619392-CDS-L-elsbetiae_contig14307:528..611 | 1691682966.5619392-CDS-L-elsbetiae_contig14307:528..611 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14307 529..611 + |
| 1622815571.6583486-CDS-L-elsbetiae_contig14307:3042..3127 | 1622815571.6583486-CDS-L-elsbetiae_contig14307:3042..3127 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14307 3043..3127 + |
| 1691682966.5802824-CDS-L-elsbetiae_contig14307:3042..3127 | 1691682966.5802824-CDS-L-elsbetiae_contig14307:3042..3127 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig14307 3043..3127 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14307.3191.1 >prot_L-elsbetiae_contig14307.3191.1 ID=prot_L-elsbetiae_contig14307.3191.1|Name=mRNA_L-elsbetiae_contig14307.3191.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=56bp
SFRGPGTAAYVSHGLEGAPARLLYPTTSAEVNAPPSRGATRLGIKQQGPP
RHRDEP back to topmRNA from alignment at L-elsbetiae_contig14307:529..3129+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig14307.3191.1 ID=mRNA_L-elsbetiae_contig14307.3191.1|Name=mRNA_L-elsbetiae_contig14307.3191.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2601bp|location=Sequence derived from alignment at L-elsbetiae_contig14307:529..3129+ (Laminarionema elsbetiae ELsaHSoW15)
TCCTTTCGTGGACCTGGCACAGCTGCCTACGTTTCACACGGCTTGGAAGG
CGCCCCCGCCAGGCTATTGTATCCTACCACGAGGTGAAACAAACGGCAAA
CTAGATTTAAACGACGAAATCAGGAGTTTTGTTCTATCGAGTGGCCATGT
TTATGCACCCGCTTCAGACTACGTTACCTTCGTTGCAGTAGGAGTTGCGT
ATATCGGGGGCGCCCTGCTACGGGGTGAAAAGTGACGTGGATTGGTAAGG
CGAGGTTGCGTGTCTCTTGCTCAAGGTTCGCGGGGATGTAAGGCGGAAGC
GAGATGTATCTGCTAGCTTCTAGTCAAACCGCGAGGCAAAAATGGAGGAC
AATTCAGACACTCAGGGCATATGAGGCCGGCCTGTGCGGTAGGTATAACG
TCGCCACGAGCCCTCTCGTGTCCTCGCCTTTTCCCCTAAGAAGTGGTGCT
GACGGCTTTGGGGCAGAGCTGTAGATAGGGCCTTCTTCCACTTTCACGTT
CCAGTGTAGTTGGGATCATCATGGACGGAACTCCCTGCCTCGCCCTCTGT
TTGGTGCTAGTAACGATTCGTCGCGGACTGGAAAGCCTGTCAAGGATGTA
CCTTTTCTTTAGGCGTTCGAAATCCGGGATAATTGGGGGGAGAAATCACA
GGAGAGGACCTGAACCGACACTTGGTATTGTTTTTCTCTCATCTTCCTCG
TAGATCTCTCTCCACTGTCCTTTCGCACCCAAAAATCGACGGTTTCGTTT
TTGAACGAGGCCGGTTTCCAAGACGACCGAGCCAGTACGTGGGTCGGCTG
CCTTCAGGTAGCTGTTGCTAACAGAGCAGCGAGGAATATGCGAGGGGCGC
CAAGGGCAGAGCTCAAGTGTGCACCGAAAAACATCATTCTCGTGTGTCGG
CAAAAGTCAGCTCACACACGCATGCATGGGTAGACAGCAGCGAGGGGTCG
GTCATGGAGGGCTCGGGGTCTTTGGAGACGGAGTCTTCGGCTTAGCGCCT
CTTATCAGAACCCTGAAGGAACATAGTTGTTGGAGCACAGGAACATCTGT
