prot_L-elsbetiae_contig14237.3143.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14237.3143.1
Unique Nameprot_L-elsbetiae_contig14237.3143.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length529
Homology
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BLAST of mRNA_L-elsbetiae_contig14237.3143.1 vs. uniprot
Match: A0A6H5JVW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW2_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 3.020e-6
Identity = 46/114 (40.35%), Postives = 57/114 (50.00%), Query Frame = 0 
Query:  349 NARDQPGTLTLESGDDSTTATLASSFELQTSGDIILDTSGTGEITLTSASSIGLVAATFISLGSSPLLGWDVGTGPGSILAAAADTHTVIINNTVGSYLRTFSGDPGNGVTDTV 462
            NA   PGTLTLESGD +TTATLAS F+L +SG I L                           +S L GWD+ T   + +     T T IIN+ VGSY R ++ +PG   TD V
Sbjct:  861 NAGANPGTLTLESGDGTTTATLASEFDLSSSGGIDLVXXXXXXXXXXXXXXXXXXXXXXXXXAASTLQGWDMAT---ATIDEPVGTQTAIINSIVGSYTRKWTANPGYPSTDIV 971
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14237.3143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JVW2_9PHAE3.020e-640.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14237contigL-elsbetiae_contig14237:750..2336 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14237.3143.1mRNA_L-elsbetiae_contig14237.3143.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14237 660..3633 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14237.3143.1 ID=prot_L-elsbetiae_contig14237.3143.1|Name=mRNA_L-elsbetiae_contig14237.3143.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=529bp
MGGDVTIAGGTGSASGGGAVSISSGITANGATAAVVISSANAGTLFGTES
GLVSLSSGSSPNGNSGAIMIGSGAATNGAGGKLSLTVGSAGSAVGGDVDL
VAGSSDDSTGGAVSITSGSSTDGSTGTITILSPNAGTTGVSGAIVLSSGT
TSLGNSGTVLIGSGAASGGAGGAVSLTVGSGTTNPGGSLSIAAGASSAAT
GAGGSLSIDGGAGTGATTSAGGAVLITGGTGSTGTGGQLTFTSGTGAATS
SGDVVIESASAGAGPPGGVSGALTFRSGSSTSGNSGAVGIESGAASTGQA
GGLSLTVGTGDTGDGGAVIITAGDTSESAASNGGAINIKSGANTAGAVNA
RDQPGTLTLESGDDSTTATLASSFELQTSGDIILDTSGTGEITLTSASSI
GLVAATFISLGSSPLLGWDVGTGPGSILAAAADTHTVIINNTVGSYLRTF
SGDPGNGVTDTVTVTNSRIATGDNVMAMVTNACGNTQTMSVLSTDTSTAG
KVAIKVLVADECDDLSDYTVSFVVFKGI*
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