mRNA_L-elsbetiae_contig1422.3137.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1422.3137.1 vs. uniprot
Match: D7FN45_ECTSI (Similarities to Heat shock protein 70-probable alternative splicing n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN45_ECTSI) HSP 1 Score: 309 bits (791), Expect = 1.130e-101 Identity = 157/184 (85.33%), Postives = 171/184 (92.93%), Query Frame = 1 Query: 1 GTCAALAATGFRGRQTVVGIDLGTTYSVVGVNEAGKITIIPGPGGNPLLPSIVSFLENGRVAVGQDAVELLEHQPANTIYGAKRFIGRKFSDSAVSEEAAEHQFQIIQNNHDLSEAWFEIKRLGHPPTVSPQVVGSHVLGQLLQRAADYLGHSLVSKAVIAVPAKFDARQRAATVEAFRLAGLQ 552 G CAALAATGFRGRQTVVGIDLGTT+SV+GVNE GKI IIPG G+PLLPS+VSFL+NGRVAVGQDA +LLE QPANTIYGAKRFIGR+FSDSAVSEEAAEHQFQ++Q DLSEAWF+IKR GHPP+VSPQ+VGSHVLG+LLQRAA YLGHS VSKAVIAVPAKFDARQ+AATVEAFRLAGLQ Sbjct: 13 GACAALAATGFRGRQTVVGIDLGTTFSVIGVNEGGKIAIIPGAEGSPLLPSVVSFLDNGRVAVGQDATKLLESQPANTIYGAKRFIGREFSDSAVSEEAAEHQFQLVQTKEDLSEAWFKIKRSGHPPSVSPQMVGSHVLGELLQRAAVYLGHSQVSKAVIAVPAKFDARQKAATVEAFRLAGLQ 196
BLAST of mRNA_L-elsbetiae_contig1422.3137.1 vs. uniprot
Match: A0A7S3XQ15_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ15_HETAK) HSP 1 Score: 190 bits (482), Expect = 1.970e-55 Identity = 99/183 (54.10%), Postives = 128/183 (69.95%), Query Frame = 1 Query: 7 CAALAATGFRGRQTVVGIDLGTTYSVVGVNEAGKITIIPGPGGNPLLPSIVSFLENGRVAVGQDAVELLEHQPANTIYGAKRFIGRKFSDSAVSEEAAEHQFQIIQNNHDLSEAWFEIKRL-GHPPTVSPQVVGSHVLGQLLQRAADYLGHSLVSKAVIAVPAKFDARQRAATVEAFRLAGLQ 552 CA LAA GF+GR +VVG+DLGTTYSV+G+N G + I+P G+ L+PS V+FL GRVAVG+ A LEH P +TIY AKRFIGR +D ++ +E AEH F++++ + SE WF + GH V+P+ VG+ VL L AD+LG+ V KAVIAVPAKFDARQR T EA+R AGL+ Sbjct: 16 CAVLAAMGFKGRISVVGVDLGTTYSVIGINNGGTVEIVPDKEGHVLVPSTVAFLPEGRVAVGRAARRYLEHDPTHTIYNAKRFIGRAAADPSLVKELAEHDFELVERPGNASEGWFRLDEARGHGAAVAPEGVGARVLLHLKAMVADHLGYDQVDKAVIAVPAKFDARQRQMTAEAYRQAGLR 198
BLAST of mRNA_L-elsbetiae_contig1422.3137.1 vs. uniprot
Match: A0A835Z661_9STRA (Heat shock protein 70 family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z661_9STRA) HSP 1 Score: 170 bits (431), Expect = 6.720e-48 Identity = 98/186 (52.69%), Postives = 128/186 (68.82%), Query Frame = 1 Query: 7 CAALAATGFRGRQTVVGIDLGTTYSVVGVNEAGKITIIPGPGGNPLLPSIVSFLENGRVAVGQDAVELLEHQPANTIYGAKRFIGRKFSDSA-VSEEAAEHQFQIIQN--NHDLSEAWFEIKRLG-HPPTVSPQVVGSHVLGQLLQRAADYLGHSLVSKAVIAVPAKFDARQRAATVEAFRLAGLQ 552 CA LAA GF+GR TVVGIDLGTTYSVVGVNE G + II G+ L+PS+VSFL +G VAVG A +L + A TIY AKR IGR+F D + E F++++ + D S+AWF+++ + HP +SPQ +G+ V+ +LL+ LGH+ V AVIAVPAKFDARQR AT +AF+ AGL+ Sbjct: 13 CAVLAANGFKGRVTVVGIDLGTTYSVVGVNEGGVVRIISAEDGSYLVPSMVSFLRSGEVAVGTAARQLAGNDTATTIYEAKRLIGREFPDEEDLLAEGTGRPFRLVRKPFSEDPSDAWFDLQSMTQHPAAISPQGIGTMVVRELLRMVHLDLGHTQVRAAVIAVPAKFDARQRRATAQAFQAAGLK 198
