mRNA_L-elsbetiae_contig1417.3098.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1417.3098.1
Unique NamemRNA_L-elsbetiae_contig1417.3098.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1417.3098.1 vs. uniprot
Match: D7FIH1_ECTSI (Eukaryotic translation initiation factor 4E like2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIH1_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 1.950e-133
Identity = 192/226 (84.96%), Postives = 203/226 (89.82%), Query Frame = 3 
Query:  378 MAERKANVSEESS------------GEHALQTGWSFWYDKKMPKKTQDQTQYQASLHKAGSFNTVEGFWKNYVHLKRPSNISTNVNVYLFRDEQGHVPMWERYPNGGCWILRIRKKAGQTNTSVLGKMWQDLVLAVIGEMFEEPNVVGIGMAIRSREDLLSVWNEDNSNDKVRFNIGERLKQVLDLEPSTLIEYKHHQIAMQDMSTFRNAKAYVFSQSQAQS*NHQ 1019
            MAERKA  S +++            GEHALQTGWSFWYDKKMPKKTQDQTQYQASLHKAGSFNT+EGFWKNYVHLKRPSNIS NVNVYLFRDE+GHVPMWERYPNGGCWILRIRKK+GQTNTSVLGKMWQDLVLAV+GEMFEEPNVVGIGMAIRSREDLLSVWNEDNSN+KVRFNIGERLKQVLDLEPSTLIEYKHHQ AMQDMSTFRNAKAY F+ ++ QS   Q
Sbjct:    1 MAERKAGQSGDNASTEQQQPGLLPNGEHALQTGWSFWYDKKMPKKTQDQTQYQASLHKAGSFNTLEGFWKNYVHLKRPSNISINVNVYLFRDERGHVPMWERYPNGGCWILRIRKKSGQTNTSVLGKMWQDLVLAVVGEMFEEPNVVGIGMAIRSREDLLSVWNEDNSNEKVRFNIGERLKQVLDLEPSTLIEYKHHQTAMQDMSTFRNAKAYCFAVTKGQSQTQQ 226
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BLAST of mRNA_L-elsbetiae_contig1417.3098.1 vs. uniprot
Match: A0A836CBD6_9STRA (Putative eukaryotic initiation factor 4E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBD6_9STRA)

HSP 1 Score: 266 bits (681), Expect = 5.930e-83
Identity = 125/196 (63.78%), Postives = 153/196 (78.06%), Query Frame = 3 
Query:  420 EHALQTGWSFWYDKKMPKK-TQDQTQYQASLHKAGSFNTVEGFWKNYVHLKRPSNISTNVNVYLFRDEQGHVPMWERYPNGGCWILRIRKKAGQTNTSVLGKMWQDLVLAVIGEMFEEPNVVGIGMAIRSREDLLSVWNEDNS-NDKVRFNIGERLKQVLDLEPSTLIEYKHHQIAMQDMSTFRNAKAYVFSQSQA 1001
            +H LQT W FWYDKK  K  T D  +Y+A+LHK  +F+TVE FW+ Y H+KRPS +  N+N+Y FRD     P WE +PNGGCWIL+I+K+A  + TSVLGKMWQDLV A IGE FEEP VVG+GMA+RS+EDLLSVWN DNS ND VRF IGE+LK +LDLEPST+IEYKH   +M+DMST+R+AK YVF+ +QA
Sbjct:   33 QHKLQTSWCFWYDKKHKKGGTGDYNEYKANLHKVHTFSTVEDFWRLYTHIKRPSALENNINMYFFRDAPNSSPSWESFPNGGCWILKIKKRA-HSGTSVLGKMWQDLVFAAIGECFEEPTVVGVGMAVRSKEDLLSVWNSDNSGNDAVRFAIGEKLKAILDLEPSTMIEYKHFASSMEDMSTYRHAKPYVFAAAQA 227
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BLAST of mRNA_L-elsbetiae_contig1417.3098.1 vs. uniprot
Match: A0A024TXL0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TXL0_9STRA)

HSP 1 Score: 263 bits (671), Expect = 7.480e-82
Identity = 120/192 (62.50%), Postives = 155/192 (80.73%), Query Frame = 3 
Query:  420 EHALQTGWSFWYDKKMPKKTQDQTQYQASLHKAGSFNTVEGFWKNYVHLKRPSNISTNVNVYLFRDEQGHVPMWERYPNGGCWILRIRKKAGQTNTSVLGKMWQDLVLAVIGEMFEEPNVVGIGMAIRSREDLLSVWNEDNSNDKVRFNIGERLKQVLDLEPSTLIEYKHHQIAMQDMSTFRNAKAYVFSQS 995
            EH LQTGWS W+DKKMPK+T D + YQ++L K  +FNTVE FW++Y+H+KRPS ++ + N+YLFRD+    PMWE +PNGGCWIL+I+KKA     +VLGKMWQDL+ AVIGE FE  NVVGI MA+RS+ED++SVWN DNS+D +RF IGE+LK++L L+ +TLIEYK H  +++DMSTFRNAK YVF+ S
