mRNA_L-elsbetiae_contig14179.3105.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A6H5L486_9PHAE (TMP-TENI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L486_9PHAE) HSP 1 Score: 336 bits (861), Expect = 1.240e-110 Identity = 196/296 (66.22%), Postives = 220/296 (74.32%), Query Frame = 1 Query: 175 LAVLLPAHGVEALLPVGGGNNMYR---RARPSGVTEQGPTPASDSKLCSVHTERDGDRNAPAQLCAPVLELITPDGCASLSTSDISSLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVGRLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSLAASCRAGSRVDG 1053 L VL+ A E+LL G+ R A +G PT + L + E D P L P+LELITPDGCAS S S+ SSL++NI++AV GGVSLVQLRDY+SGAKSKA++AVR+ A KGRAL VVNG+P+ ARA+GADGVHLPERMMD RLVG R GEWPRIVGCSVHSVAAAV+AARLGADY+QVGTMFATQSHPGK PEG+ MLNDVRRQLQ E L VLV+GVGGIDASNCG VV AGGDGVAAIRCLC SSDAEG+AR IVQDMR S AGSR G Sbjct: 40 LLVLVGASTGESLLLSMAGSPYPRGCTTACAAGAAAS-PTRKGGAPLNGLGNEVAQDDATP--LAPPLLELITPDGCASSSFSETSSLVKNIQKAVAGGVSLVQLRDYKSGAKSKADLAVRISTALKGRALFVVNGEPDTARANGADGVHLPERMMD---RLVGLRGQGEWPRIVGCSVHSVAAAVEAARLGADYVQVGTMFATQSHPGKTPEGVGMLNDVRRQLQVEGLDVVLVLGVGGIDASNCGDVVAAGGDGVAAIRCLCSSSDAEGQARRIVQDMRNS------AGSRFAG 323
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A836CN05_9STRA (Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN05_9STRA) HSP 1 Score: 181 bits (459), Expect = 4.010e-51 Identity = 117/231 (50.65%), Postives = 152/231 (65.80%), Query Frame = 1 Query: 364 PVLELITPDGCASLSTSDISSLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGR-ALLVVNGDPEAARASGADGVHLPERMMDMVGRLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQL-QAE---DLS--HVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFS--SDAEGEARSIVQDMRGSLAASC 1029 PVLELITPDG A+ ++ ++ IR AV GGV LVQ+RD S A+SK +A +L +V+NG +AA A GA GVHLPER++ V R A E +VGCSVHSV AAV AARLGADY+QVGTMFATQ+HPGK PEG Q+L +R L QA +LS VL++GVGGI+ +NC +V+ AGGDGVAAIR LC + SD A++++ ++ + +C Sbjct: 42 PVLELITPDGSAAQPSTHLAQKIR---AAVSGGVRLVQIRDTTSSAESKHALATQLLLDLAAEPCCIVLNGGVDAALACGAHGVHLPERLLPEVTR------AREALAVVGCSVHSVEAAVAAARLGADYLQVGTMFATQTHPGKVPEGPQLLAAIRAALNQAHARGELSDKRVLLLGVGGINEANCAQVIQAGGDGVAAIRSLCGADGSDPRAVAQALLAALQSAATPAC 263
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A7S3XPQ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPQ6_HETAK) HSP 1 Score: 139 bits (350), Expect = 1.560e-34 Identity = 96/234 (41.03%), Postives = 130/234 (55.56%), Query Frame = 1 Query: 364 PVLELITPDGCASLSTSDISS--LIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLY-AATKGRALLVVNGDPEAARASGADGVHLPE-RMMDMVGRLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQL-----QAEDLSHV-----LVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSLAA 1023 P L LITP+G + S+ + ++ I AVEGGVSLVQLRD + + A M R+ + A+ +VNGD + A A ADGVHLPE ++ D + + G ++GCSVHS AA++A + ADYI VGTMF T SHPGK PEG + L ++ + +D + LV GVGGID NC +V+ GGDGVA I LCF+ + +A + M L A Sbjct: 4 PFLCLITPEGLCTEKYSEEAKRIILSRIGLAVEGGVSLVQLRDKTATREELATMGKRIRDVVDRSSAIFMVNGDLDVAIACKADGVHLPEAQVQDFINSYKNKKFNG----VLGCSVHSSEAALRAMEVKADYIVVGTMFKTNSHPGKVPEGPESLKKIKLDMLDHSQNTKDSNGAEEKLPLVCGVGGIDGDNCIEVLKNGGDGVAMISTLCFADRPKDKAEEVTGFMAAFLTA 233
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A2H5YM77_9BACT (Thiamine-phosphate synthase n=1 Tax=bacterium HR25 TaxID=2035420 RepID=A0A2H5YM77_9BACT) HSP 1 Score: 134 bits (337), Expect = 8.000e-34 Identity = 89/208 (42.79%), Postives = 125/208 (60.10%), Query Frame = 1 Query: 424 SLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVG--RLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSLAASCRAGS 1041 SL + RAV GGV +VQLR+ + A +A+ L AT+GR+LLVVN + A A+GADG+HLPER + + RL+G R+VG SVHS+A AV+AA GADY+ VG+++AT+SHPG P GL +L +V ++ V+ +GGI A +VV AG GVA I + +AE AR + + +R + + RAGS Sbjct: 13 SLTARVARAVAGGVDIVQLRERDMPAGELLSLALELREATEGRSLLVVNDRADVALAAGADGLHLPERGLPVAAARRLLGEG------RLVGRSVHSLAEAVRAAEEGADYLVVGSIYATRSHPGASPAGLGLLREVAARVSLP------VLAIGGITAERVAEVVQAGASGVAVISAVLGQPEAEEAARRLGRALRQAWS---RAGS 205
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A2H5YGE0_9BACT (Thiamine-phosphate synthase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5YGE0_9BACT) HSP 1 Score: 126 bits (316), Expect = 1.180e-30 Identity = 89/212 (41.98%), Postives = 119/212 (56.13%), Query Frame = 1 Query: 364 PVLELITPDGCASLSTSDISSLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVG--RLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSI 993 P L L+T A L ++ RAV GGV++VQLR+ + A+ +A L AA GRALLVVN + A A+GADGVHLPE + + RLVGP R+VG SVHSV AAV+A GADYI VG ++ T+SHP G +L+ VRR ++ V V+ +GG+ A+ + + AG GVA I + S D E AR + Sbjct: 12 PCLMLVTDRSLAPLPLPQAAA------RAVAGGVNIVQLREKDLPARDLLALAAALRAAIAGRALLVVNDRADVALAAGADGVHLPEDGLPVAKARRLVGPA------RLVGRSVHSVDAAVRAEADGADYIVVGPIYPTRSHPDAPAAGPGLLSQVRRAVR------VPVLAIGGVTAATAAEXLAAGASGVAVISAILGSEDPEAAARGL 205
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A7X3VB43_9CHLR (Thiamine-phosphate synthase n=2 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X3VB43_9CHLR) HSP 1 Score: 122 bits (305), Expect = 4.380e-29 Identity = 92/234 (39.32%), Postives = 128/234 (54.70%), Query Frame = 1 Query: 352 QLCAPVLELITPDGCASLSTSDISSLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVG--RLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSLAASCRAGSRV 1047 +L P L L+T G ++ DI + R AV GGV +VQLRD + A +A L + T+GRALL+VN + A SGADGV L E +D RLVG ++G SVHSV AVKA GAD++ +GT+F T SHPG + GL+++ DV D + VIG+GGI SN +V +G G A I + ++D + + +I++ MR A SC A R+ Sbjct: 4 KLPLPCLCLVTDRG--RTASDDIVNTARG---AVAGGVGMVQLRDKDCPAAEMLSLARELRSVTEGRALLIVNDRVDIALLSGADGVQLGENGLDAASARRLVGSE------MLIGRSVHSVEGAVKAESSGADFLVLGTIFETASHPGADTGGLKLVRDVT------DRIGIPVIGIGGISKSNVAGLVESGAAGAAVITAVSMAADPKAASLNILEAMRH--AYSCVAELRL 218
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A2D9ZQG9_9CHLR (Thiamine-phosphate synthase n=4 Tax=root TaxID=1 RepID=A0A2D9ZQG9_9CHLR) HSP 1 Score: 120 bits (301), Expect = 1.310e-28 Identity = 70/193 (36.27%), Postives = 114/193 (59.07%), Query Frame = 1 Query: 439 IERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVGRLVGPRDAGEWPR--IVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRG 1011 + +AVEGGV+++Q RD + + AV+L T+ +AL +VNGD + A+ + ADG+H PE+ V D + I+G SVHS+ A+KA G DY+ VGT+F ++SHP + G +++ D+ R+L V +IG+GGI + NC +V+ +G GVA I + + D + E+R I++++ G Sbjct: 29 VSQAVEGGVNMIQFRDTDMHXTERLHXAVKLREITESKALFIVNGDIDLAKKAXADGIHFPEKH-------VXXADTEKLKENFILGKSVHSLEMAIKAVSAGIDYLIVGTIFPSKSHPQGQASGTKLIEDISRKLS------VPLIGIGGISSKNCQEVIDSGASGVAVIGAISEADDPKLESRIILENISG 208