BLAST of mRNA_L-elsbetiae_contig1422.3137.1 vs. uniprot
Match: A0A7S0SSX6_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SSX6_9STRA) HSP 1 Score: 165 bits (418), Expect = 2.410e-46 Identity = 93/185 (50.27%), Postives = 124/185 (67.03%), Query Frame = 1 Query: 7 CAALAATGFRGRQTVVGIDLGTTYSVVGVNEAGKITIIPGPGGNPLLPSIVSFLENGRVAVGQDAVELLEHQPANTIYGAKRFIGRKFSDSAVSEEAAEHQFQIIQNNH---DLSEAWFEIKRLGHPPTVSPQVVGSHVLGQLLQRAADYLGHSLVSKAVIAVPAKFDARQRAATVEAFRLAGLQ 552 CA LAA GFRGR T +G+DLGTT+SVVGVN GK+ II G+ + PS+V + NG + G DA+ L P NTIY AKRFIG+ ++DS+V E ++H + + + +H + SE F L VSP+ VGS VL LL+ AD+LGH+ V+KAVIAVPAKFD+ QR AT +A++ AGL+ Sbjct: 18 CAVLAALGFRGRVTTIGVDLGTTFSVVGVNINGKVHIINDSKGHLIFPSVVHYQSNGEILAGYDALPFLTSDPLNTIYNAKRFIGKNWNDSSVIEYGSKHAYTVDKLSHGQSNFSEVGFA---LSSGLIVSPEQVGSQVLKYLLKLTADFLGHNQVNKAVIAVPAKFDSIQRQATGDAYKRAGLK 199
BLAST of mRNA_L-elsbetiae_contig1422.3137.1 vs. uniprot
Match: A0A6U1BP74_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1BP74_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.670e-44 Identity = 86/184 (46.74%), Postives = 115/184 (62.50%), Query Frame = 1 Query: 7 CAALAATGFRGRQTVVGIDLGTTYSVVGVNEAGKITIIPGPGGNPLLPSIVSFLENGRVAVGQDAVELLEHQPANTIYGAKRFIGRKFSDSAVSEEAAEHQFQIIQNN--HDLSEAWFEIKRLGHPPTVSPQVVGSHVLGQLLQRAADYLGHSLVSKAVIAVPAKFDARQRAATVEAFRLAGLQ 552 CA +AA+GFRGR VGIDLGTTYSV+ + ++ L+PS+V F G V VG DA+ L P N I+ AKRFIGR F D AV E+ A H F+++ + S+AWF + GH VSP+ VG HVL +L A LGH +++AV++VPAKF+ RQR ATV+A++ AGL+ Sbjct: 40 CAMMAASGFRGRPNTVGIDLGTTYSVIALRTLNATRVLKDEHQRSLIPSMVYFGPGGVVKVGYDAMAFLHSDPENVIFNAKRFIGRSFDDEAVQEQRAVHPFRVVNRSVPEVRSQAWFALSAQGHEDWVSPESVGKHVLQRLKDIAVFNLGHKQITRAVVSVPAKFNTRQRQATVDAYKAAGLK 223
BLAST of mRNA_L-elsbetiae_contig1422.3137.1 vs. uniprot
Match: A0A485LDT5_9STRA (Aste57867_18428 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDT5_9STRA) HSP 1 Score: 155 bits (392), Expect = 2.920e-42 Identity = 90/178 (50.56%), Postives = 114/178 (64.04%), Query Frame = 1 Query: 16 LAATGFRGRQTVVGIDLGTTYSVVGVNEAGKITIIPGPGGNPLLPSIVSFLENGRVAVGQDAVELLEHQPANTIYGAKRFIGRKFSDSAVSEEAAEHQFQIIQNNHDLSEAWFEIKRLGHPPTVSPQVVGSHVLGQLLQRAADYLGHSLVSKAVIAVPAKFDARQRAATVEAFRLAGL 