mRNA_L-elsbetiae_contig14193.3115.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14193.3115.1 vs. uniprot
Match: D8LN59_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN59_ECTSI) HSP 1 Score: 229 bits (583), Expect = 9.650e-65 Identity = 140/154 (90.91%), Postives = 141/154 (91.56%), Query Frame = 1 Query: 487 GFLGLQGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXKQKKPNGLRRGKWTSEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGGEIG 948 GFLGLQGG XXXXXXXXXXXXXXXXX K KKPNGLRRGKWTSEEE+YANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGGEIG Sbjct: 225 GFLGLQGGASAXXXXXXXXXXXXXXXXXVQA------KAKKPNGLRRGKWTSEEEDYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGGEIG 372
BLAST of mRNA_L-elsbetiae_contig14193.3115.1 vs. uniprot
Match: A0A6H5KTB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTB0_9PHAE) HSP 1 Score: 229 bits (585), Expect = 9.790e-65 Identity = 139/156 (89.10%), Postives = 140/156 (89.74%), Query Frame = 1 Query: 481 GGGFLGLQGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXKQKKPNGLRRGKWTSEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGGEIG 948 G GFLGLQGG XXXXXXXXXXXXXXX K KKPNGLRRGKWTSEEE+YANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGGEIG Sbjct: 312 GSGFLGLQGGSASAMGXXXXXXXXXXXXXXXQA------KAKKPNGLRRGKWTSEEEDYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGGEIG 461
BLAST of mRNA_L-elsbetiae_contig14193.3115.1 vs. uniprot
Match: A0A6U0XNE9_9STRA (Hypothetical protein n=3 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XNE9_9STRA) HSP 1 Score: 201 bits (510), Expect = 2.130e-55 Identity = 105/131 (80.15%), Postives = 110/131 (83.97%), Query Frame = 1 Query: 598 KQKKPNGLRRGKWTSEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKT--------------GGEIG 948 KQKK NGLRRGKWTSEEE YANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRL P DI+RSR +L+DLERRFLERVA T+RCK GGE+G Sbjct: 171 KQKKTNGLRRGKWTSEEENYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLTPEDIDRSRQELSDLERRFLERVAQTSRCKNNALGSKGKDMGPGIGGELG 301
BLAST of mRNA_L-elsbetiae_contig14193.3115.1 vs. uniprot
Match: A0A7S1U7I4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7I4_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.700e-54 Identity = 95/114 (83.33%), Postives = 102/114 (89.47%), Query Frame = 1 Query: 598 KQKKPNGLRRGKWTSEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGG 939 K+ K NGLRRGKWT+EEE YANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRRQADMD+L P +IERSR +LA+LERRFLERVA + R K G Sbjct: 50 KKAKSNGLRRGKWTAEEEAYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQADMDKLSPEEIERSRRELAELERRFLERVAQSTRIKGSG 163
BLAST of mRNA_L-elsbetiae_contig14193.3115.1 vs. uniprot
Match: A0A7S2DAB7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DAB7_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.120e-51 Identity = 95/110 (86.36%), Postives = 101/110 (91.82%), Query Frame = 1 Query: 601 QKKPNGLRRGKWTSEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCK 930 +K +GLRRGKWT EEE YANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRL +IERSR+QL+DLE RFLERVA +NRCK Sbjct: 50 KKSTSGLRRGKWTPEEESYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLSSDEIERSRAQLSDLEHRFLERVAQSNRCK 159
BLAST of mRNA_L-elsbetiae_contig14193.3115.1 vs. uniprot
Match: A0A7S2V6K2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6K2_9STRA) HSP 1 Score: 173 bits (438), Expect = 8.620e-51 Identity = 87/102 (85.29%), Postives = 93/102 (91.18%), Query Frame = 1 Query: 613 NGLRRGKWTSEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMT 918 + LRRGKWT EEE YA RLIQEFKSGLLPL DGTTLRTFLSKLLNC+PMRISKKFVGSNCIGKQVFRRRQADMDRL P +I+RSR +LA+LERRFLERVA T Sbjct: 18 SALRRGKWTPEEEAYATRLIQEFKSGLLPLADGTTLRTFLSKLLNCEPMRISKKFVGSNCIGKQVFRRRQADMDRLTPVEIDRSRQELAELERRFLERVAQT 119
