prot_L-elsbetiae_contig14286.3179.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14286.3179.1
Unique Nameprot_L-elsbetiae_contig14286.3179.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length125
Homology
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: D7G5V3_ECTSI (GTPase activating protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V3_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 2.640e-78
Identity = 113/124 (91.13%), Postives = 120/124 (96.77%), Query Frame = 0
Query:    1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 124
            +VQYCQG+NYI SLFLLYMPEENAFWMLVA+M R CAPLRELFLPGM+KAQEFQFVMDSLT KHC+KLSNQILA+NLTP+MYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK
Sbjct:  124 EVQYCQGVNYITSLFLLYMPEENAFWMLVATMNRPCAPLRELFLPGMLKAQEFQFVMDSLTKKHCEKLSNQILAHNLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 247          
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: A0A6H5L2H2_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H2_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 6.690e-75
Identity = 115/124 (92.74%), Postives = 120/124 (96.77%), Query Frame = 0
Query:    1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 124
            +VQYCQGINYI SLFLLYMPEENAFWMLVASM R CAPLRELFLPGM+KAQEFQFVMDSLT KHC+KLSNQILA+NLTP+MYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK
Sbjct:  477 EVQYCQGINYITSLFLLYMPEENAFWMLVASMNRPCAPLRELFLPGMLKAQEFQFVMDSLTKKHCEKLSNQILAHNLTPAMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 600          
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: A0A835YV67_9STRA (Rab-GTPase-TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV67_9STRA)

HSP 1 Score: 166 bits (421), Expect = 5.850e-46
Identity = 79/118 (66.95%), Postives = 91/118 (77.12%), Query Frame = 0
Query:    7 GINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 124
            GINYI +LFLLYMPEE AFWMLV  M R  APLRELFLPGM+KA+EF  VMDSLT K   KL   +  +++ P+MYA  WF+T FTQ FPY+L TR WD+FL EDWK+ YRVCLALFK
Sbjct:  466 GINYIAALFLLYMPEEEAFWMLVCVMHRPQAPLRELFLPGMLKAREFNHVMDSLTEKFVPKLFRHLQKHDIQPTMYAHPWFITCFTQAFPYELCTRTWDVFLEEDWKIMYRVCLALFK 583          
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: A0A7S2KF21_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KF21_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.470e-35
Identity = 66/124 (53.23%), Postives = 79/124 (63.71%), Query Frame = 0
Query:    1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 124
            +V YCQG+ +I  +FL YMPEE AFW LV  M      LR+LF  GM  AQ+  +V D LT K   KL+      N+  SM+ATQW +T +T  FP+DLVTRVWD FL E WKV YRV LAL K
Sbjct:  206 EVGYCQGMGFIAGMFLTYMPEEQAFWQLVGVMNEEPCNLRDLFSVGMAGAQQVLYVADKLTRKVLPKLAKHFDRENVHISMFATQWLVTIYTSNFPFDLVTRVWDCFLYEGWKVVYRVMLALLK 329          
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: A0A225W6Z9_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W6Z9_9STRA)

HSP 1 Score: 130 bits (326), Expect = 5.800e-34
Identity = 61/124 (49.19%), Postives = 81/124 (65.32%), Query Frame = 0
Query:    1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 124
            +V YCQG+ ++ ++FL YMPE+ AFW+LVA +      L +L+ P M K  E  FV + L  ++  +LS  + +  L P+MY TQWFLT FT  FP++ VTRVWD FL E WKV YRV LAL K
Sbjct:  197 EVGYCQGMGFLSAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFVFEGLFKQYMPQLSAHLESEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDAFLHEGWKVIYRVALALLK 320          
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: A0A0P1B616_PLAHL (Plant adhesion molecule 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B616_PLAHL)

HSP 1 Score: 130 bits (326), Expect = 6.020e-34
Identity = 63/124 (50.81%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 124
            +V YCQG+ +I ++FL YMPE+ AFW+LVA +      L +L+ P M K  E  +V   L  +    LS  +    L P+MY TQWFLT FT  FP+DLVTRVWD FL E WKV YRV LAL K
Sbjct:  184 EVGYCQGMGFISAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVLEVTYVFQGLLKQQMPHLSTHLENEGLHPTMYLTQWFLTLFTYNFPFDLVTRVWDAFLHEGWKVIYRVALALMK 307          
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: A0A8J5IBD6_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IBD6_9STRA)

HSP 1 Score: 127 bits (318), Expect = 4.590e-33
Identity = 61/124 (49.19%), Postives = 79/124 (63.71%), Query Frame = 0
Query:    1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 124
            +V YCQG+ ++ ++FL YMPE+ AFW+LVA +      L +L+ P M K  E  FV + L  +   +LS  +    L P+MY TQWFLT FT  FP++ VTRVWD FL E WKV YRV LAL K
Sbjct:  148 EVGYCQGMGFLSAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFVFEGLFKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDTFLHEGWKVIYRVALALMK 271          
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: A0A7S1G1I4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G1I4_9STRA)

