mRNA_L-elsbetiae_contig14273.3171.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14273.3171.1
Unique NamemRNA_L-elsbetiae_contig14273.3171.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig14273.3171.1 vs. uniprot
Match: UPI0000161E54 (EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E54)

HSP 1 Score: 748 bits (1932), Expect = 4.670e-264
Identity = 378/548 (68.98%), Postives = 438/548 (79.93%), Query Frame = 1
Query:    1 MVQPSPDGTPRKKKKRKTATRESSPKTVPDFLQTVGILYPTKYLPASGKLPRAYKGTFCCRLFSKVRFGEQVSQLLRTRTVNVGFQSATTCENRDTFQKKVDEAIDHFSRERVLASLFANFLFMERLRDGSIIPEPDEKFYNSCLSSCIKS-AGGSLNEDFDRFSALTGLARLVPPKKLNLSQIRRYEAISMATSASTRAQHHTEKRRIVITRWFLRGLVSRGDLVYKKYATKLYNLAKKIIVEFDGTIEKEQELRENALEVDPDTDIASIIEFAGKEREFSIRVSGDDTCAPTIKHLNWMFKTYVAVSRRRYEEVVSQSHAFSPGEDKASRKQRDEFVKNHLGEENSCAPPRDTAVLPICSSGSVFIRIDAKTLKSWGLCHSDDAWWYNDVLQPFSKAANIKCLKSGENAKYASNQQGYLSSLLESGPAKCPWMVG*SFLTDGVQIKMFLLTLGHTRKPFSGSSELNDAGYNKLPRADAPLENLLRVGRGVYNIKSLTESTRLPGDLVVMSADPGQAKVINVCSATCEEWASRDPKVILRTSTCVSG 1641
            MV+PS DG   KKKK K     + PK +P FLQTV  LYP +YL ASG LP++ KGT+CC+LFS+VRFG++VSQ LRTRTV+VGF++ATT E RDTFQ KV++A+DH SRERVLASLFANF+FMERL++GS +PEPD  F+ SCLSSCI S  GGSLN DFDRFS +TGL RLVPPK +NL Q R +EA  MAT+ STRA HH EKRRI ITRWFLRG +SRGDL  KKYATKLYNLA+KII  FDGT E  Q+LR  +  +DP TD   II+FA +E+EFS R  GD   A TIKHLNWMF TYVA SRR YEE VS+SH F+PG+DKA RK+RDEF+K+ LGEE + APP+DTAVLPICS+G+VFI ID KTL SWGL HS+DAWWY DVL+PFSK AN+KCL + ENA+YAS++ GYLSSLLESGP KCPWM+G SFLTDGVQIK+ L TL H RK FSGSSELN+ GYNKLPRAD  LE+LL  GRGVYNI SL +ST +  D+VVMSADPGQAKVINV SAT   WA +DP VIL+TSTCV G
Sbjct:    1 MVRPSSDGNSHKKKKHKKIPPRAPPKNIPGFLQTVASLYPNQYLTASGNLPKSCKGTYCCQLFSRVRFGKEVSQQLRTRTVSVGFRAATTDEKRDTFQSKVNDAVDHLSRERVLASLFANFVFMERLQNGSALPEPDRAFFKSCLSSCILSRGGGSLNADFDRFSEITGLTRLVPPKSMNLDQQREHEAQRMATATSTRATHHAEKRRISITRWFLRGRISRGDLDCKKYATKLYNLAEKIITNFDGTPEDTQKLRTMSRAIDPGTDTNIIIDFAWQEKEFSDRDRGDGKSAETIKHLNWMFNTYVAESRRMYEEAVSRSHLFAPGKDKACRKKRDEFMKHELGEEFTYAPPKDTAVLPICSTGAVFIYIDMKTLGSWGLLHSNDAWWYKDVLRPFSKEANVKCLVNKENARYASSEHGYLSSLLESGPDKCPWMIGESFLTDGVQIKLLLKTLEHGRKAFSGSSELNEKGYNKLPRADVQLESLLGEGRGVYNISSLLKSTSIREDVVVMSADPGQAKVINVSSATARTWAKQDPGVILKTSTCVFG 548          
BLAST of mRNA_L-elsbetiae_contig14273.3171.1 vs. uniprot
Match: Q6XLT6_9PHYC (FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT6_9PHYC)

HSP 1 Score: 709 bits (1831), Expect = 1.310e-248
Identity = 354/527 (67.17%), Postives = 422/527 (80.08%), Query Frame = 1
Query:   61 RESSPKTVPDFLQTVGILYPTKYLPASGKLPRAYKGTFCCRLFSKVRFGEQVSQLLRTRTVNVGFQSATTCENRDTFQKKVDEAIDHFSRERVLASLFANFLFMERLRDGSIIPEPDEKFYNSCLSSCIKSAGGSLNEDFDRFSALTGLARLVPPKKLNLSQIRRYEAISMATSASTRAQHHTEKRRIVITRWFLRGLVSRGDLVYKKYATKLYNLAKKIIVEFDGTIEKEQELRENALEVDPDTDIASIIEFAGKEREFSIRVSGDDTCAPTIKHLNWMFKTYVAVSRRRYEEVVSQSHAFSPGEDKASRKQRDEFVKNHLGEENSCAPPRDTAVLPICSSGSVFIRIDAKTLKSWGLCHSDDAWWYNDVLQPFSKAANIKCLKSGENAKYASNQQGYLSSLLESGPAKCPWMVG*SFLTDGVQIKMFLLTLGHTRKPFSGSSELNDAGYNKLPRADAPLENLLRVGRGVYNIKSLTESTRLPGDLVVMSADPGQAKVINVCSATCEEWASRDPKVILRTSTCVSG 1641
