prot_L-elsbetiae_contig14276.3173.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14276.3173.1
Unique Nameprot_L-elsbetiae_contig14276.3173.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length170
Homology
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: D7FX43_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX43_ECTSI)

HSP 1 Score: 308 bits (789), Expect = 9.780e-100
Identity = 164/226 (72.57%), Postives = 166/226 (73.45%), Query Frame = 0
Query:    1 MLDAKQGDTICLGADGQGCGTVV-------------HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGK-------------------------------------------DANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTEELSRMFDRRRQQQ 170
            M DAKQGDTICLG DGQGCGTVV             HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGK                                           DANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQK AVICACIIAAYRE+GTEEL+RMFD RRQQQ
Sbjct:  105 MQDAKQGDTICLGTDGQGCGTVVQDHKARRRGGGGVHEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGKARLSRSRYFLMRCAFFRQAGWLPLCRPAVLGGGGVAPFSWRGHDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKFAVICACIIAAYREVGTEELTRMFDLRRQQQ 330          
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: A0A835ZF02_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF02_9STRA)

HSP 1 Score: 230 bits (587), Expect = 4.570e-70
Identity = 114/173 (65.90%), Postives = 137/173 (79.19%), Query Frame = 0
Query:    1 MLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISEGK-DANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTEELSRMFDRRR 167
            +LDAKQGDTIC+G  G GCG VV     HEG+MYR+FEGE DRSHHG  P++LYSTA+NMRT IS+G  D+ RL NL+  VEM LS +GKD+++TR  YKD+MK++AFD+I+H+A NCDLH TVT RAKELFAGWRNVKEHVH K+AVICACI+AAYR I  +E      RRR
Sbjct:   63 VLDAKQGDTICMGVGGAGCGAVVEDHKAHEGNMYRQFEGEVDRSHHGLPPDKLYSTAYNMRTQISKGALDSARLANLSSYVEMNLSQMGKDDKRTRVGYKDQMKKQAFDVIDHMAANCDLHGTVTERAKELFAGWRNVKEHVHHKNAVICACIVAAYRTIAADEYRAREARRR 235          
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: A0A024GKS6_9STRA (C2H2-type domain-containing protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GKS6_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.000e-55
Identity = 97/163 (59.51%), Postives = 120/163 (73.62%), Query Frame = 0
Query:    1 MLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTE 157
            + D  +GDTIC G DG GCGTVV     HEGS YRKFEGE D+SHHGPAPN+L+ST+HN+RT IS+ G+ A  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+V+EHVHQ  A++  C+IAAY   G E
Sbjct:  137 ITDYARGDTICNGPDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTSHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTVSNLDLHEIVGNRAKKMFAEFRDVREHVHQFEAMVAGCVIAAYIATGRE 299          
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: W2RG83_PHYPN (C2H2-type domain-containing protein n=38 Tax=Peronosporaceae TaxID=4777 RepID=W2RG83_PHYPN)

HSP 1 Score: 192 bits (487), Expect = 1.260e-55
Identity = 98/166 (59.04%), Postives = 120/166 (72.29%), Query Frame = 0
Query:    1 MLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTEELS 160
            + D  +GDTIC G DG GCGTVV     HEGS YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ G+ A  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+V+EHVHQ  A++  C+IAAY E   E  S
Sbjct:  183 ITDYARGDTICNGVDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKEMYS 348          
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: A0A8K1FG42_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG42_PYTOL)

HSP 1 Score: 191 bits (484), Expect = 1.810e-55
Identity = 96/163 (58.90%), Postives = 121/163 (74.23%), Query Frame = 0
Query:    1 MLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTE 157
            + D  +GDTIC G DG+GCGTVV     HEGS YRKFEGE D+SHHGPAPN+L+S++HN+RT IS+ G+ A  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+++EHVHQ  AV+  C+IAAY E   E
Sbjct:  145 ITDYARGDTICNGLDGRGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSSSHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKASRLIDHTISNLDLHEIVGNRAKKMFADFRDLREHVHQFEAVVAGCVIAAYMETAKE 307          
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: A0A1V9ZD07_9STRA (C2H2-type domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZD07_9STRA)

HSP 1 Score: 190 bits (482), Expect = 2.160e-55
Identity = 96/166 (57.83%), Postives = 119/166 (71.69%), Query Frame = 0
Query:    1 MLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTEELS 160
            + D  +GDTIC GADG GCG VV     HEG+ YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ G+ +  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+++EHVHQ  AV+  CII AY   G E  S
Sbjct:  112 ITDYARGDTICTGADGHGCGNVVQDHIVHEGNAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKAIRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYLTTGKEMYS 277          
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: K3X3Y0_GLOUD (C2H2-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3Y0_GLOUD)