GCACACGGTGATGTTCGATGTAGAGACCTAGGTGTGTTCAAAACTGTCTT
CAAAAAATGCCCTATTCTCTCTCGATCTGGTCGGGTTTTGCTTCACGCAA
AACGTACACGCCGTGTACACCAGCGACAACAGCAGACACGCGAAGATATC
CAAGAACATCCCCTTCAAGATAAAAGTGTACAAGAGTCTCCGGACGTGGG
GAGCCTATCGGCCCCTCCGTCCTCCGGGTTACTGTGAAAGGGATGAGGTG
TTGGTGCCGGGGTAGGCTGAATACCAAGGGCGGGAGTATTGTATTTGATC
GGAAAGACATTGATAATAAAATATGAGTTTTTTTCGTAGGTGTGTCGCAT
ATTCTGGCGCAAGGCAAAGAAAGGGCACACATGTGTACACAATATCTACA
AACTTCGCCACGCTGCAAAAACATATCGCCGTGCGAAAAAAGTCCCCGGC
GCAAAACTTTTTCCGGCTCACTGTAGAGTGGGTTAGTTACACGCACACAA
TTTCTGTGACACGTCGGAAATTCGGGCATGCGCTGTACATGCGCTGTACA
TGGGCACACAGCAAGCCTTTTGCTGAAATATTTGAAATTTCAGAATATGC
AGACAAACCAAAAAATGCCCGAGCCGGAGAAAACTTCTACTTCTTGCAGG
TTTGTTTGAAGCCGGGTGACGTCGCCCTCTGACTTGCGTTTCAGAGGCGA
AGCCTTCAATAGCACACTCATGTGTTTCAGAGGCGAAGCCTTCGATAACG
CACTCATGTCTAGCCGGGGGTTTTAGATCCTGTGTGCGTGGTGTCGAAGC
AAAGACAGATGTGGGATTTTTCTGGCAGTTTATCAAATAAAGATCCAGAA
CCTGCAAAACGGGACTGTGACACTGTGACCCGTTTGACGTTGGTTTGCAC
AGCTTTGAACCTGCTTTGACGACACACGCAGCCCGCGTCCAATCGGGATC
GCGCGGATGGGTCATTCTGTTCGCTACGCCACCAGGTGCCACCGTGCGAA
GGCACGAGTCTCGCCATGCGTCTGGGCGCGCGCTATGAGGGCACGACGTT
AATATGCTGTTTACAGAGAGGGTCGAATCAAGCCGCTGCGCTCTCAGCGA
CCTAGTCCTAAAGATCCCGATTTCTGTAATATTAGTTACCTCTATGTATG
TAGTCAAGACAGTCGAACCGGCTGCCCCCCCCGCCAGATATTACGATGCC
GAGCACATATCCTTTTTGTACTGATTTCAAAGAAAATATACTTAGAACCA
GTATTCCTTCCTCGCTACTTCAAGTGCGTGGTACAACCTTCAACATACCC
CCGTTATCTGCAGCTCGACGTGCTCGTTTTAACCCTTCTATCCCCCGTCC
GTCCGTGCCTGACTGCTTTTTGATTTGGCCCCCCGCCGAAAAATTAATCT
TTTTGTTTGCCCCTTCCTCTGCACCTGCTTCGCTGCCTGCTCCTCTGATC
ACGTGCGCTTTTAGCGCAGAGGTCAACGCGCCTCCTTCCCGAGGGGCGAC
GCGACTGGGAATAAAACAACAAGGGCCGCCTCGCCACCGAGATGAGCCAA
G back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig14307:529..3129+ >mRNA_L-elsbetiae_contig14307.3191.1 ID=mRNA_L-elsbetiae_contig14307.3191.1|Name=mRNA_L-elsbetiae_contig14307.3191.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=336bp|location=Sequence derived from alignment at L-elsbetiae_contig14307:529..3129+ (Laminarionema elsbetiae ELsaHSoW15)
TCCTTTCGTGGACCTGGCACAGCTGCCTACGTTTCACACGGCTTGGAAGG
CGCCCCCGCCAGGCTATTGTATCCTACCACGAGTCCTTTCGTGGACCTGG
CACAGCTGCCTACGTTTCACACGGCTTGGAAGGCGCCCCCGCCAGGCTAT
TGTATCCTACCACGAGCGCAGAGGTCAACGCGCCTCCTTCCCGAGGGGCG
ACGCGACTGGGAATAAAACAACAAGGGCCGCCTCGCCACCGAGATGAGCC
ACGCAGAGGTCAACGCGCCTCCTTCCCGAGGGGCGACGCGACTGGGAATA
AAACAACAAGGGCCGCCTCGCCACCGAGATGAGCCA back to top
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