            R S+    P FL+TVG LYP + L ASG LPR YKG++C +LFS+VRFG  VSQ LR RTV+VGF +AT    R+TFQ KV+EA+DH SRERVLASLF+NF++MERLRDGS +PEPD KF+ SCLSSCI+S GGSLN DFDRFS+LTGL+RLVPPK LNL Q R++EA  MATS STRA HH+EKRRI ITRWFL   +S G+   K YATKL+ LAKKII +F+GT E++Q+LRE A  +D   D   IIEFA KE+EFS   S +  CAPTI HL+WMFKTYV+ SRR+YEEV+S++H+  PGE+K   K+R+EF+K  LG  +  APPRDT+VLPICS+GSVFI +D KTLKSWGL HS+DAWWY +VL+PFS+ ANIKCL+S EN +YAS++QGYLSSLL++GPAKCPW VG SFLTDGVQIK+ L+TL HTR+ FSGSS+LN+ GY+KLPRADAPLE LL  GRGVYNI SL ES  + GDLVVMSADPGQAKVINVCSAT E W  +DP  IL+TSTCV G
Sbjct:   31 RMSNQNKKPPFLETVGKLYPQQCLTASGNLPRKYKGSYCAQLFSRVRFGNAVSQKLRRRTVSVGFLAATMDSTRETFQSKVNEAVDHLSRERVLASLFSNFVYMERLRDGSTLPEPDVKFFGSCLSSCIRSKGGSLNADFDRFSSLTGLSRLVPPKHLNLGQQRQFEANQMATSTSTRATHHSEKRRISITRWFLWERISGGNSRPKDYATKLFILAKKIITDFEGTEEQKQKLREMAKALDSGMDPEPIIEFALKEKEFSDNFSANQKCAPTIAHLDWMFKTYVSESRRKYEEVLSRAHSLFPGEEKEISKKRNEFMKRELGRGDIIAPPRDTSVLPICSTGSVFIHVDMKTLKSWGLFHSNDAWWYKNVLRPFSREANIKCLRSRENTRYASSEQGYLSSLLDNGPAKCPWFVGESFLTDGVQIKLLLVTLEHTRESFSGSSQLNEEGYSKLPRADAPLETLLEKGRGVYNISSLVESESIRGDLVVMSADPGQAKVINVCSATSETWEKKDPVAILKTSTCVFG 557          
BLAST of mRNA_L-elsbetiae_contig14273.3171.1 vs. uniprot
Match: UPI0000161E53 (EsV-1-178/222 paralog 1 n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E53)

HSP 1 Score: 585 bits (1509), Expect = 1.070e-202
Identity = 296/425 (69.65%), Postives = 338/425 (79.53%), Query Frame = 1
Query:  370 MERLRDGSIIPEPDEKFYNSCLSSCIKS-AGGSLNEDFDRFSALTGLARLVPPKKLNLSQIRRYEAISMATSASTRAQHHTEKRRIVITRWFLRGLVSRGDLVYKKYATKLYNLAKKIIVEFDGTIEKEQELRENALEVDPDTDIASIIEFAGKEREFSIRVSGDDTCAPTIKHLNWMFKTYVAVSRRRYEEVVSQSHAFSPGEDKASRKQRDEFVKNHLGEENSCAPPRDTAVLPICSSGSVFIRIDAKTLKSWGLCHSDDAWWYNDVLQPFSKAANIKCLKSGENAKYASNQQGYLSSLLESGPAKCPWMVG*SFLTDGVQIKMFLLTLGHTRKPFSGSSELNDAGYNKLPRADAPLENLLRVGRGVYNIKSLTESTRLPGDLVVMSADPGQAKVINVCSATCEEWASRDPKVILRTSTCVSG 1641
            MERL++GS +PEPD  F+ SCLSSCI S  GGSLN DFDRFS +TGL RLVPPK +NL Q R +EA  MAT+ STRA HH EKRRI ITRWFLRG +SRGDL  KKYATKLYNLA+KII  FDGT E  Q+LR  +  +DP TD   II+FA +E++FS R  GD   A TIKHLNWMF TYVA SRR YEE VS+SH F+PG+DKA RK+RDEFVK+ LGEE + APP+DTAVLPICS+G+VFI ID KTL SWGL HS+DAWWY DVL+PFSK AN+KCL + ENA+YAS++ GYLSSLLESGP KCPWM+G SFLTDGVQIK+ L TL H RK FSGSSELN+ GYNKLPRAD  LE+LL  GRGVYNI SL +ST +  D+VVMSADPGQAKVINV SA    WA +DP VIL+TSTCV G
Sbjct:    1 MERLQNGSALPEPDRAFFKSCLSSCILSRGGGSLNADFDRFSEITGLTRLVPPKSMNLDQQREHEAQRMATATSTRATHHAEKRRISITRWFLRGRISRGDLDCKKYATKLYNLAEKIITNFDGTPEDTQKLRTMSRAIDPGTDTNIIIDFAWQEKKFSDRDRGDGKSAETIKHLNWMFNTYVAESRRMYEEAVSRSHLFAPGKDKACRKKRDEFVKHELGEEFTYAPPKDTAVLPICSTGAVFIYIDMKTLGSWGLLHSNDAWWYKDVLRPFSKEANVKCLVNKENARYASSEHGYLSSLLESGPDKCPWMIGESFLTDGVQIKLLLKTLEHGRKAFSGSSELNEEGYNKLPRADVQLESLLGEGRGVYNISSLLKSTSIREDVVVMSADPGQAKVINVSSAMARTWAKQDPGVILKTSTCVFG 425          
BLAST of mRNA_L-elsbetiae_contig14273.3171.1 vs. uniprot
Match: A0A6H5K772_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE)

HSP 1 Score: 410 bits (1055), Expect = 6.750e-132
Identity = 204/284 (71.83%), Postives = 235/284 (82.75%), Query Frame = 1