BLAST of mRNA_L-elsbetiae_contig14193.3115.1 vs. uniprot
Match: A0A7R9UAE4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAE4_9STRA) HSP 1 Score: 185 bits (469), Expect = 3.490e-50 Identity = 94/111 (84.68%), Postives = 99/111 (89.19%), Query Frame = 1 Query: 607 KPNGLRRGKWTSEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGG 939 K NGLRRGKWT EEE YANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVG NCIGKQVFRRRQADMD+L P +IERSR +LA+LERRFLERVA + R K G Sbjct: 115 KSNGLRRGKWTVEEEAYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGQNCIGKQVFRRRQADMDKLSPEEIERSRRELAELERRFLERVAQSTRIKGSG 225
BLAST of mRNA_L-elsbetiae_contig14193.3115.1 vs. uniprot
Match: A0A7S4J6Z5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J6Z5_9STRA) HSP 1 Score: 174 bits (440), Expect = 4.460e-50 Identity = 88/110 (80.00%), Postives = 97/110 (88.18%), Query Frame = 1 Query: 619 LRRGKWTSEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGGEIG 948 LRRGKWT EEE YANRLI EFK+GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRR AD++RL P I++SR +L++LERRFLERVA TNR K+ G G Sbjct: 39 LRRGKWTPEEESYANRLILEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRTADINRLTPEQIQQSRQELSELERRFLERVAQTNRVKSSGVGG 148
BLAST of mRNA_L-elsbetiae_contig14193.3115.1 vs. uniprot
Match: A0A7S1D7J8_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7J8_CYCTE) HSP 1 Score: 168 bits (426), Expect = 3.010e-48 Identity = 85/107 (79.44%), Postives = 95/107 (88.79%), Query Frame = 1 Query: 628 GKWTSEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGGEIG 948 GKWT EEE YANRLIQEFK+GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRR AD++RL I++SR++L++LERRFLERVA TNR K+ G G Sbjct: 1 GKWTPEEEAYANRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRTADINRLTSEQIQQSRAELSELERRFLERVAQTNRVKSSGVGG 107
BLAST of mRNA_L-elsbetiae_contig14193.3115.1 vs. uniprot
Match: A0A835YX50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX50_9STRA) HSP 1 Score: 182 bits (463), Expect = 4.430e-48 Identity = 91/115 (79.13%), Postives = 102/115 (88.70%), Query Frame = 1 Query: 604 KKPNGLRRGKWTSEEEEYANRLIQEFKSGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQADMDRLQPADIERSRSQLADLERRFLERVAMTNRCKTGGEIG 948 KK +GLRRGKWT+EEE YANRLI EFK+GLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQ ++D+L D+ERSR++L DLER+FLERVA TN+CK G G Sbjct: 182 KKSSGLRRGKWTTEEEAYANRLIHEFKNGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRQCEIDKLTQEDMERSRNELQDLERQFLERVAQTNKCKGGAPGG 296 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14193.3115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14193.3115.1 >prot_L-elsbetiae_contig14193.3115.1 ID=prot_L-elsbetiae_contig14193.3115.1|Name=mRNA_L-elsbetiae_contig14193.3115.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=316bp QQQQQQQRPTSHAPAPATATTAAAASAAPTTAQIAAAAAAAAQANTVATAback to top mRNA from alignment at L-elsbetiae_contig14193:805..4194+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14193.3115.1 ID=mRNA_L-elsbetiae_contig14193.3115.1|Name=mRNA_L-elsbetiae_contig14193.3115.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3390bp|location=Sequence derived from alignment at L-elsbetiae_contig14193:805..4194+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14193:805..4194+ >mRNA_L-elsbetiae_contig14193.3115.1 ID=mRNA_L-elsbetiae_contig14193.3115.1|Name=mRNA_L-elsbetiae_contig14193.3115.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1896bp|location=Sequence derived from alignment at L-elsbetiae_contig14193:805..4194+ (Laminarionema elsbetiae ELsaHSoW15)back to top |