Sbjct:   14 EHQLQTGWSLWFDKKMPKRT-DVSTYQSNLQKIANFNTVEDFWRHYIHVKRPSQLAKDTNLYLFRDQPNCAPMWEAFPNGGCWILKIKKKA-----NVLGKMWQDLLFAVIGEAFETLNVVGIAMALRSKEDMISVWNADNSDDNIRFAIGEKLKEILMLDSNTLIEYKFHANSIRDMSTFRNAKPYVFAAS 199
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BLAST of mRNA_L-elsbetiae_contig1417.3098.1 vs. uniprot
Match: F0W9A8_9STRA (Eukaryotic initiation factor 4E putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W9A8_9STRA)

HSP 1 Score: 261 bits (668), Expect = 2.570e-81
Identity = 122/204 (59.80%), Postives = 158/204 (77.45%), Query Frame = 3 
Query:  378 MAERKANVSEESSGEHALQTGWSFWYDKKMPKKTQDQTQYQASLHKAGSFNTVEGFWKNYVHLKRPSNISTNVNVYLFRDEQGHVPMWERYPNGGCWILRIRKKAGQTNTSVLGKMWQDLVLAVIGEMFEEPNVVGIGMAIRSREDLLSVWNEDNSNDKVRFNIGERLKQVLDLEPSTLIEYKHHQIAMQDMSTFRNAKAYVFS 989
            M E K    +  S EH L TGWSFWYDKK+P+   D   Y+++LH+  +F+TVE FW++YVHLKRPS +  ++N+Y+FRD     PMWE +P+GGCWIL+I+KKA     +VLGKMWQDLV A IGE+F + NVVGI MAIRS+ED+LSVWN DNS D VRF+IGE+LK++L L+P+TLIEYK H  +++DMSTFRNAK+YVF+
Sbjct:    1 MTEGKELEHQMESREHPLHTGWSFWYDKKLPRNV-DVGTYRSNLHRIATFSTVEDFWRHYVHLKRPSELHRDINLYMFRDLPKCAPMWEAFPHGGCWILKIKKKA-----NVLGKMWQDLVFAAIGELFGQANVVGIAMAIRSKEDMLSVWNADNSEDSVRFSIGEKLKEILMLDPNTLIEYKFHANSIRDMSTFRNAKSYVFA 198
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BLAST of mRNA_L-elsbetiae_contig1417.3098.1 vs. uniprot
Match: W2PGT1_PHYPN (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=W2PGT1_PHYPN)

HSP 1 Score: 261 bits (667), Expect = 4.750e-81
Identity = 124/204 (60.78%), Postives = 156/204 (76.47%), Query Frame = 3 
Query:  378 MAERKANVSEESSGEHALQTGWSFWYDKKMPKKTQDQTQYQASLHKAGSFNTVEGFWKNYVHLKRPSNISTNVNVYLFRDEQGHVPMWERYPNGGCWILRIRKKAGQTNTSVLGKMWQDLVLAVIGEMFEEPNVVGIGMAIRSREDLLSVWNEDNSNDKVRFNIGERLKQVLDLEPSTLIEYKHHQIAMQDMSTFRNAKAYVFS 989
            +A   A V +    EH LQTGWS WYDKKMPKK  D   YQ++L K  +FNTVE FW++Y+H+KRPS +S +VN+YLFRD+    PMWE +P GGCWIL+I+KKA     +VLGKMWQDLV A IGE FE+ +VVGI MAIRS+ED+LSVWN DNS+D  RF IGE+LK++L L+ +TL+EYK H  +++DMSTFRNAK YVF+
Sbjct:   11 VAAAPAIVEKGEEEEHPLQTGWSLWYDKKMPKKI-DVGTYQSNLQKIATFNTVEDFWRHYIHVKRPSQLSRDVNLYLFRDQPNCAPMWEAFPQGGCWILKIKKKA-----NVLGKMWQDLVFAAIGEAFEQLDVVGIAMAIRSKEDMLSVWNADNSDDNTRFAIGEKLKEILMLDSNTLVEYKFHANSIRDMSTFRNAKPYVFA 208
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BLAST of mRNA_L-elsbetiae_contig1417.3098.1 vs. uniprot
Match: A0A8K1CP93_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP93_PYTOL)

HSP 1 Score: 260 bits (665), Expect = 7.720e-81
Identity = 119/195 (61.03%), Postives = 153/195 (78.46%), Query Frame = 3 
Query:  405 EESSGEHALQTGWSFWYDKKMPKKTQDQTQYQASLHKAGSFNTVEGFWKNYVHLKRPSNISTNVNVYLFRDEQGHVPMWERYPNGGCWILRIRKKAGQTNTSVLGKMWQDLVLAVIGEMFEEPNVVGIGMAIRSREDLLSVWNEDNSNDKVRFNIGERLKQVLDLEPSTLIEYKHHQIAMQDMSTFRNAKAYVFS 989
            E+   EH LQTGW  WYDKK+PKK  D   YQ++L K  +F+TVE FW++Y+H+KRPS ++ +VN+YLFRD     PMWE +PNGGCWIL+I+KKA     +VLGKMWQDLV A +GE FEE +VVGI MAIRS+ED++SVWN DNSN++ RF IGE+LK++L L+ +TLIEYK H  +++DMSTFRNAK YVF+
Sbjct:   16 EQQDAEHPLQTGWCIWYDKKLPKKI-DVGTYQSNLQKIAAFSTVEDFWRHYIHIKRPSQLNRDVNLYLFRDRPNCAPMWEAFPNGGCWILKIKKKA-----NVLGKMWQDLVFAAVGEAFEELDVVGIAMAIRSKEDMISVWNADNSNEETRFKIGEKLKEILMLDANTLIEYKFHANSIKDMSTFRNAKPYVFA 204