Query:  790 DTDIASIIEFAGKEREFSIRVSGDDTCAPTIKHLNWMFKTYVAVSRRRYEEVVSQSHAFSPGEDKASRKQRDEFVKNHLGEENSCAPPRDTAVLPICSSGSVFIRIDAKTLKSWGLCHSDDAWWYNDVLQPFSKAANIKCLKSGENAKYASNQQGYLSSLLESGPAKCPWMVG*SFLTDGVQIKMFLLTLGHTRKPFSGSSELNDAGYNKLPRADAPLENLLRVGRGVYNIKSLTESTRLPGDLVVMSADPGQAKVINVCSATCEEWASRDPKVILRTSTCVSG 1641
            DTDI  II+FA +E++FS R  GD   A TIKHL WMF TYVA SRR YEE VS++H F+PGEDKA RK+RDEFVK+ LGE+ + APP+DTAVLPICS+G+VFI ID KTLKSWGL HS+DAWWY DVL+PFSK ANIKCL + ENA+YAS++ GYLSSLL SGP KCPWM+G SFLTDGVQIK+ L+TL H RK FSGSSELN+AGYNKLPRA+A LE+LL+ GRGVYNI SL EST +  D+VVMSADPGQAKVINV SAT   WA +DP VIL+TSTCV G
Sbjct:  370 DTDI--IIDFARREKDFSDRDCGDGKIAKTIKHLYWMFNTYVAESRRMYEEAVSRAHLFAPGEDKACRKKRDEFVKHELGEKFTYAPPKDTAVLPICSTGAVFIHIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLDHGRKAFSGSSELNEAGYNKLPRANAQLESLLKEGRGVYNISSLLESTSIREDVVVMSADPGQAKVINVSSATASTWAKQDPGVILKTSTCVFG 651          
BLAST of mRNA_L-elsbetiae_contig14273.3171.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 5.380e-114
Identity = 193/327 (59.02%), Postives = 224/327 (68.50%), Query Frame = 1
Query:  661 RGDLVYKKYATKLYNLAKKIIVEFDGTIEKEQELRENALEVDPDTDIASIIEFAGKEREFSIRVSGDDTCAPTIKHLNWMFKTYVAVSRRRYEEVVSQSHAFSPGEDKASRKQRDEFVKNHLGEENSCAPPRDTAVLPICSSGSVFIRIDAKTLKSWGLCHSDDAWWYNDVLQPFSKAANIKCLKSGENAKYASNQQGYLSSLLESGPAKCPWMVG*SFLTDGVQIKMFLLTLGHTRKPFSGSSELNDAGYNKLPRADAPLENLLRVGRGVYNIKSLTESTRLPGDLVVMSADPGQAKVINVCSATCEEWASRDPKVILRTSTCVSG 1641
            RGDLVYKKYATKLY+LAKKII EFDGT E  ++LR+ A  +DP TDI +I++FA                                                        R +R EFVKN LGEE + APP+DTAVLPICS+GSVFI ID KTLKSWGL HS+DAWWY DVL+PFSK ANIKCL + EN++YAS++ GYLSSLL SGP KCPWM+G SFLTDGVQIK+ L+TL H RK F GS++LN+AGYNKLPRAD  LE+LLR GRGVYNI SL +S  +  D+VVMSADPGQAKVINV SAT   WA +DP VIL +STCV G
Sbjct:  317 RGDLVYKKYATKLYDLAKKIITEFDGTPEYAEDLRQKAQSIDPGTDIDTILDFA--------------------------------------------------------RNKRYEFVKNELGEEFTYAPPKDTAVLPICSTGSVFIYIDMKTLKSWGLLHSNDAWWYKDVLRPFSKEANIKCLANKENSRYASSEHGYLSSLLGSGPDKCPWMIGESFLTDGVQIKLLLVTLEHGRKAFPGSTQLNEAGYNKLPRADVQLESLLREGRGVYNISSLLDSPSIREDVVVMSADPGQAKVINVSSATARTWARQDPGVILNSSTCVFG 587          
BLAST of mRNA_L-elsbetiae_contig14273.3171.1 vs. uniprot
Match: D8LP46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP46_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 3.440e-61
Identity = 114/170 (67.06%), Postives = 132/170 (77.65%), Query Frame = 1
Query: 1048 PPRDTAVLPICSSGSVFIRIDAKTLKSWGLCHSDDAWWYNDVLQPFSKAANIKCLKSGENAKYASNQQGYLSSLLESGPAKCPWMVG*SFLTDGVQIKMFLLTLGHTRKPFSGSSELNDAGYNKLPRADAPLENLLRVGRGVYNIKSLTESTRLPGDLVVMSADPGQAKV 1557
            P R +  LP   S   F+R     L+  GL HS+DAWWY DVL+PFSK ANIKCL + ENA+YAS++ GYLSSL  SGP KCPWM+G SFLTDGVQIK+ L+TL H RK FSGSSELN+AGYNKLPRADA LE+LL+ GRGVYNI SL EST +  D++VMSADPGQAKV
Sbjct:  556 PSRCSYALPARPS---FMRAHELALR--GLLHSNDAWWYKDVLRPFSKEANIKCLVNKENARYASSEHGYLSSLQGSGPDKCPWMIGESFLTDGVQIKLLLVTLEHGRKAFSGSSELNEAGYNKLPRADAQLESLLKEGRGVYNISSLLESTSIREDVIVMSADPGQAKV 720          
BLAST of mRNA_L-elsbetiae_contig14273.3171.1 vs. uniprot
Match: A0A835Z996_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z996_9STRA)

HSP 1 Score: 197 bits (501), Expect = 3.030e-51