HSP 1 Score: 128 bits (322), Expect = 7.400e-33
Identity = 59/121 (48.76%), Postives = 82/121 (67.77%), Query Frame = 0
Query:    4 YCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 124
            YCQG+N++ ++FL+YM EE+AFWMLV  M      LREL+  GM+K+Q   +V   L   +  KL+      N+  +M+ATQWFLT ++  F +DLVTR+WD+FL+E WK+ YRV LAL K
Sbjct:  252 YCQGMNFVTAMFLMYMSEEDAFWMLVHVMNFEPCKLRELYTVGMIKSQRVLYVGSQLIKHYLPKLNRHFETENICYNMFATQWFLTIYSNSFSFDLVTRIWDIFLVEGWKIVYRVMLALLK 372          
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: H3GE06_PHYRM (Rab-GAP TBC domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=H3GE06_PHYRM)

HSP 1 Score: 127 bits (318), Expect = 8.120e-33
Identity = 61/124 (49.19%), Postives = 79/124 (63.71%), Query Frame = 0
Query:    1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 124
            +V YCQG+ ++ ++FL YMPE+ AFW+LVA +      L +L+ P M K  E  FV  +L  +   +LS  +    L P+MY TQWFLT FT  FP++ VTRVWD FL E WKV YRV LAL K
Sbjct:  197 EVGYCQGMGFLSAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFVFQALLKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDSFLHEGWKVIYRVALALLK 320          
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Match: D0MU62_PHYIT (Rab-GAP TBC domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0MU62_PHYIT)

HSP 1 Score: 126 bits (317), Expect = 1.430e-32
Identity = 60/124 (48.39%), Postives = 79/124 (63.71%), Query Frame = 0
Query:    1 QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKAQEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLVTRVWDMFLLEDWKVFYRVCLALFK 124
            +V YCQG+ ++ ++FL YMPE+ AFW+LVA +      L +L+ P M K  E  F+ + L  +   +LS  +    L P+MY TQWFLT FT  FP++ VTRVWD FL E WKV YRV LAL K
Sbjct:  201 EVGYCQGMGFLTAMFLCYMPEQQAFWLLVACLNHKRYGLADLYRPRMPKVPEVTFIFEGLFKQLMPQLSAHLENEGLHPTMYLTQWFLTLFTYNFPFEFVTRVWDAFLHEGWKVIYRVALALMK 324          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14286.3179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5V3_ECTSI2.640e-7891.13GTPase activating protein n=1 Tax=Ectocarpus silic... [more]
A0A6H5L2H2_9PHAE6.690e-7592.74Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A835YV67_9STRA5.850e-4666.95Rab-GTPase-TBC domain-containing protein n=1 Tax=T... [more]
A0A7S2KF21_9STRA4.470e-3553.23Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A225W6Z9_9STRA5.800e-3449.19Rab-GAP TBC domain-containing protein n=1 Tax=Phyt... [more]
A0A0P1B616_PLAHL6.020e-3450.81Plant adhesion molecule 1 n=1 Tax=Plasmopara halst... [more]
A0A8J5IBD6_9STRA4.590e-3349.19Rab-GAP TBC domain-containing protein n=1 Tax=Phyt... [more]
A0A7S1G1I4_9STRA7.400e-3348.76Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
H3GE06_PHYRM8.120e-3349.19Rab-GAP TBC domain-containing protein n=6 Tax=Phyt... [more]
D0MU62_PHYIT1.430e-3248.39Rab-GAP TBC domain-containing protein n=10 Tax=Phy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 1..124
e-value: 2.2E-32
score: 112.4
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..111
score: 20.135
NoneNo IPR availableGENE3D1.10.8.270coord: 1..38
e-value: 3.8E-10
score: 41.5
NoneNo IPR availableGENE3D1.10.472.80coord: 39..124
e-value: 4.8E-28
score: 99.8
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 2..124
NoneNo IPR availablePANTHERPTHR22957:SF491coord: 2..124
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 47..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14286contigL-elsbetiae_contig14286:3054..4057 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14286.3179.1mRNA_L-elsbetiae_contig14286.3179.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14286 3054..4057 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14286.3179.1 ID=prot_L-elsbetiae_contig14286.3179.1|Name=mRNA_L-elsbetiae_contig14286.3179.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp
QVQYCQGINYICSLFLLYMPEENAFWMLVASMTRSCAPLRELFLPGMMKA
QEFQFVMDSLTMKHCKKLSNQILANNLTPSMYATQWFLTAFTQRFPYDLV
TRVWDMFLLEDWKVFYRVCLALFK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf