prot_L-elsbetiae_contig1418.3107.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1418.3107.1
Unique Nameprot_L-elsbetiae_contig1418.3107.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length253
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1418.3107.1 vs. uniprot
Match: A0A6H5KTQ0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTQ0_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 9.120e-60
Identity = 113/160 (70.62%), Postives = 131/160 (81.88%), Query Frame = 0 
Query:   34 ANGDGAWSVASIWADMVGSATDTKAKVDSTAADVYSELRRKVLVKKERQSLEGQLSSLIRIEGNSMSCKAEDCVRRLASELEALQDNAAAW-PQKTGLAGSWKLIYSSANCGNKAKGGGGSSSKDRLTSIEDISYVSENYRLSHS-DDSVLRVYRRVDAP 191
            ANG+G WS+A++W D+VG A + KAKVDSTAA+VY EL++KVLVKKERQSLEGQLSSLIRIEGNSMSCK +DCVRRLA+ELE+LQDNAA +  QK+GL GSWKLIYS A C  K  G GG    DRL +IE ISYVSENYRLSHS ++  LRVY+RV  P
Sbjct:   54 ANGEGPWSIATLWRDVVGPAMN-KAKVDSTAAEVYHELKKKVLVKKERQSLEGQLSSLIRIEGNSMSCKKQDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSRAACEGKGGGRGG----DRLPTIEVISYVSENYRLSHSGEEDDLRVYKRVSPP 208
[Close]
BLAST of mRNA_L-elsbetiae_contig1418.3107.1 vs. uniprot
Match: D7G1W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W5_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 2.590e-27
Identity = 107/156 (68.59%), Postives = 120/156 (76.92%), Query Frame = 0 
Query:   99 MSCKAEDCVRRLASELEALQDNAAAW-PQKTGLAGSWKLIYSSANCGNKAKGGGGSSSKDRLTSIEDISYVSENYRLSHS-DDSVLRVYRRVDAPARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSGVRLAKQPLRKRMFFGFLRR 252
            +  +  DCVRRLA+ELE+LQDNAA +  QK+GL GSWKLIYSSA C    +G GG    DRLT+IEDISYVSENYRLSHS +   LRVY+RV  P    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  G    ++K PLR+R FFGFLRR
Sbjct:    5 LDSQKRDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSSAAC----EGNGGGRGGDRLTTIEDISYVSENYRLSHSGEQDDLRVYKRVSPPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRG----VSKLPLRRRTFFGFLRR 152
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1418.3107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTQ0_9PHAE9.120e-6070.63Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G1W5_ECTSI2.590e-2768.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1418contigL-elsbetiae_contig1418:20438..25316 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1418.3107.1mRNA_L-elsbetiae_contig1418.3107.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1418 20438..25316 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1418.3107.1 ID=prot_L-elsbetiae_contig1418.3107.1|Name=mRNA_L-elsbetiae_contig1418.3107.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=253bp
SAFVVPGPSTFTHQNTELRSTSSSAIRGMSMSAANGDGAWSVASIWADMV
GSATDTKAKVDSTAADVYSELRRKVLVKKERQSLEGQLSSLIRIEGNSMS
CKAEDCVRRLASELEALQDNAAAWPQKTGLAGSWKLIYSSANCGNKAKGG
GGSSSKDRLTSIEDISYVSENYRLSHSDDSVLRVYRRVDAPARAAATAAA
AAGDDTMAAGASAEGGKKKAGRAAAAAAATGSGVRLAKQPLRKRMFFGFL
RR*
back to top