Identity = 152/480 (31.67%), Postives = 234/480 (48.75%), Query Frame = 1
Query:  229 RTRTVNVGFQSATTCENRDTFQK-----KVDEAIDHFSRERVLASLFANFLFMERLRDGSIIPEPDEKFYNSCLSS-CIKSAGGSLNEDFDRFSALTGLARLVPPKKLNLSQIRRYEAISMATSASTRAQHHTEKRRIVITRWFLRGLVS--RGDLVYKKYATKLYNLAKKI--IVEFDGTIEKEQELRENALEVDPDTDIASIIEFAGKEREFSIRVSGDDTCAPTIKHLNWMFKTYVAVSRRRYEEVVSQSHAFSPGEDKASRKQRDEFVKNHLGEENSCAPPRDTAVLPICSSGSVFIRIDAKTLKSW--GLCHSDDAWWYNDVLQPFSKAANIKCLKSGENAKYASNQQGYLSSLLESGPAKCPWMVG*SFLTDGVQIKMFLLTLGHTRKPFSGSSELNDAGYNKLPRADAPLENLLRVGRGVYNIKSLTESTR-LPGDLVVMSADPGQAKVINVCSATCEEWASRDPKVILRTST 1629
            R R V++G ++      +DT  K     K++E +++FS+ RV ASLF+NF+ +  L   + +P+ D  F+  C    C  +    L+E  +RF++LT L     P      +++  +A  + T+  TR + H + R   I+ W LR L+     D+  K ++ K++ L   I      +G   K +EL     +  P  D           + F+ R     T    I+H   + K YV   RRR+E +V  +    PG+DKAS+  R  ++K  L      APP+  A LP+ S  + FIRID  T+K+    L      W Y+  L P+SK ANI+CL+   N+ +  +++G ++++      +CPW+V  +F TDG Q+K+ LLT   T     G   LNDAGY KL   + PL+ +L +GRGVYN   +    R    D+ +   DPG  K IN    T   W  RD K  L   T
Sbjct:   89 RHRVVSIGLRTVL----KDTALKYDILCKMNELVEYFSKVRVYASLFSNFVVISCLDSTTPLPQIDSAFFRDCFGVFCYPTRQNPLSEYMERFTSLTDLPAFPAPPLTK--EVKNDQATKLWTATKTRMEVHYQSRVKGISNWVLRSLIRPHHTDITDKAFSAKIHKLVTFIDTCASSEGVDAKLEEL---GFDKPPYVDAV---------KTFAERAKKQTTVTNQIQHWYDLQKEYVDEPRRRFELMVRIAIKMYPGKDKASKTARSTYLKAQL---IGKAPPKILAPLPMASPKAAFIRIDKSTMKALFPSLDIQMGPWGYSAFLDPYSKLANIRCLR---NSTWGRSERGMMAAIGNQDMTECPWLVAPTFETDGHQMKLCLLTSDATNGGAPGVRYLNDAGY-KLRTKNVPLQTILDLGRGVYNDTGIIYGGREAVDDVYIGGIDPGIIKPINCIYGTGAAW--RDMKGALTHDT 541          
BLAST of mRNA_L-elsbetiae_contig14273.3171.1 vs. uniprot
Match: A0A836CBH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH4_9STRA)

HSP 1 Score: 174 bits (440), Expect = 2.520e-43
Identity = 146/484 (30.17%), Postives = 229/484 (47.31%), Query Frame = 1
Query:  181 RLFSKVRFGEQVSQLLRTRTVNVGFQSATTCENRDT----FQKKVDEAIDHFSRERVLASLFANFLFMERLR-DGSIIPEPDEKFYNSCLSS-CIKSAGGSLNEDFDRFSALTGLARLVPPKKLNLSQIRRYEAISMATSASTRAQHHTEKRRIVITRWFLRGLV--SRGDLVYKKYATKLYNLAKKIIVEFDGTIEKEQELRENALEVDPDTDIASIIEFAGKEREFSIRVSGDDTCAPTIKHLNWMFKTYVAVSRRRYEEVVSQSHAFSPGEDKASRKQRDEFVKNHLGEENSCAPPRDTAVLPICSSGSVFIRIDAKTLKSWGLCHSDDA----WWYNDVLQPFSKAANIKCLKSGENAKYASNQQGYLSSLLESGPAKCPWMVG*SFLTDGVQIKMFLLTLGHTRKPFSGSSELNDAGYNKLPRADAPLENLLRVGRGVYNIKSLT--ESTRLPGDLVVMSADPGQAKVINVCSATCEEW 1590
            R F ++R G+++   +R R V +G + A   + RD+       K+ E   +FSR RV ASLF+ F+  + L   G ++P  +  F+ SC  + C  ++   L E F +F+ALTG+     P  L++ +I+  +A  + T+  TR + H  KR   I  W  R  +    GD+  K ++ ++  L   +        +    L    L  D  +    II F    RE    V G       I+H   + + Y+   RR +E V+  ++   PG  K  +K R+ F+    G +   APP+  A LP  +  +VFIRID  T+K   L  S D     W Y   L P++K ANI+CL+        S+++  + ++      KCPWMV  +F TDG QIK+ L+T   T     G   L++AGY KL   + PL +++  G GVYN   +   E   +  D ++   DPG  K +N   A   +W