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A2E9LMX6_9CHLR (Thiamine-phosphate synthase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E9LMX6_9CHLR) HSP 1 Score: 120 bits (301), Expect = 2.240e-28 Identity = 84/224 (37.50%), Postives = 124/224 (55.36%), Query Frame = 1 Query: 364 PVLELITPDGCASLSTSDISSLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVGRLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSLAASCRA 1035 P L L+T A SL+ + +AV+GGV+LVQLRD A E+AV L G+A L+VN + ARA+GADGV L E + + R GE ++G SVHS+++A+ A GAD++ VGTM+A++SHPG+ P G ++ D+ Q + +IG+GGI N +++ AG GVA I + +SD RS + M+ L AS ++ Sbjct: 15 PYLCLVTDPAVAG------DSLLERVVQAVQGGVNLVQLRDKTLPAGRLLELAVPLLEVMDGKAKLIVNDRADVARAAGADGVQLGEEGLPVAAAR---RSLGEG-LLIGRSVHSLSSALTAEADGADFLLVGTMYASRSHPGEPPAGPGLMRDISEQCRLP------LIGIGGITPENADEIIQAGASGVAVITNILAASDP----RSAAEKMKEILLASWKS 218
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A2E8X697_9CHLR (Thiamine-phosphate synthase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2E8X697_9CHLR) HSP 1 Score: 119 bits (299), Expect = 2.680e-28 Identity = 78/219 (35.62%), Postives = 119/219 (54.34%), Query Frame = 1 Query: 361 APVLELITPDGCASLSTSDISSLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVGRLVGPRDAGEWPRIVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSL 1017 +P+L L+T S D+ +++ + A+ GGV+++Q RD + K EMA+ L T+ +A+ VVNGD + A+ GADG+H PE M + +D I+G SVHS AA KA G DY+ VGT+F + SHP E G +++ DV + L + VIG+GGI + NC +V+ AG GVA I + + + A I + + S+ Sbjct: 8 SPILCLVTNRN--RTSRRDLGTIVSD---AISGGVNMIQFRDKDMEGPEKLEMAINLRGLTRDKAIFVVNGDVDLAKQVGADGIHFPENMXSGIDFQELKKDF-----IIGKSVHSFDAATKAYFEGMDYLTVGTIFPSVSHPNGEVSGPEIIXDVTKNLS------IPVIGIGGISSENCIEVMKAGAAGVAVIGAISEAVSPKSAAXDIFEILESSI 210
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Match: A0A8J2X006_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X006_9STRA) HSP 1 Score: 126 bits (317), Expect = 3.500e-28 Identity = 97/258 (37.60%), Postives = 131/258 (50.78%), Query Frame = 1 Query: 370 LELITPDGCASLSTSDISSLIRNIERAVEGGVSLVQLRDYESGAKSKAEMAVRLYAATKGRALLVVNGDPEAARASGADGVHLPERMMDMVGRLVGPRDAGEWPR-IVGCSVHSVAAAVKAARLGADYIQVGTMFATQSHPGKEPEGLQMLNDVRRQLQAEDLSHVLVIGVGGIDASNCGKVVTAGGDGVAAIRCLCFSSDAEGEARSIVQDMRGSLAASCRAGSRVDGVR*RILGCRFAGKPNQQNTARQKIDLREV 1140 L +TP G A+ + L R A +GG SLVQLRD ++ A + A +G VV E HLPER R A E P +GCS HSV A + AA LGADY+Q+GTMFATQ+HPGK PEG + + RR L + + L+IGVGG+DA+N K++ AG DGVA IR + + D E AR+I + + G AG+R+ + A + TA+ D+RE+ Sbjct: 56 LVFVTPPGWAAADRR--ADLERVARAAAKGGASLVQLRDADASRDELQSAAAAVRDALQGTDCSVVINGVE----------HLPERKW---------RAATERPNGPLGCSAHSVEAVLAAAALGADYVQLGTMFATQTHPGKIPEGPGLATECRRALDERE-APPLLIGVGGVDATNAAKLIEAGCDGVAVIRGISDARDPEAAARAICRALAG-------AGTRIS---------KAAQNTRAETTAQNAADVREL 275 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14179.3105.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14179.3105.1 >prot_L-elsbetiae_contig14179.3105.1 ID=prot_L-elsbetiae_contig14179.3105.1|Name=mRNA_L-elsbetiae_contig14179.3105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=305bp MACLGRCLSLAVLLPAHGVEALLPVGGGNNMYRRARPSGVTEQGPTPASDback to top mRNA from alignment at L-elsbetiae_contig14179:1156..3367- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14179.3105.1 ID=mRNA_L-elsbetiae_contig14179.3105.1|Name=mRNA_L-elsbetiae_contig14179.3105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2212bp|location=Sequence derived from alignment at L-elsbetiae_contig14179:1156..3367- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14179:1156..3367- >mRNA_L-elsbetiae_contig14179.3105.1 ID=mRNA_L-elsbetiae_contig14179.3105.1|Name=mRNA_L-elsbetiae_contig14179.3105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1830bp|location=Sequence derived from alignment at L-elsbetiae_contig14179:1156..3367- (Laminarionema elsbetiae ELsaHSoW15)back to top |