prot_L-elsbetiae_contig14266.3163.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14266.3163.1
Unique Nameprot_L-elsbetiae_contig14266.3163.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length102
Homology
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BLAST of mRNA_L-elsbetiae_contig14266.3163.1 vs. uniprot
Match: D8LM21_ECTSI (Stn1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM21_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 7.770e-45
Identity = 82/102 (80.39%), Postives = 89/102 (87.25%), Query Frame = 0 
Query:    1 MELLRAVMSSLHRDGALHFSDKARDVYVLVSRGRVLQPAVEEACRRQRLGLTHENEIIRALQGSALFHHVPGARIRACVHRMKKS-RCAQQXXXXXXXPGSP 101
            +ELLRAVMSSLHRDGALHF D+ARDVYVLVSRGRVL+PAVEEACRR+RLGL+ ENEIIRALQGSAL HHVPGARIRACV+RMKK+ R AQQ       P SP
Sbjct:  299 LELLRAVMSSLHRDGALHFLDRARDVYVLVSRGRVLRPAVEEACRRRRLGLSQENEIIRALQGSALLHHVPGARIRACVYRMKKAGRSAQQQQHQQQQPDSP 400
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14266.3163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LM21_ECTSI7.770e-4580.39Stn1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14266contigL-elsbetiae_contig14266:2935..3240 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14266.3163.1mRNA_L-elsbetiae_contig14266.3163.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14266 2926..3379 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14266.3163.1 ID=prot_L-elsbetiae_contig14266.3163.1|Name=mRNA_L-elsbetiae_contig14266.3163.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp
MELLRAVMSSLHRDGALHFSDKARDVYVLVSRGRVLQPAVEEACRRQRLG
LTHENEIIRALQGSALFHHVPGARIRACVHRMKKSRCAQQQQQQQQQPGS
P*
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