Sbjct:   67 RAFERLR-GKELD--VRHRVVTIGLR-AVLVDVRDSDYADILDKMSELTSYFSRLRVHASLFSQFVITQSLNAPGQVVPTINAAFFTSCFDALCYPASSNPLAEQFSQFTALTGIGSF--PAPLHVKEIKNDQAKKLWTATMTRMKEHYLKRIKAIASWVFRTAILPHHGDMAAKVFSGRIQKLIAFMAHGLSSAADVVATLI--GLGFDNTSYRHDIIAFCESARE----VEG---VTEQIRHWFNLQRDYIDKPRREFEMVIRVANIMHPG--KEGKKDRNLFINTKFGRK---APPKIVAPLPYANPRAVFIRIDKTTMKR--LFPSLDVQMGPWGYRSFLSPYNKKANIRCLRCSTRG---SSERSMMDAIGNPDVTKCPWMVAPTFETDGHQIKLCLMTSQGTNPGAPGLRYLHEAGY-KLRTKNEPLMDIVERGVGVYNDYGVVFGEDRAVLDDTILGGIDPGIFKPVNGIFAYGADW 524          
BLAST of mRNA_L-elsbetiae_contig14273.3171.1 vs. uniprot
Match: A0A835YVY1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVY1_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.500e-40
Identity = 159/575 (27.65%), Postives = 258/575 (44.87%), Query Frame = 1
Query:   19 DGT--PRKKKKRKTATRESSPKTVPDFLQTVGILYPTKYLPASGKLPRAYKGTFCCRLFSKVRFGEQVSQLLRTRTVNVGFQSATTCENR---DTFQKKVDEAIDHFSRERVLASLFANFLFMERLRDGSIIPEPDEKFYNSCLSSCIKSAGGSLNED----FDRFSALTGLARLVPPKKLNLSQIRRYEAISMATSASTRAQHHTEKRRIVITRWFLRGLVS--RGDLVYKKYATKLYNLAKKIIVEFDGTIEKEQELRENALEVDPDTDIASIIEFAGKEREFSIRVSGDDTCAPT-IKHLNWMFKTYVAVSRRRYEEVVSQS-HAFSPGEDKASRKQRDEFVKNHLGEENSCAPPRDTAVLPICSSGSVFIRIDAKTL-KSWGLCHSD--DAWWYNDVLQPFSKAANIKCLKSGENAKYASNQQGYLSSL---------------------LESGPAKCPWMVG*SFLTDGVQIKMFLLTLGHTRKPFSGSSELNDAGYNKLPRADAPLENLLRVGRGVYNIKSLTESTRLPGDLVVMSA-DPGQAKVINVCSATCEEWASRDPKVILRTST 1629
            DGT  P KKKK+ TA           F++ +            G +P  +KG     L  ++  G +  +  R+RTV VG +     +     +  ++    A    S+ R   SLFAN+  +  L  GS +P  +   + + LS C+   G + N D    F  FSA TG+   V    + ++QI   +A  M T+ +   +    KR   I RW LR  ++  RG++  K +A +L+++   ++     ++   Q+L  N L V        + +F       S R   + T  P+ I     + + Y++  RR YE V ++S   FS       +++R+ F+      +    P R+ + LP C +G+ F RID K + K +G    D    WWY D    FSK ANI CL+ G   +YA ++ G   +L                      ++   +CP  V  SFLTDGVQ+K+ L+T         G   L  AGY  L      +  ++ +GRGVYN++++T  +    D V++SA DPGQ ++++   A  EEW   +   ++ T+T
Sbjct:   10 DGTAVPTKKKKKPTAPLNG-------FVERLYDAVGDAVRKIDGDMPDPHKGHV--NLLCRITHGAEAKRTTRSRTVTVGLRKLMLPDGAVAPERMEEVFRAASTFASKVRATTSLFANYTIIAALERGSPLPRFNRAPFEAWLS-CV--TGTTDNNDHIASFAAFSAATGIGH-VTGGPVGMNQIFTAQASEMLTALTNLYEIVYPKRVESIVRWALRRRLAQHRGNMTKKAFARRLHDIMTAVVARPTPSL---QQL--NVLFVHHGLFGVEMAQFQPLLDALSARPVEERTDIPSKIAFCYRLQRDYLSADRRLYESVRAESWRLFSQ-----DKERRNAFMSERWLHDGK--PAREMSPLPTCKTGAAFFRIDQKAIRKLFGRALKDCGGPWWYQDFFDVFSKRANIPCLR-GSGGQYARSEHGAFIALKKTQQQAAIRASLCDPDAIAAFDATALRCPLFVDASFLTDGVQVKLHLVTSALDNGGAPGLWGLAKAGYRALGSTPRTMREIIDIGRGVYNVEAITSESLSDLDGVIISAFDPGQVEIVSGVEALGEEWRRPNAAALMSTAT 558          
BLAST of mRNA_L-elsbetiae_contig14273.3171.1 vs. uniprot
Match: A0A835Z2Y3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2Y3_9STRA)

HSP 1 Score: 162 bits (410), Expect = 1.030e-38
Identity = 140/492 (28.46%), Postives = 223/492 (45.33%), Query Frame = 1
Query:  226 LRTRTVNVGFQS--ATTCENRDTFQKKVDEAIDHFSRERVLASLFANFLFMERLR-DGSIIPEPDEKFYNSCLSS-CIKSAGGSLNEDFDRFSALTGLARLVPPKKLNLSQIRRYEAISMATSASTRAQHHTEKRRIVITRWFLRGLVS--RGDLVYKKYATKLYNL---------------AKKIIVEFDGTIEKEQELRENALEVDPDTDIASIIEFAGKEREFSIRVSGDDTCAPTIKHLNWMFKTYVAVSRRRYEEVVSQSHAFSPGEDKASRKQRDEFVKNHLGEENSCAPPRDTAVLPICSSGSVFIRIDAKTLKSWGLCHSDDA----WWYNDVLQPFSKAANIKCLKSGENAKYASNQQGYLSSLLESGPAKCPWMVG*SFLTDGVQIKMFLLTLGHTRKPFSGSSELNDAGYNKLPRADAPLENLLRVGRGVYNIKSLT--ESTRLPGDLVVMSADPGQAKVINVCSATCEEWASRDPKVILR 1620
