prot_L-elsbetiae_contig14240.3147.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig14240.3147.1
Unique Name	prot_L-elsbetiae_contig14240.3147.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	112

Homology

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BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: D8LM34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM34_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 9.420e-59
Identity = 102/110 (92.73%), Postives = 106/110 (96.36%), Query Frame = 0

Query:    1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 110
            VRLVADE G FGHPL+RESSVLALSKFMCISEAFC+RNLSLLFTTLERS DTAVRANIIVALGDLAFRFPNALEPWNP IY+RLKDD+PGVRANAIMVLTHLILNDMVKV
Sbjct: 1064 VRLVADEGGCFGHPLVRESSVLALSKFMCISEAFCERNLSLLFTTLERSNDTAVRANIIVALGDLAFRFPNALEPWNPHIYNRLKDDSPGVRANAIMVLTHLILNDMVKV 1173

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BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A7S3MAC1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAC1_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.040e-40
Identity = 62/108 (57.41%), Postives = 84/108 (77.78%), Query Frame = 0

Query:    3 LVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 110
            +VA+E  +F HPLLRE+S+LAL ++MC S   CD+ L LLFT LER     VR ++++ALGDLAFRFPN++EPW P +Y RL+D++  VR N +MV+THL+LNDM+KV
Sbjct:    4 MVANEQKKFSHPLLRETSILALCRYMCTSSVVCDQLLPLLFTVLERESAVTVRTSVMIALGDLAFRFPNSIEPWTPRMYARLRDESVVVRYNTLMVITHLVLNDMIKV 111

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BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A3R7WGF1_9STRA (Cnd1 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WGF1_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.360e-38
Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 0

Query:    1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 110
            +RLVA+E+G F   L++E+S +AL KFMCIS  FC++NL L+FT L+  +  +VR+NI+VALGDL+FRFPN +EPW   IY RL+D N  VR N IMVLTHLILNDMVKV
Sbjct:   23 IRLVANEDGIFDDELIKEASTVALCKFMCISAEFCEKNLPLIFTRLKECQQPSVRSNIVVALGDLSFRFPNLVEPWTSHIYARLRDINVNVRKNTIMVLTHLILNDMVKV 132

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BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A1V9YJJ7_9STRA (Condensin complex subunit (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YJJ7_9STRA)

HSP 1 Score: 142 bits (358), Expect = 4.660e-37
Identity = 67/110 (60.91%), Postives = 87/110 (79.09%), Query Frame = 0

Query:    1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 110
            VR+VA+E+G F   +++E++++AL KFMCIS  FC++NL L+FT L+ S+  +VR NI+VALGDL+FRFPN +EPW   IY RL+D N  VR N IMVLTHLILNDMVKV
Sbjct: 1131 VRMVANEDGVFDDEMVKETAIVALCKFMCISATFCEKNLPLIFTRLKESEQPSVRCNIVVALGDLSFRFPNLIEPWTSHIYARLRDINTNVRKNTIMVLTHLILNDMVKV 1240

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BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A1V9YNA9_9STRA (Condensin complex subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNA9_9STRA)

HSP 1 Score: 142 bits (357), Expect = 6.350e-37
Identity = 68/110 (61.82%), Postives = 87/110 (79.09%), Query Frame = 0

Query:    1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 110
            VRLVA+E+G F   ++RE++++AL KFMCIS  FC++NL L+FT L+ S+  +VR NI+VALGDL+FRFPN +EPW   IY RL+D +  VR N IMVLTHLILNDMVKV
Sbjct:  919 VRLVANEDGAFDDEMIRETAIVALCKFMCISSDFCEKNLPLVFTKLKESEQPSVRCNIVVALGDLSFRFPNLVEPWTSHIYARLRDIDTDVRKNTIMVLTHLILNDMVKV 1028

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BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A397DUM4_9STRA (Cnd1 domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DUM4_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.170e-36
Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 0

Query:    1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 110
            +RLVA+E+G F   L++E+S +AL KFMCIS  FC++NL L+FT L+  +  +VR+NI+VALGDL+FRFPN +EPW   IY RL+D N  VR N IMVLTHLILNDMVKV
Sbjct:  663 IRLVANEDGIFDDELIKEASTVALCKFMCISAEFCEKNLPLIFTRLKECQQPSVRSNIVVALGDLSFRFPNLVEPWTSHIYARLRDINVNVRKNTIMVLTHLILNDMVKV 772

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BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A3R6ZLG0_9STRA (Cnd1 domain-containing protein n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZLG0_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.170e-36
Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 0

Query:    1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 110
            +RLVA+E+G F   L++E+S +AL KFMCIS  FC++NL L+FT L+  +  +VR+NI+VALGDL+FRFPN +EPW   IY RL+D N  VR N IMVLTHLILNDMVKV
Sbjct:  717 IRLVANEDGIFDDELIKEASTVALCKFMCISAEFCEKNLPLIFTRLKECQQPSVRSNIVVALGDLSFRFPNLVEPWTSHIYARLRDINVNVRKNTIMVLTHLILNDMVKV 826

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BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A836CLB4_9STRA (Non-SMC mitotic condensation complex subunit 1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB4_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.210e-36
Identity = 71/115 (61.74%), Postives = 88/115 (76.52%), Query Frame = 0

Query:    2 RLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTA------VRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 110
            R+VA+E+G FGHPLLRES+VLAL+K+MC+S A C+R L LLFT L  +   A      +R+ I+VALGDLAFRFPNALEPW   +Y  L+D  P VR +A++VLTHLILNDMVKV
Sbjct: 1136 RIVANEDGAFGHPLLRESAVLALAKYMCVSAAACERYLPLLFTALAAAAPAAAARGAQLRSTIVVALGDLAFRFPNALEPWGARMYACLRDSAPRVRGDALLVLTHLILNDMVKV 1250

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BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A024UUV2_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUV2_9STRA)

HSP 1 Score: 139 bits (351), Expect = 4.090e-36
Identity = 66/110 (60.00%), Postives = 86/110 (78.18%), Query Frame = 0

Query:    1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 110
            +RLVA+++G F   L++E++ +AL KFMCIS  FC++NL L+FT L+  +  +VR+NI+VALGDL+FRFPN +EPW   IY RL+D N  VR N IMVLTHLILNDMVKV
Sbjct:  894 IRLVANDDGTFDDELIKETATVALCKFMCISAEFCEKNLPLIFTRLKECEQPSVRSNIVVALGDLSFRFPNLVEPWTSHIYARLRDVNVNVRKNTIMVLTHLILNDMVKV 1003

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BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Match: A0A6G0XYQ8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYQ8_9STRA)

HSP 1 Score: 139 bits (351), Expect = 4.090e-36
Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 0

Query:    1 VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSKDTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLTHLILNDMVKV 110
            +RLVA+E G F   L++E+S +AL KFMCIS  FCD+NL L+FT L+  +  +VR+NI+VALGDL+FRFPN +EPW   IY RL+D +  VR N IMVLTHLILNDMVKV
Sbjct:  897 IRLVANEEGIFDDDLIKEASTVALCKFMCISGDFCDKNLPLIFTKLKECQQPSVRSNIVVALGDLSFRFPNLVEPWTSHIYARLRDIDVNVRKNTIMVLTHLILNDMVKV 1006

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig14240.3147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LM34_ECTSI	9.420e-59	92.73	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S3MAC1_9STRA	2.040e-40	57.41	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
A0A3R7WGF1_9STRA	1.360e-38	61.82	Cnd1 domain-containing protein n=1 Tax=Aphanomyces...	[more]
A0A1V9YJJ7_9STRA	4.660e-37	60.91	Condensin complex subunit (Fragment) n=1 Tax=Thrau...	[more]
A0A1V9YNA9_9STRA	6.350e-37	61.82	Condensin complex subunit n=1 Tax=Achlya hypogyna ...	[more]
A0A397DUM4_9STRA	1.170e-36	61.82	Cnd1 domain-containing protein (Fragment) n=2 Tax=...	[more]
A0A3R6ZLG0_9STRA	1.170e-36	61.82	Cnd1 domain-containing protein n=13 Tax=Aphanomyce...	[more]
A0A836CLB4_9STRA	2.210e-36	61.74	Non-SMC mitotic condensation complex subunit 1-dom...	[more]
A0A024UUV2_9STRA	4.090e-36	60.00	Uncharacterized protein n=4 Tax=Aphanomyces invada...	[more]
A0A6G0XYQ8_9STRA	4.090e-36	61.82	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032682	Condensin complex subunit 1, C-terminal	PFAM	PF12717	Cnd1	coord: 53..111 e-value: 1.7E-16 score: 60.7
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..110 e-value: 1.2E-7 score: 32.7
IPR007673	Condensin subunit 1	PANTHER	PTHR14222:SF2	CONDENSIN COMPLEX SUBUNIT 1	coord: 2..110
IPR026971	Condensin subunit 1/Condensin-2 complex subunit D3	PANTHER	PTHR14222	CONDENSIN	coord: 2..110
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 12..108

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig14240	contig	L-elsbetiae_contig14240:323..1503 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig14240.3147.1	mRNA_L-elsbetiae_contig14240.3147.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig14240 323..1503 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig14240.3147.1 ID=prot_L-elsbetiae_contig14240.3147.1|Name=mRNA_L-elsbetiae_contig14240.3147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp
VRLVADENGRFGHPLLRESSVLALSKFMCISEAFCDRNLSLLFTTLERSK
DTAVRANIIVALGDLAFRFPNALEPWNPLIYDRLKDDNPGVRANAIMVLT
HLILNDMVKVN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032682	Cnd1_C
IPR011989	ARM-like
IPR007673	Condensin_cplx_su1
IPR026971	CND1/NCAPD3
IPR016024	ARM-type_fold