HSP 1 Score: 189 bits (481), Expect = 6.530e-55
Identity = 95/163 (58.28%), Postives = 120/163 (73.62%), Query Frame = 0
Query:    1 MLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTE 157
            + D  +GDTIC G DG GCGTVV     HEGS YRKFEGE D+SHHGPAPN+L+S+ HN+RT IS+ G+ A  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+V+EHVHQ  A++  C+IA+Y + G E
Sbjct:  154 ITDYARGDTICNGLDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSSGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIASYMDTGKE 316          
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: T0QRB4_SAPDV (C2H2-type domain-containing protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0QRB4_SAPDV)

HSP 1 Score: 188 bits (478), Expect = 9.800e-55
Identity = 95/163 (58.28%), Postives = 118/163 (72.39%), Query Frame = 0
Query:    1 MLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTE 157
            + D  +GDTIC G DG+GCG VV     HEGS YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ G+ +  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+++EHVHQ  AV+  CII AY   G E
Sbjct:  120 ITDYARGDTICTGPDGRGCGNVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTMISQDGEQSANLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTGANLDLHEIVCNRAKKMFAEFRDLREHVHQFEAVVAGCIIDAYLTTGKE 282          
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: A0A0W8C063_PHYNI (C2H2-type domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C063_PHYNI)

HSP 1 Score: 192 bits (487), Expect = 1.010e-54
Identity = 98/166 (59.04%), Postives = 120/166 (72.29%), Query Frame = 0
Query:    1 MLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTEELS 160
            + D  +GDTIC G DG GCGTVV     HEGS YRKFEGE D+SHHGPAPN+L+ST HN+RT IS+ G+ A  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+V+EHVHQ  A++  C+IAAY E   E  S
Sbjct:  307 ITDYARGDTICNGVDGNGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSTGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGSRAKKMFAEFRDVREHVHQFDAMVAGCVIAAYMETSKEMYS 472          
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Match: A0A2D4C348_PYTIN (C2H2-type domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C348_PYTIN)

HSP 1 Score: 189 bits (479), Expect = 1.240e-54
Identity = 95/163 (58.28%), Postives = 120/163 (73.62%), Query Frame = 0
Query:    1 MLDAKQGDTICLGADGQGCGTVV-----HEGSMYRKFEGEADRSHHGPAPNRLYSTAHNMRTWISE-GKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAAYREIGTE 157
            + D  +GDTIC G DG+GCGTVV     HEGS YRKFEGE D+SHHGPAPN+L+S+ HN+RT IS+ G+ A  LR  AE VEM LS +GKDER+TR  YKD+MK++A  LI+H   N DLHE V  RAK++FA +R+V+EHVHQ  A++  C+IAAY +   E
Sbjct:  153 ITDYARGDTICNGIDGRGCGTVVQDHIVHEGSAYRKFEGEEDKSHHGPAPNKLFSSGHNLRTLISQDGEMAGNLRRAAEFVEMNLSQMGKDERRTRIGYKDQMKQKACRLIDHTISNLDLHEIVGNRAKKMFAEFRDVREHVHQFEAMVAGCVIAAYMDTAKE 315          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14276.3173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX43_ECTSI9.780e-10072.57C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A835ZF02_9STRA4.570e-7065.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A024GKS6_9STRA1.000e-5559.51C2H2-type domain-containing protein n=3 Tax=Albugo... [more]
W2RG83_PHYPN1.260e-5559.04C2H2-type domain-containing protein n=38 Tax=Peron... [more]
A0A8K1FG42_PYTOL1.810e-5558.90Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9ZD07_9STRA2.160e-5557.83C2H2-type domain-containing protein n=1 Tax=Thraus... [more]
K3X3Y0_GLOUD6.530e-5558.28C2H2-type domain-containing protein n=1 Tax=Globis... [more]
T0QRB4_SAPDV9.800e-5558.28C2H2-type domain-containing protein n=2 Tax=Saprol... [more]
A0A0W8C063_PHYNI1.010e-5459.04C2H2-type domain-containing protein n=10 Tax=Phyto... [more]
A0A2D4C348_PYTIN1.240e-5458.28C2H2-type domain-containing protein n=1 Tax=Pythiu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.170coord: 1..165
e-value: 5.0E-11
score: 44.8
NoneNo IPR availablePANTHERPTHR11618:SF13TRANSCRIPTION INITIATION FACTOR IIBcoord: 3..154
IPR000812Transcription factor TFIIBPANTHERPTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDcoord: 3..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14276contigL-elsbetiae_contig14276:136..4166 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14276.3173.1mRNA_L-elsbetiae_contig14276.3173.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14276 118..4166 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14276.3173.1 ID=prot_L-elsbetiae_contig14276.3173.1|Name=mRNA_L-elsbetiae_contig14276.3173.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=170bp
MLDAKQGDTICLGADGQGCGTVVHEGSMYRKFEGEADRSHHGPAPNRLYS
TAHNMRTWISEGKDANRLRNLAEDVEMGLSTVGKDERKTRTAYKDKMKRE
AFDLINHIAGNCDLHETVTVRAKELFAGWRNVKEHVHQKHAVICACIIAA
YREIGTEELSRMFDRRRQQQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000812TFIIB