            +R R V +G ++  A   E  D   K + E   +FSR RV ASLF+ F+  + L   G ++   D  F+ SC  + C  S    L++ F +F++LTG+     P   N  +I+  +A  + T+  TR + H +KR   I  W  R ++     D+  K ++ K+  L               A  I + FD  I +                   II F  + R     V G       I+H   + + Y+   RRR+E V+  ++   PG  K  ++ R +F+    G +   APP+  A LP  +  +VFIRID  T+K  GL  S +     W Y   + P++K ANI+CL+        S+++  + ++      +CPWM+  +F TDG QIK+ L+T   T     G   L++AGY KL   +  + +++  GRGVYN   +   E   +  D ++   DPG  K +    A   +W   DP   L+
Sbjct:   79 VRYRVVTIGLKAVVADVREKADILDK-LSELTSYFSRLRVYASLFSQFVITQSLNAQGQVMRTIDASFFRSCFDAFCYPSRSNPLSQQFSQFTSLTGITSFPAPAHTN--EIKNDQAKKLWTATMTRMKEHYQKRVKAIANWVFRDVIRPHHSDMADKIFSGKVQQLIAFMSRAPSSAADVVAALIGLGFDDIIYR-----------------LDIITFCERARA----VGG---VTEQIRHWFNLQRQYIDEPRRRFEMVIRAANTLHPG--KQGKQGRKKFIDTKFGRK---APPKIVAPLPYANPRAVFIRIDKSTMK--GLFPSLNIEMGPWGYRSFMSPYNKKANIRCLRCSTRG---SSERSMMEAIANPEVTECPWMLAPTFETDGHQIKLSLMTSHGTNPGPPGLRYLHEAGY-KLRTKNEGIMDVVGRGRGVYNDHGIIFGEDRTVLDDAMLGGVDPGVCKPLCNIYALGADW---DPTAALQ 529          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14273.3171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
UPI0000161E544.670e-26468.98EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus silicul... [more]
Q6XLT6_9PHYC1.310e-24867.17FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a ... [more]
UPI0000161E531.070e-20269.65EsV-1-178/222 paralog 1 n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K772_9PHAE6.750e-13271.83DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JA56_9PHAE5.380e-11459.02DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
D8LP46_ECTSI3.440e-6167.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z996_9STRA3.030e-5131.67Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836CBH4_9STRA2.520e-4330.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVY1_9STRA1.500e-4027.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2Y3_9STRA1.030e-3828.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14273contigL-elsbetiae_contig14273:230..1870 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1641
Cds size1311
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815570.1508186-UTR-L-elsbetiae_contig14273:229..5591622815570.1508186-UTR-L-elsbetiae_contig14273:229..559Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14273 230..559 -
1691682965.7085521-UTR-L-elsbetiae_contig14273:229..5591691682965.7085521-UTR-L-elsbetiae_contig14273:229..559Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig14273 230..559 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815570.1630538-CDS-L-elsbetiae_contig14273:559..18701622815570.1630538-CDS-L-elsbetiae_contig14273:559..1870Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14273 560..1870 -