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BLAST of mRNA_L-elsbetiae_contig1417.3098.1 vs. uniprot
Match: K3WZ97_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WZ97_GLOUD)

HSP 1 Score: 256 bits (654), Expect = 2.780e-79
Identity = 119/195 (61.03%), Postives = 151/195 (77.44%), Query Frame = 3 
Query:  405 EESSGEHALQTGWSFWYDKKMPKKTQDQTQYQASLHKAGSFNTVEGFWKNYVHLKRPSNISTNVNVYLFRDEQGHVPMWERYPNGGCWILRIRKKAGQTNTSVLGKMWQDLVLAVIGEMFEEPNVVGIGMAIRSREDLLSVWNEDNSNDKVRFNIGERLKQVLDLEPSTLIEYKHHQIAMQDMSTFRNAKAYVFS 989
            E +  EH L+TGW+ WYDKK+PKK  D   YQ++L K   FNTVE FW++Y+H+KRPS +S +VN+YLFRD+    PMWE +P GGCWIL+I+KKA     +VLGKMWQDLV A IGE+F   +VVGI MAIRS+ED+LSVWN DNS+D  RF IGE+LK++L L+ +TLIEYK H  +++DMSTFRNAK YVF+
Sbjct:   13 EVADEEHPLETGWALWYDKKLPKKI-DVGTYQSNLQKIAQFNTVEDFWRHYIHVKRPSQLSRDVNLYLFRDQPNCAPMWEAFPQGGCWILKIKKKA-----NVLGKMWQDLVFAAIGEVFASRDVVGIAMAIRSKEDMLSVWNADNSDDSTRFEIGEKLKEILMLDSNTLIEYKFHANSIRDMSTFRNAKPYVFA 201
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BLAST of mRNA_L-elsbetiae_contig1417.3098.1 vs. uniprot
Match: A0A067BS98_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BS98_SAPPC)

HSP 1 Score: 256 bits (653), Expect = 3.790e-79
Identity = 122/208 (58.65%), Postives = 156/208 (75.00%), Query Frame = 3 
Query:  378 MAERKANVSEESSG--EHALQTGWSFWYDKKMPKKTQDQTQYQASLHKAGSFNTVEGFWKNYVHLKRPSNISTNVNVYLFRDEQGHVPMWERYPNGGCWILRIRKKAGQTNTSVLGKMWQDLVLAVIGEMFEEPNVVGIGMAIRSREDLLSVWNEDNSNDKVRFNIGERLKQVLDLEPSTLIEYKHHQIAMQDMSTFRNAKAYVFSQS 995
            MA   A V  E++   EH+LQTGW  WYD+K+PK+T D   YQ++L K  +F TVE FW++YVH+KRPS ++ + N+YLFRD     PMWE +PNGGCWIL+I+KKA     +VLGKMWQDL  A +GE FE  NVVGI MAIRS+ED++SVWN DN++D  RF IGE+LK++L L+ +TLIEYK H  +++DMSTFRNAK YVFS S
Sbjct:    1 MAATDAQVKHEAAADEEHSLQTGWCLWYDRKLPKRT-DLDTYQSNLQKIAAFGTVEDFWRHYVHVKRPSQLNKDTNLYLFRDAPNCAPMWEAFPNGGCWILKIKKKA-----NVLGKMWQDLCFAAVGEAFETLNVVGIAMAIRSKEDMISVWNADNTDDSARFAIGEKLKELLMLDSNTLIEYKFHSNSIRDMSTFRNAKPYVFSAS 202
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BLAST of mRNA_L-elsbetiae_contig1417.3098.1 vs. uniprot
Match: A0A6V1NUK3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NUK3_HETAK)

HSP 1 Score: 254 bits (649), Expect = 4.220e-78
Identity = 116/191 (60.73%), Postives = 151/191 (79.06%), Query Frame = 3 
Query:  417 GEHALQTGWSFWYDKKMPKKTQDQTQYQASLHKAGSFNTVEGFWKNYVHLKRPSNISTNVNVYLFRDEQGHVPMWERYPNGGCWILRIRKKAGQTNTSVLGKMWQDLVLAVIGEMFEEPNVVGIGMAIRSREDLLSVWNEDNSNDKVRFNIGERLKQVLDLEPSTLIEYKHHQIAMQDMSTFRNAKAYVFS 989
            GEHALQTGW FWYDKK+ K   D  +Y++ LH  G+F+TVEGFW+ YVHLKRP+ +  N N++LFR  + +VPMWE +P GGCWIL++RK    +  SVL K+W DLVLAVIGE F EP+VVGIG+++R+REDLLSVWN DN+N+ VRF IGE+LK +L LE +T+IEYK  + ++QDMS++RNAK YVF+
Sbjct:   38 GEHALQTGWCFWYDKKLQKNA-DLNEYKSHLHNLGAFHTVEGFWRYYVHLKRPAALEVNTNLHLFRHGEQYVPMWEAFPKGGCWILKLRKTP--SGPSVLSKLWHDLVLAVIGEAFAEPDVVGIGLSVRAREDLLSVWNGDNTNNDVRFLIGEKLKTILGLEENTMIEYKTFKASLQDMSSYRNAKPYVFA 225
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BLAST of mRNA_L-elsbetiae_contig1417.3098.1 vs. uniprot
Match: H3GYW7_PHYRM (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=H3GYW7_PHYRM)