549 LA +G GR+ +VGIDLGTTYSVV VN G +T+IP P G+ LLPSIV+F +G V VG+ A P +TIY AKRFIGR F D++V+ EA ++F + QN F + GHP VSP +G HV+ L A +LGH + AVIA+PA FDA QR AT++AF LAGL Sbjct: 22 LARSGHLGREHIVGIDLGTTYSVVAVNRKGNVTVIPDPSGHVLLPSIVAFKPHGEVLVGRAARHHRSVDPKHTIYNAKRFIGRPF-DASVAAEAHLYEFSLEQNATG-DNVCFGLHLPGHPTCVSPITIGHHVVKTLRAAAHAFLGHDQIYGAVIAIPAGFDANQRKATIQAFELAGL 197
BLAST of mRNA_L-elsbetiae_contig1422.3137.1 vs. uniprot
Match: A0A1V9YJC7_9STRA (Hsp70-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJC7_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.850e-40 Identity = 86/180 (47.78%), Postives = 114/180 (63.33%), Query Frame = 1 Query: 16 LAATGFRGRQTVVGIDLGTTYSVVGVNEAGKITIIPGPGGNPLLPSIVSFLENGRVAVGQDAVELLEHQPANTIYGAKRFIGRKFSDSAVSEEAAEHQFQIIQNNHDLSEAWFEIKRLGHPPT-VSPQVVGSHVLGQLLQRAADYLGHSLVSKAVIAVPAKFDARQRAATVEAFRLAGLQ 552 LA +G+ G++ VGIDLGTTYSVV VN+ G +++IP G LLPSIV+F + G V VG+ A + + P +TI+ AKRFIGR F D AV+ EA +++ + + H + F + GH VSP VG+H++ L A YLGH V AVIAVPA FD QR ATV AF+ AGL+ Sbjct: 21 LARSGYTGKEHSVGIDLGTTYSVVAVNQKGHVSVIPDADGFTLLPSIVAFKDGGEVLVGRSARQYRSNDPKHTIFNAKRFIGRPFDD-AVAAEAPHYEYGLSLDTHGVC---FPLALSGHATNCVSPVAVGAHIVSHLKASAMAYLGHDQVYSAVIAVPASFDVAQRQATVAAFKAAGLK 196
BLAST of mRNA_L-elsbetiae_contig1422.3137.1 vs. uniprot
Match: A0A024TK05_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TK05_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.940e-40 Identity = 85/179 (47.49%), Postives = 114/179 (63.69%), Query Frame = 1 Query: 16 LAATGFRGRQTVVGIDLGTTYSVVGVNEAGKITIIPGPGGNPLLPSIVSFLENGRVAVGQDAVELLEHQPANTIYGAKRFIGRKFSDSAVSEEAAEHQFQIIQNNHDLSEAWFEIKRLGHPPTVSPQVVGSHVLGQLLQRAADYLGHSLVSKAVIAVPAKFDARQRAATVEAFRLAGLQ 552 LA +G G++ +VGIDLGTTYSVV VN G +T++P G+ LLPS+V+F NG V VG+DA P +TI AKRFIGR+F D +++ EAA + F ++ N S F + GHP +SP +G +V+ L + A +LGH + AVIA+PA FDA QR ATV AF AGL+ Sbjct: 22 LARSGHLGKEHLVGIDLGTTYSVVAVNRHGNVTVMPDVHGHFLLPSVVAFKPNGGVLVGRDARHYRRVDPKHTISNAKRFIGRQF-DESIAAEAALYDFPLLANTTGDSHVCFGLNLPGHPSCISPVDIGYYVVKALKETAMAFLGHDQIYGAVIAIPAGFDASQRKATVAAFERAGLK 199
BLAST of mRNA_L-elsbetiae_contig1422.3137.1 vs. uniprot