1691682965.7228038-CDS-L-elsbetiae_contig14273:559..18701691682965.7228038-CDS-L-elsbetiae_contig14273:559..1870Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14273 560..1870 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14273.3171.1prot_L-elsbetiae_contig14273.3171.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14273 560..1870 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14273.3171.1

>prot_L-elsbetiae_contig14273.3171.1 ID=prot_L-elsbetiae_contig14273.3171.1|Name=mRNA_L-elsbetiae_contig14273.3171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=437bp
MVQPSPDGTPRKKKKRKTATRESSPKTVPDFLQTVGILYPTKYLPASGKL
PRAYKGTFCCRLFSKVRFGEQVSQLLRTRTVNVGFQSATTCENRDTFQKK
VDEAIDHFSRERVLASLFANFLFMERLRDGSIIPEPDEKFYNSCLSSCIK
SAGGSLNEDFDRFSALTGLARLVPPKKLNLSQIRRYEAISMATSASTRAQ
HHTEKRRIVITRWFLRGLVSRGDLVYKKYATKLYNLAKKIIVEFDGTIEK
EQELRENALEVDPDTDIASIIEFAGKEREFSIRVSGDDTCAPTIKHLNWM
FKTYVAVSRRRYEEVVSQSHAFSPGEDKASRKQRDEFVKNHLGEENSCAP
PRDTAVLPICSSGSVFIRIDAKTLKSWGLCHSDDAWWYNDVLQPFSKAAN
IKCLKSGENAKYASNQQGYLSSLLESGPAKCPWMVG*
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mRNA from alignment at L-elsbetiae_contig14273:230..1870-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14273.3171.1 ID=mRNA_L-elsbetiae_contig14273.3171.1|Name=mRNA_L-elsbetiae_contig14273.3171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1641bp|location=Sequence derived from alignment at L-elsbetiae_contig14273:230..1870- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTCCAACCATCTCCAGACGGAACCCCGCGCAAGAAGAAAAAACGCAA GACGGCGACACGCGAGTCATCGCCAAAGACCGTCCCGGATTTTCTCCAAA CTGTGGGAATACTTTATCCTACGAAGTATCTCCCTGCGTCAGGGAAGCTA CCCCGGGCGTACAAGGGAACTTTCTGCTGCCGACTCTTCTCGAAAGTGAG ATTTGGAGAGCAAGTCTCCCAGCTTTTGCGAACGAGGACGGTGAATGTTG GCTTTCAGTCAGCAACAACTTGCGAAAACCGCGACACCTTCCAGAAGAAA GTCGATGAGGCGATCGATCACTTTTCCCGGGAAAGAGTGCTGGCCTCCCT TTTCGCAAACTTCTTGTTCATGGAACGCCTCCGAGACGGATCAATCATCC CCGAGCCAGATGAAAAGTTTTACAATTCGTGCTTGTCATCATGCATCAAA AGTGCTGGGGGCAGCCTCAACGAGGACTTCGACCGTTTTTCTGCACTGAC GGGACTCGCACGACTCGTGCCACCCAAGAAGCTCAATCTTTCCCAGATTC GAAGATACGAGGCAATTTCCATGGCTACCTCGGCGTCAACCCGTGCTCAA CATCATACCGAAAAGAGGAGAATTGTGATCACGAGATGGTTTCTGCGGGG GTTGGTGTCCAGAGGAGATCTGGTGTACAAAAAGTACGCGACCAAACTCT ACAACCTTGCGAAGAAGATTATCGTCGAGTTTGACGGCACGATCGAGAAA GAACAAGAGCTCCGCGAAAACGCACTTGAGGTGGACCCGGACACGGACAT CGCTTCCATCATCGAGTTTGCCGGGAAAGAGAGGGAGTTTTCTATTCGTG TTTCGGGTGACGACACATGTGCACCGACGATCAAGCATCTGAACTGGATG TTCAAAACCTACGTGGCTGTGTCTCGGCGAAGGTACGAGGAAGTCGTCTC CCAATCCCACGCGTTCTCCCCTGGTGAAGACAAGGCATCAAGGAAGCAGA GGGACGAGTTCGTGAAGAACCATTTGGGGGAAGAGAACAGTTGTGCTCCA CCGAGAGACACTGCCGTGTTGCCCATCTGCTCATCCGGTTCGGTGTTCAT CCGGATCGATGCAAAGACGCTCAAGAGCTGGGGCCTTTGTCATTCCGATG ATGCGTGGTGGTACAACGATGTCTTACAACCCTTCTCAAAAGCGGCCAAT ATCAAGTGCCTCAAGAGCGGGGAAAACGCCAAGTACGCGTCGAATCAACA AGGGTACCTGTCGAGTCTGTTAGAAAGTGGTCCCGCCAAGTGCCCCTGGA TGGTTGGTTAGAGTTTTTTGACGGATGGTGTGCAGATCAAAATGTTCCTG TTAACCCTGGGACACACGAGGAAGCCCTTCTCCGGGTCAAGTGAGCTGAA TGATGCGGGGTACAATAAGTTGCCTAGAGCCGATGCTCCGTTAGAGAATC TACTGAGAGTGGGGAGAGGTGTGTACAACATTAAGAGCCTGACTGAGTCC ACTAGGTTGCCGGGAGATCTCGTGGTGATGTCCGCCGATCCGGGGCAGGC GAAGGTCATCAACGTTTGTTCTGCCACTTGCGAAGAATGGGCTTCGAGAG ATCCGAAAGTTATTCTCCGAACGTCGACTTGTGTTTCGGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig14273:230..1870-