HSP 1 Score: 253 bits (645), Expect = 1.560e-77
Identity = 124/219 (56.62%), Postives = 157/219 (71.69%), Query Frame = 3 
Query:  378 MAERKANVSEESSGEHALQTGWSFWYDKKMPKKT------------QDQTQ---YQASLHKAGSFNTVEGFWKNYVHLKRPSNISTNVNVYLFRDEQGHVPMWERYPNGGCWILRIRKKAGQTNTSVLGKMWQDLVLAVIGEMFEEPNVVGIGMAIRSREDLLSVWNEDNSNDKVRFNIGERLKQVLDLEPSTLIEYKHHQIAMQDMSTFRNAKAYVFS 989
            +A   A V +    EH LQTGWS WYDKKMPKK             +D      YQ++L K  +FNTVE FW++Y+H+KRPS +S +VN+YLFRD+    PMWE +P GGCWIL+I+KKA     +VLGKMWQDLV A +GE FEE +VVGI MAIRS+ED+LSVWN DNS+D  RF IGE+LK++L L+ +TL+EYK H  +++DMSTFRNAK YVF+
Sbjct:   11 VAAAPAIVEKGEEEEHPLQTGWSLWYDKKMPKKIDVGEVGGEFAAHEDFVACRTYQSNLQKIANFNTVEDFWRHYIHVKRPSQLSRDVNLYLFRDQPNCAPMWEAFPQGGCWILKIKKKA-----NVLGKMWQDLVFAALGEAFEELDVVGIAMAIRSKEDMLSVWNADNSDDSTRFAIGEKLKEILMLDSNTLVEYKFHANSIRDMSTFRNAKPYVFA 224
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1417.3098.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIH1_ECTSI1.950e-13384.96Eukaryotic translation initiation factor 4E like2 ... [more]
A0A836CBD6_9STRA5.930e-8363.78Putative eukaryotic initiation factor 4E n=1 Tax=T... [more]
A0A024TXL0_9STRA7.480e-8262.50Uncharacterized protein n=3 Tax=Aphanomyces TaxID=... [more]
F0W9A8_9STRA2.570e-8159.80Eukaryotic initiation factor 4E putative n=1 Tax=A... [more]
W2PGT1_PHYPN4.750e-8160.78Uncharacterized protein n=22 Tax=Peronosporaceae T... [more]
A0A8K1CP93_PYTOL7.720e-8161.03Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WZ97_GLOUD2.780e-7961.03Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
A0A067BS98_SAPPC3.790e-7958.65Uncharacterized protein n=5 Tax=Saprolegniaceae Ta... [more]
A0A6V1NUK3_HETAK4.220e-7860.73Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
H3GYW7_PHYRM1.560e-7756.62Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1417contigL-elsbetiae_contig1417:6690..13015 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score396.4
Seed ortholog evalue8.6e-108
Seed eggNOG ortholog2880.D7FIH1
KEGG koko:K03259
KEGG Pathwayko01521,ko03013,ko04066,ko04150,ko04151,ko04211,ko04910,map01521,map03013,map04066,map04150,map04151,map04211,map04910
KEGG ModuleM00428
Hectar predicted targeting categoryother localisation
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5053@1,KOG1669@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03012,ko03019
Ec32 ortholog descriptioneukaryotic translation initiation factor 4E like2
Ec32 orthologEc-28_000250.1
Exons7
Model size1616
Cds size633
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815563.4069533-UTR-L-elsbetiae_contig1417:6689..70661622815563.4069533-UTR-L-elsbetiae_contig1417:6689..7066Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1417 6690..7066 +
1691682961.7245712-UTR-L-elsbetiae_contig1417:6689..70661691682961.7245712-UTR-L-elsbetiae_contig1417:6689..7066Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1417 6690..7066 +
1622815563.4974406-UTR-L-elsbetiae_contig1417:12409..130151622815563.4974406-UTR-L-elsbetiae_contig1417:12409..13015Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1417 12410..13015 +
1691682961.8173528-UTR-L-elsbetiae_contig1417:12409..130151691682961.8173528-UTR-L-elsbetiae_contig1417:12409..13015Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1417 12410..13015 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815563.4183877-CDS-L-elsbetiae_contig1417:7066..71401622815563.4183877-CDS-L-elsbetiae_contig1417:7066..7140Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1417 7067..7140 +
1691682961.735624-CDS-L-elsbetiae_contig1417:7066..71401691682961.735624-CDS-L-elsbetiae_contig1417:7066..7140Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1417 7067..7140 +
1622815563.4299796-CDS-L-elsbetiae_contig1417:9275..93391622815563.4299796-CDS-L-elsbetiae_contig1417:9275..9339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1417 9276..9339 +
1691682961.7495866-CDS-L-elsbetiae_contig1417:9275..93391691682961.7495866-CDS-L-elsbetiae_contig1417:9275..9339Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1417 9276..9339 +
1622815563.4412448-CDS-L-elsbetiae_contig1417:9933..100621622815563.4412448-CDS-L-elsbetiae_contig1417:9933..10062Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1417 9934..10062 +
1691682961.7599444-CDS-L-elsbetiae_contig1417:9933..100621691682961.7599444-CDS-L-elsbetiae_contig1417:9933..10062Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1417 9934..10062 +
1622815563.4507902-CDS-L-elsbetiae_contig1417:10542..106291622815563.4507902-CDS-L-elsbetiae_contig1417:10542..10629Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1417 10543..10629 +
1691682961.7701476-CDS-L-elsbetiae_contig1417:10542..106291691682961.7701476-CDS-L-elsbetiae_contig1417:10542..10629Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1417 10543..10629 +
1622815563.4611366-CDS-L-elsbetiae_contig1417:11072..111951622815563.4611366-CDS-L-elsbetiae_contig1417:11072..11195Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1417 11073..11195 +
1691682961.787322-CDS-L-elsbetiae_contig1417:11072..111951691682961.787322-CDS-L-elsbetiae_contig1417:11072..11195Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1417 11073..11195 +
1622815563.4709373-CDS-L-elsbetiae_contig1417:11755..118651622815563.4709373-CDS-L-elsbetiae_contig1417:11755..11865Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1417 11756..11865 +
1691682961.7983606-CDS-L-elsbetiae_contig1417:11755..118651691682961.7983606-CDS-L-elsbetiae_contig1417:11755..11865Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1417 11756..11865 +
1622815563.483265-CDS-L-elsbetiae_contig1417:12363..124091622815563.483265-CDS-L-elsbetiae_contig1417:12363..12409Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1417 12364..12409 +
1691682961.8072824-CDS-L-elsbetiae_contig1417:12363..124091691682961.8072824-CDS-L-elsbetiae_contig1417:12363..12409Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1417 12364..12409 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1417.3098.1prot_L-elsbetiae_contig1417.3098.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1417 7067..12409 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1417.3098.1

>prot_L-elsbetiae_contig1417.3098.1 ID=prot_L-elsbetiae_contig1417.3098.1|Name=mRNA_L-elsbetiae_contig1417.3098.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=211bp
MAERKANVSEESSGEHALQTGWSFWYDKKMPKKTQDQTQYQASLHKAGSF
NTVEGFWKNYVHLKRPSNISTNVNVYLFRDEQGHVPMWERYPNGGCWILR
IRKKAGQTNTSVLGKMWQDLVLAVIGEMFEEPNVVGIGMAIRSREDLLSV
WNEDNSNDKVRFNIGERLKQVLDLEPSTLIEYKHHQIAMQDMSTFRNAKA
YVFSQSQAQS*
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mRNA from alignment at L-elsbetiae_contig1417:6690..13015+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1417.3098.1 ID=mRNA_L-elsbetiae_contig1417.3098.1|Name=mRNA_L-elsbetiae_contig1417.3098.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6326bp|location=Sequence derived from alignment at L-elsbetiae_contig1417:6690..13015+ (Laminarionema elsbetiae ELsaHSoW15)
GCCATAGATAGGGGTTACGTGATGAAGCTGAAACTCGCTACTTCACAAGG
AGCGACATCCCCTCGAACTGTTCGTGCGCTTTTTATGAAGCGAAATGGAC
AGACCCCCACCTTTTCGAAAGGAACGGTTTCTAGTTTCCAGCAGGAAACA
CCAAAACAACTGATAAAACACAACCGCCGCTCAAGAAACCCATTATTCGC
ATCTGCTCCTTCTGCTCTGTGTCGGAGTGGCCTCTCCAGGACTCTACTGG
TTTCTTCATCCAGGACACTCACGCATGGAAAAATGAATACAATTCCAACC
GAGCGGCTTCCCGATCCTGCTACATATGCACCCCCCCCTACAGGCAAGCA
GCAAGCACCGACAGAGCGTGCGTCGCGATGGCGGAGCGGAAAGCAAACGT
TTCTGAGGAGTCCAGCGGGGAGCACGCGTTGCAGACGGGATGGTCTTTCT
GGTGAGGCGGCTCGTTCCTGGGTCTATGTTTCGAGTTGATCTTCGCCCCG
ACTCTTTTGGGTTTTAAAATAAAACAAAGAATCAAAGATGGAACCTAACC
CATACTAGAGCCAAGACTCGATATGGGGTTCAAATGGTATTCCATACAGA
GACGGCAAATAGGTAGGATAGATAAAACATCGTTTCTGCCCGAAGCGTCA
CATTCACACGACACGAAATAAGTGAATTTTGTATGGGTGCTTGTGCCTGC
CGTATCGTTGTTTTTTGCTGCTGTATTGTTGTATTTTGCGTTTGCAATGT
CAATCGCTTTCCCAATGGCCTTGCGCTTGGTATGACCCGCAAAAAGCAAC
ACTTCTCTGGACGTATTCGGTGTGCGCAACAGCAGTTGTAAGCGGACGTG
GTGTGCTGTCGATACGTGTCGTACGTATACCGTACACGTGGGCTGCACAG
GATACCTCCACGTTGAAGCTCACTTTACCGAAATTCGATTGATCCGCACC
AGAGAGAAACTCCCGAACGATTGGAGGGGTTTTTCGACGAAGTACTTTCG
CAACACCCGTTAATGTTGGCACAATCGAGCTAGCTTTGAAGATCGACCCA
TGGGGGTGGGAGTTCTCCACCGTAGCGCGATCGATGGCAGTCAATACGCG
CCAACATATTTTGAAGCCTGGCGTATCTAGGGGGGGAGTCGGCAGCTATG
CTCAGTATGCATGGGGGAGAGGTATGTTACATCCTAGTTGGTTGTACGTG
ATTTTTCTGTATGTTAAAGGTAGGATAAGCACCCCTGCGCGTTTAAAGTG
TTTTGATGCGCAGCATCGGCTGTGCTCTACATGTTTTACACTCCAAAATG
GCCGGGCTACATTCGCGTCGCGCTGTTTTTTAACTGGCGTAAAACTACAA
TATAAGGAGCCGAAAACAACAGCGGTTGGAAATGCCGATCATATCCGGCA
GCACACCGAGAACGTGTTGTGCTGTTTTTACTTGCGAGGGGCGAACTATC
TACTCTGCTGAACATCAACCTGCCAGTTGAATGTGTAAATATCACGCGTT
CGTAAAATACTAGATTGGGGCCGTTGCAGAGCAAAAGCTTTGCCTTCCCG
GCACCTATATACAAACAAGCTGCGGACCATCTGTGGAGAAATGCAAACTG
TTGCGTTGGAATGGGTCGAGGACATACACGGCGGGACGCTAAGGGTCAAA
CTGGAAAATTGTGATAGTCGAAGTCAGACACCAAGTCAGCTGACATGTGA
CGGTGCCCCCCCCTCTATCCGAAGGAAGCTGTGGGCCCTCCCTGGGGTCT
CCCTTGATTTTTTTATTGCGGGGTACACTAAATAGATGCGAAACTGTTTG
GGGCCGAGTCGGGTGATTGGAGTTCTTGAACAGGCACGACGTCCTGTGCC
CGAGCTCGTCAACTGTAACTGCTGTTGCTTTAAAGCGAAACGCGCGTTGG
CACGGCTGCGTAAGGCTCGAGCTATCGCGGCTTGTGTTGTTACATGAGGT
TTTTACACTGAAAGGGATGAAGCATCCTCCGCCGTACCCTAACAGCGCGT
TCCCTTCCTGTATGACTTAACCCCCTTAAGGCCAAGGTTTTTGGGGCTAC
TTTTTGGCGCCACGTGATATGCCAAACTTTTCGACCCCCTTTTATCACGC
GACCCCAATTTCTACTTTGAAATCCCTAGTGAACGGCCCCAGATCATTTC
GGGGCCATTCAATAAGGATTTTAAGAGTTGGGGTCCGTCACAGAGTACTG
TGAGTAAGATCCAATCATAGCTCTGGAAAACTTGAAAATCTGTTGGCGTC
GTGAAGGGTTAAAGTATTATTATTGTGACGTGGCGCTTTGTGGAGATTTG
GTGCTATTGTTGCTGCATTGGTACACGCGAAAGAGAGGTCGAAGTATGGA
AATACAGACCGTCGGTCATTGTGCATTGCGCTGGGAATACCCGTTGGTTT
GTTTTGTCACCGCCGCGGTGTGGTTGTCGTTGCTACTCTGCTGCTGCTAG
TTCGAGAGAAATACATGAAAACAACCACATACTCTACTACAACGAGGTAC
CCAGGGCTTACCCCGTTGCTTGCATGTTGCGGTTCTGTCGATTTGTCTGT
GGCGTTTCCCCAATGCTCCTCTCCTGTGTGCTATAGGTATGACAAGAAGA
TGCCGAAGAAGACCCAGGACCAAACACAGTACCAGGCATCCCTCCACAAG
GTGACTGACTGACTGGCTGACTCGCTAGCTCCCTCCGTGTTGACATTCAT
CCAGAATGGCTCTAGTATGTCCTGTCCTCACGCTCCGTGCTGGCGTGGCT
CCGTCAAGTGTGGCGGCAGTGGGCGATATCCTTCGTCCAGAGTTGTTTGT
TCAGTATGTAACGAGGTTTTGCACGTGTTTGTATTCTATAATAGCACACA
TCAGTCCCACGCCGTTGGGTGTAGTAAGTGCGAAGGGCCGAAGATAAATG
AAGTATAATATGTTGTCTCCAAGACGCCGCCGCCCACGACAGAAGCGAGC
GAAAACTCTTTGGGCATGATGTGTGTCTCCGCATTCTCTCTTGGCGCGGG
GGCCGGTTACGAAGAAGACCAGATGTTGTGGCTGCAATCAGTTCGCGCGG
CCTGGACGGGAAAAGTTGGAGGTATTGATCTGGTGTGAACGGGATCGGTG
TTAACTCTCGTTTGTCTTTGGGGGCTCTGTGCGGCCTGTGTGTTTGGGTA
GGGCTTAACCCGTATCCCCGACCGGTTTCATCAGGAAATCAGCACACGCT
GATAAACGCTGATTTCACATGTGCTTGGATTTGCGATCTACCAGGCGGGA
TCTTTCAACACCGTGGAAGGTTTCTGGAAAAACTACGTCCACCTCAAGCG
GCCATCCAACATCAGCACCAACGTGAACGTCTACTTGTTCAGAGACGAGC
AGGGACATGTGCCCATGTGGGAGGTACGGTGCGGAAAAATCGGACACGTT
ACGAAGCTCAGCAAACGCTAGTCTCTCGCAAAAGTTTGGGCAGAGGCAGT
TGAATGTGCGATTTACCGCAAGCAAAACCTGTGGATGGAAACGAAAGCCG
GCACCGCCAGTGGCGCAAAAAAAAGGCTGCTCTTTGAAGTTGTGCGATAG
ACTTCCGGCGTATTGGATTGGCACGCATTTGCCAAACACATGCAGCAAAC
CTCCTCAAGAGGGACGCTTTTCGGCAGTAAGGGAAGACTCACACTCACAC
ACACACACTCACACACGCACTTAAAGAGATGCGAAGCGAGTGGTGCGCGC
TGTTGCTGTTCCTGGCCATGTGTCAGCCCTCGGTCGCCATCCTGCAGTCA
GTGTGCGTACCGCCGCTCAGCGTTAGGGATGATCAGGTACGGGTTGTTTT
ATGTTTTGCCGGATGCCTGCGTGCGTCGTATCGTGTCGTTTCATGATGAA
AAGCGCTACCCGAATGGAGGGTGCTGGATCTTGAGGATCCGGAAGAAGGC
CGGGCAGACCAACACCAGCGTGCTAGGGAAGATGTGGCAGGTGAGTAGTG
GACGAGTCACTCGCTGGCTGCTGTGGCACACCAGTATGAAAGCAAGAACG
TTTATTTGATGAGAATTTCCAAAGCAGGTGTGTACGGTGCTGGGTAGCTA
GCTCTTGATACCAGGATAGAATGGCTCACGGCAAATACACGTACCCTATT
TACCTTGGTATATTATATCGTTGTGAATGATGGTGTTGATCGTGGTGGTT
TCTCACCCATCGTGAGAGCCTTCGAGCACTGAGCTTTAAAACGTGCCGTG
CATTGAAATATGTTCTTGGTGTACTGCGGCCACATGATGTTAATTGTGGC
ACGGAACAAGTACAACGCTGTCGACCTGTTTGCACAGAATAAAAATCGTG
AACGAACGCCATCTTATTTGGTATTGTACTATTGTCCTCGTGCTTGCTTT
CGCTCGGTCGTTCGTTCGCGGTTTGACTCACAGGACCTGGTGCTCGCGGT
TATCGGGGAGATGTTCGAGGAGCCCAACGTGGTGGGCATCGGTATGGCAA
TCCGCTCTAGGGAAGATCTTCTTTCCGTCTGGAACGAGGACAACAGCAAC
GACAAGGTAATACCCGATATATGTATATGCGAAGTAGACTAGACGGTCGG
TAGGTGGGTGCAGCAGCAGCGCATAGGCTGGACAGCATTTCGTTTCGTCC
GTGCCCGTGTGATGACCTGTCACGCTGCCCTCGTGTGGTTTTTTGGTTCT
GTGCTGACGCCACGCGCGGTTTCCCCATGGCGCGCCGTAACAGTATGCCA
TGATGTTGTATGCTATGATGTGTTGTGGTCCACAGGAAACGAAGCCATGA
GCTTTTGCTGTTGCGCAAGCCGCACAATGAGACGCCATACGCCGTGCCAC
AAATACCGCCGTTGTGTTTGTGCGACGTGTATGGTGTCATTTTCTTTTTC
TGGCGCCATGGGATGCGGTGCATTTTTTGCGCGCTCAGCATTGGTTTTCG
TCCAGAGCATCGCGTCTTATATCACTCGGTTCATGTACGCAACAAGCCCG
TTTTTCTCTTCCGCCGCTACATGTTTTGTCATACTCCGACCCGCTGCTGA
TGTTTTGTGCTGTTGCTGCTCTGCTGCTGCTGCTGCTATCTTCGTTGGCT