Match: A0A1V9Z4N4_9STRA (Hsp70 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z4N4_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.310e-39 Identity = 90/180 (50.00%), Postives = 115/180 (63.89%), Query Frame = 1 Query: 16 LAATGFRGRQTVVGIDLGTTYSVVGVNEAGKITIIPGPGGNPLLPSIVSFLENGRVAVGQDAVELLEHQPANTIYGAKRFIGRKFSDSAVSEEAAEHQFQIIQNNHDLSEAWFEIKRLGHPPT-VSPQVVGSHVLGQLLQRAADYLGHSLVSKAVIAVPAKFDARQRAATVEAFRLAGLQ 552 LA +G+ G++ VGIDLGTTYSVV VN G I++IP G LLPSIV+F + G V VG++A + P +TI+ AKRFIGRKF D V EA ++F + ++ +D F I GH VSP VG H++ QL A +LGH + AVIAVPA FD QRAATVEAF+ AGL+ Sbjct: 21 LARSGYTGKEHSVGIDLGTTYSVVAVNRKGNISVIPDIQGELLLPSIVAFKQAGEVLVGREARQYRSIDPEHTIFNAKRFIGRKF-DQDVVLEAPHYEFALGKDENDT--VCFPITIQGHDTKCVSPITVGYHIVAQLKSSAMAFLGHDQIYSAVIAVPASFDQDQRAATVEAFKKAGLK 197
BLAST of mRNA_L-elsbetiae_contig1422.3137.1 vs. uniprot
Match: W4GY44_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GY44_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.870e-39 Identity = 86/179 (48.04%), Postives = 111/179 (62.01%), Query Frame = 1 Query: 16 LAATGFRGRQTVVGIDLGTTYSVVGVNEAGKITIIPGPGGNPLLPSIVSFLENGRVAVGQDAVELLEHQPANTIYGAKRFIGRKFSDSAVSEEAAEHQFQIIQNNHDLSEAWFEIKRLGHPPTVSPQVVGSHVLGQLLQRAADYLGHSLVSKAVIAVPAKFDARQRAATVEAFRLAGLQ 552 LA +G G++ +VGIDLGTTYSVV VN G +T++P GN LLPSIV+F +G V VG+DA P +TI AKRFIGRKF D+ + +A+ + F ++ N F + GHP VSP +G V+ L + A YLGH + AVIA+PA FDA QR ATV AF AGL+ Sbjct: 22 LARSGHYGKEHLVGIDLGTTYSVVAVNRHGNVTVMPDANGNLLLPSIVAFKPHGGVLVGRDARHHRRVDPKHTISNAKRFIGRKF-DATIEADASLYDFPLLGNTTGDHHVCFGLSVPGHPSCVSPVDIGYFVVKTLKETAMAYLGHDQIYGAVIAIPAGFDANQRKATVAAFERAGLK 199 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1422.3137.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1422.3137.1 >prot_L-elsbetiae_contig1422.3137.1 ID=prot_L-elsbetiae_contig1422.3137.1|Name=mRNA_L-elsbetiae_contig1422.3137.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=184bp GTCAALAATGFRGRQTVVGIDLGTTYSVVGVNEAGKITIIPGPGGNPLLPback to top mRNA from alignment at L-elsbetiae_contig1422:19396..23158- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1422.3137.1 ID=mRNA_L-elsbetiae_contig1422.3137.1|Name=mRNA_L-elsbetiae_contig1422.3137.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3763bp|location=Sequence derived from alignment at L-elsbetiae_contig1422:19396..23158- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1422:19396..23158- >mRNA_L-elsbetiae_contig1422.3137.1 ID=mRNA_L-elsbetiae_contig1422.3137.1|Name=mRNA_L-elsbetiae_contig1422.3137.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1104bp|location=Sequence derived from alignment at L-elsbetiae_contig1422:19396..23158- (Laminarionema elsbetiae ELsaHSoW15)back to top |