>mRNA_L-elsbetiae_contig14273.3171.1 ID=mRNA_L-elsbetiae_contig14273.3171.1|Name=mRNA_L-elsbetiae_contig14273.3171.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2622bp|location=Sequence derived from alignment at L-elsbetiae_contig14273:230..1870- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTCCAACCATCTCCAGACGGAACCCCGCGCAAGAAGAAAAAACGCAA
GACGGCGACACGCGAGTCATCGCCAAAGACCGTCCCGGATTTTCTCCAAA
CTGTGGGAATACTTTATCCTACGAAGTATCTCCCTGCGTCAGGGAAGCTA
CCCCGGGCGTACAAGGGAACTTTCTGCTGCCGACTCTTCTCGAAAGTGAG
ATTTGGAGAGCAAGTCTCCCAGCTTTTGCGAACGAGGACGGTGAATGTTG
GCTTTCAGTCAGCAACAACTTGCGAAAACCGCGACACCTTCCAGAAGAAA
GTCGATGAGGCGATCGATCACTTTTCCCGGGAAAGAGTGCTGGCCTCCCT
TTTCGCAAACTTCTTGTTCATGGAACGCCTCCGAGACGGATCAATCATCC
CCGAGCCAGATGAAAAGTTTTACAATTCGTGCTTGTCATCATGCATCAAA
AGTGCTGGGGGCAGCCTCAACGAGGACTTCGACCGTTTTTCTGCACTGAC
GGGACTCGCACGACTCGTGCCACCCAAGAAGCTCAATCTTTCCCAGATTC
GAAGATACGAGGCAATTTCCATGGCTACCTCGGCGTCAACCCGTGCTCAA
CATCATACCGAAAAGAGGAGAATTGTGATCACGAGATGGTTTCTGCGGGG
GTTGGTGTCCAGAGGAGATCTGGTGTACAAAAAGTACGCGACCAAACTCT
ACAACCTTGCGAAGAAGATTATCGTCGAGTTTGACGGCACGATCGAGAAA
GAACAAGAGCTCCGCGAAAACGCACTTGAGGTGGACCCGGACACGGACAT
CGCTTCCATCATCGAGTTTGCCGGGAAAGAGAGGGAGTTTTCTATTCGTG
TTTCGGGTGACGACACATGTGCACCGACGATCAAGCATCTGAACTGGATG
TTCAAAACCTACGTGGCTGTGTCTCGGCGAAGGTACGAGGAAGTCGTCTC
CCAATCCCACGCGTTCTCCCCTGGTGAAGACAAGGCATCAAGGAAGCAGA
GGGACGAGTTCGTGAAGAACCATTTGGGGGAAGAGAACAGTTGTGCTCCA
CCGAGAGACACTGCCGTGTTGCCCATCTGCTCATCCGGTTCGGTGTTCAT
CCGGATCGATGCAAAGACGCTCAAGAGCTGGGGCCTTTGTCATTCCGATG
ATGCGTGGTGGTACAACGATGTCTTACAACCCTTCTCAAAAGCGGCCAAT
ATCAAGTGCCTCAAGAGCGGGGAAAACGCCAAGTACGCGTCGAATCAACA
AGGGTACCTGTCGAGTCTGTTAGAAAGTGGTCCCGCCAAGTGCCCCTGGA
TGGTTGGTTAGATGGTCCAACCATCTCCAGACGGAACCCCGCGCAAGAAG
AAAAAACGCAAGACGGCGACACGCGAGTCATCGCCAAAGACCGTCCCGGA
TTTTCTCCAAACTGTGGGAATACTTTATCCTACGAAGTATCTCCCTGCGT
CAGGGAAGCTACCCCGGGCGTACAAGGGAACTTTCTGCTGCCGACTCTTC
TCGAAAGTGAGATTTGGAGAGCAAGTCTCCCAGCTTTTGCGAACGAGGAC
GGTGAATGTTGGCTTTCAGTCAGCAACAACTTGCGAAAACCGCGACACCT
TCCAGAAGAAAGTCGATGAGGCGATCGATCACTTTTCCCGGGAAAGAGTG
CTGGCCTCCCTTTTCGCAAACTTCTTGTTCATGGAACGCCTCCGAGACGG
ATCAATCATCCCCGAGCCAGATGAAAAGTTTTACAATTCGTGCTTGTCAT
CATGCATCAAAAGTGCTGGGGGCAGCCTCAACGAGGACTTCGACCGTTTT
TCTGCACTGACGGGACTCGCACGACTCGTGCCACCCAAGAAGCTCAATCT
TTCCCAGATTCGAAGATACGAGGCAATTTCCATGGCTACCTCGGCGTCAA
CCCGTGCTCAACATCATACCGAAAAGAGGAGAATTGTGATCACGAGATGG
TTTCTGCGGGGGTTGGTGTCCAGAGGAGATCTGGTGTACAAAAAGTACGC
GACCAAACTCTACAACCTTGCGAAGAAGATTATCGTCGAGTTTGACGGCA
CGATCGAGAAAGAACAAGAGCTCCGCGAAAACGCACTTGAGGTGGACCCG
GACACGGACATCGCTTCCATCATCGAGTTTGCCGGGAAAGAGAGGGAGTT
TTCTATTCGTGTTTCGGGTGACGACACATGTGCACCGACGATCAAGCATC
TGAACTGGATGTTCAAAACCTACGTGGCTGTGTCTCGGCGAAGGTACGAG
GAAGTCGTCTCCCAATCCCACGCGTTCTCCCCTGGTGAAGACAAGGCATC
AAGGAAGCAGAGGGACGAGTTCGTGAAGAACCATTTGGGGGAAGAGAACA
GTTGTGCTCCACCGAGAGACACTGCCGTGTTGCCCATCTGCTCATCCGGT
TCGGTGTTCATCCGGATCGATGCAAAGACGCTCAAGAGCTGGGGCCTTTG
TCATTCCGATGATGCGTGGTGGTACAACGATGTCTTACAACCCTTCTCAA
AAGCGGCCAATATCAAGTGCCTCAAGAGCGGGGAAAACGCCAAGTACGCG
TCGAATCAACAAGGGTACCTGTCGAGTCTGTTAGAAAGTGGTCCCGCCAA
GTGCCCCTGGATGGTTGGTTAG
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