GCTCTGATGGTTCAAGGTGAGGTTCAACATCGGCGAGCGCCTGAAGCAGG
TTCTTGACCTCGAACCATCGACGCTGATCGAGTACAAGCACCACCAGATC
GCGATGCAGGACATGTCCACTTTCAGGTACTGAGCAGATAGCGGTGCTGG
CAGTACGCCGCAACTTAGCTGGCAGACTTTGGTACTGCTTTGATGCTGAT
GTCAGCACCAATTCAGACAACTCTGTTATTTTGCTCTCATTTACTATCGG
CACAATCAAGAAAACCTGTTCGAAATCTATGTGCACGTCTCTGTCACCGT
ATCCCTTCGGCTGCTTCCAAGATCTGTAGGCCTGCTGTAAACGTGGTCCG
CAACCTCAAAACACTTCACCTACGCGTTGCAGTGTCACTAAGTTAACCGG
CTGACAGCTGCATTTTCTCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCG
GGGTTTTTTTTTGGCGGCGCCCGCACCCACACGCCGTCCGCCTCCGCCNN
NNNNNNNNCCTCGTCCCCAAACCACCCCCCCCCCCCCGGTCATTGGGCGC
CATGGAAGCCCCGGAAAGGGTGCCTCTTTCTCCCCCCCCCCCCCCCCCCC
CACCATGTGTTTTGTTTTGCGCAGGAACGCCAAAGCGTACGTGTTCAGCC
AATCACAGGCCCAAAGTTGAAACCATCAACGTTGAGGGCGTAAGTGTTTT
TTGAGCCATGTTTTACACAATGTTTGGTTCTTCCTCGCGTTGTGCGTGAA
TGTTCCTCGTGTCTATGGGCGAGAGAGGTTGTTGAGGGGCTCGGTCAACA
CATAAACGGCACATTGTTTTGTGAGAAAATAGGGGGTGAAGAACGAGCTG
CGAGTCAATAAATATTCGGGAGGTTTGTCAGGTTTTGTGGAATGTCGACG
CAGCAACCTGTCTTCGATTGTTGTTTTTGATACAAAGCTTACCTACCGGG
TGTCGGCGTACGGCCAACATACTCCCGATTTTGTTTGTGGCGGCCTTGGA
TACGAAGGTGCTGCATCCTGAACTACGTATAGGTACCTGGCCATTTTCCG
TCGGAAGTACGGATGTACGGCAAACAGCTTTGATGGATACATTTCGTGTG
GTTTGGAACCTGGAAAAGTGAGGTCGGTTTCGGTGTTAGGTTTGTGCAAG
CAAGCAGGTACATTTTATAGTGATATTTTTGCGCCCTCGTTTTCTTTTGT
TTTTGCGAGTCCTCGCCTTCTTTGTTGCGCGTGAAAAAGCCCAGACCACG
TTTGTTTCTGGGCCCGAGCACAAGTT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1417:6690..13015+

>mRNA_L-elsbetiae_contig1417.3098.1 ID=mRNA_L-elsbetiae_contig1417.3098.1|Name=mRNA_L-elsbetiae_contig1417.3098.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1266bp|location=Sequence derived from alignment at L-elsbetiae_contig1417:6690..13015+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGGAGCGGAAAGCAAACGTTTCTGAGGAGTCCAGCGGGGAGCACGC
GTTGCAGACGGGATGGTCTTTCTGATGGCGGAGCGGAAAGCAAACGTTTC
TGAGGAGTCCAGCGGGGAGCACGCGTTGCAGACGGGATGGTCTTTCTGGT
ATGACAAGAAGATGCCGAAGAAGACCCAGGACCAAACACAGTACCAGGCA
TCCCTCCACAAGGTATGACAAGAAGATGCCGAAGAAGACCCAGGACCAAA
CACAGTACCAGGCATCCCTCCACAAGGCGGGATCTTTCAACACCGTGGAA
GGTTTCTGGAAAAACTACGTCCACCTCAAGCGGCCATCCAACATCAGCAC
CAACGTGAACGTCTACTTGTTCAGAGACGAGCAGGGACATGTGCCCATGT
GGGAGGCGGGATCTTTCAACACCGTGGAAGGTTTCTGGAAAAACTACGTC
CACCTCAAGCGGCCATCCAACATCAGCACCAACGTGAACGTCTACTTGTT
CAGAGACGAGCAGGGACATGTGCCCATGTGGGAGCGCTACCCGAATGGAG
GGTGCTGGATCTTGAGGATCCGGAAGAAGGCCGGGCAGACCAACACCAGC
GTGCTAGGGAAGATGTGGCAGCGCTACCCGAATGGAGGGTGCTGGATCTT
GAGGATCCGGAAGAAGGCCGGGCAGACCAACACCAGCGTGCTAGGGAAGA
TGTGGCAGGACCTGGTGCTCGCGGTTATCGGGGAGATGTTCGAGGAGCCC
AACGTGGTGGGCATCGGTATGGCAATCCGCTCTAGGGAAGATCTTCTTTC
CGTCTGGAACGAGGACAACAGCAACGACAAGGACCTGGTGCTCGCGGTTA
TCGGGGAGATGTTCGAGGAGCCCAACGTGGTGGGCATCGGTATGGCAATC
CGCTCTAGGGAAGATCTTCTTTCCGTCTGGAACGAGGACAACAGCAACGA
CAAGGTGAGGTTCAACATCGGCGAGCGCCTGAAGCAGGTTCTTGACCTCG
AACCATCGACGCTGATCGAGTACAAGCACCACCAGATCGCGATGCAGGAC
ATGTCCACTTTCAGGTGAGGTTCAACATCGGCGAGCGCCTGAAGCAGGTT
CTTGACCTCGAACCATCGACGCTGATCGAGTACAAGCACCACCAGATCGC
GATGCAGGACATGTCCACTTTCAGGAACGCCAAAGCGTACGTGTTCAGCC
AATCACAGGCCCAAAGTTGAGAACGCCAAAGCGTACGTGTTCAGCCAATC
ACAGGCCCAAAGTTGA
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