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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Ec32 ortholog description | Ankyrin repeat-containing domain |
| Ec32 ortholog | Ec-28_000210.1 |
| Exons | 3 |
| Model size | 2159 |
| Cds size | 852 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815563.3184814-UTR-L-elsbetiae_contig1417:232..523 | 1622815563.3184814-UTR-L-elsbetiae_contig1417:232..523 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1417 233..523 + |
| 1691682961.670569-UTR-L-elsbetiae_contig1417:232..523 | 1691682961.670569-UTR-L-elsbetiae_contig1417:232..523 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1417 233..523 + |
| 1622815563.3714292-UTR-L-elsbetiae_contig1417:1785..2801 | 1622815563.3714292-UTR-L-elsbetiae_contig1417:1785..2801 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1417 1786..2801 + |
| 1691682961.7139983-UTR-L-elsbetiae_contig1417:1785..2801 | 1691682961.7139983-UTR-L-elsbetiae_contig1417:1785..2801 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1417 1786..2801 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815563.335274-CDS-L-elsbetiae_contig1417:523..526 | 1622815563.335274-CDS-L-elsbetiae_contig1417:523..526 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1417 524..526 + |
| 1691682961.6806147-CDS-L-elsbetiae_contig1417:523..526 | 1691682961.6806147-CDS-L-elsbetiae_contig1417:523..526 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1417 524..526 + |
| 1622815563.3491633-CDS-L-elsbetiae_contig1417:683..1064 | 1622815563.3491633-CDS-L-elsbetiae_contig1417:683..1064 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1417 684..1064 + |
| 1691682961.6892805-CDS-L-elsbetiae_contig1417:683..1064 | 1691682961.6892805-CDS-L-elsbetiae_contig1417:683..1064 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1417 684..1064 + |
| 1622815563.3607326-CDS-L-elsbetiae_contig1417:1317..1785 | 1622815563.3607326-CDS-L-elsbetiae_contig1417:1317..1785 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1417 1318..1785 + |
| 1691682961.6989658-CDS-L-elsbetiae_contig1417:1317..1785 | 1691682961.6989658-CDS-L-elsbetiae_contig1417:1317..1785 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1417 1318..1785 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1417.3097.1 >prot_L-elsbetiae_contig1417.3097.1 ID=prot_L-elsbetiae_contig1417.3097.1|Name=mRNA_L-elsbetiae_contig1417.3097.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=284bp
MLPQSATTRLSRARRRRLLAQWNSLVPPSPRASCQAHQQQTAKPQRSPSS
TMLDVDDFDQEVLLSSTRVKIGGVRNDALVDIVGLEEQIEREERSGEAMA
KKRTNMEATRSAVSEALVLWSSKADILQARLAVVRNLTATALTASRPTTS
ITSKHAVSLEEYLASPSPRCCACDKRGGYHQASMASVPTSEARPCVAAPA
SPKIVDDDARRSNNDAGQSTTNDRGSSACARINHFHEDSLSATDSRGGPI
GAREKQLVVHLQDCLKHMMHLRGWLRLLDQELG* back to topmRNA from alignment at L-elsbetiae_contig1417:233..2801+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1417.3097.1 ID=mRNA_L-elsbetiae_contig1417.3097.1|Name=mRNA_L-elsbetiae_contig1417.3097.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2569bp|location=Sequence derived from alignment at L-elsbetiae_contig1417:233..2801+ (Laminarionema elsbetiae ELsaHSoW15)
TCTATGTACATACACACATAGACTTCAAGGGGCCCACAGCAGTCTCGCAC
ACACACTCGCACACCAGCTGTCGCACATACATCTCCTGACAACCAACGCG
CCCGCTTCGCCGTAGTTTAACGTTTTTGTCTTGGCCGGCAGCGTTCATAC
CATTCCTCGCTCTTAACGTGATCAGGACCCTGACACTTTCCACCTTTCGA
CTTGGCAGGTACCGTTTCCCACACCCGCCGGCACACTTTCCTTGACAACC
TCGTGCCCCTGGCTGCCTTAGAAGGCGTCGTTGACTGCCAAATGGTGAGA
GGGGTTAGTTACGTACGATCAGCAACGACAAAACATAGATCAAGCCGTTG
CACATGTATACTCGCTCATCCTTGCGCCCTGCAATCTTTGAGCCAATTTT
ACTACCGTATGTCTTCCTCATTCTCGCTCCTTCGTTCCATCGCATGAGCA
GCTACCTCAGTCCGCCACGACACGTCTGTCCCGTGCGCGGAGACGCCGGC
TGCTAGCTCAATGGAACAGTCTGGTGCCCCCATCACCGCGTGCATCATGC
CAAGCCCACCAACAACAAACGGCTAAACCTCAGCGTTCGCCATCATCGAC
GATGCTCGATGTGGATGACTTTGACCAGGAAGTATTGCTTAGCAGCACGA
GGGTGAAAATAGGCGGCGTTAGGAACGACGCGCTGGTAGATATAGTAGGG
TTGGAGGAACAGATCGAACGGGAGGAACGCAGCGGAGAGGCGATGGCCAA
GAAGAGGACCAACATGGAGGCCACAAGGTCCGCGGTATCCGAGGCCCTCG
TGCTTTGGAGCAGCAAAGCCGACATTCTACAGGTATGTGATCGGGGGTAC
AAATTGTCCTACTGCGGCGCGAGCAAAGAGGCATGGTGCTGGGTTTTAGG
GACTCAAACCTTACGGTTTGCAATATATTATCATCGTACAGTGCACTCTT
GCTGCCGCAACCATCACGGTAACGATCATTTGTTTTGGCTGCCGAGTTCT
ATGTTGAAATATCTATTGTACCGCCCTGTTTTGGCGTGGGTCTCGCCCGC
CGCCGCCGCGTTCACTAACCCAAATAACGTGGCAGGCAAGACTCGCGGTC
GTGAGAAACTTGACGGCCACAGCATTGACGGCATCGAGACCAACCACCTC
TATCACAAGCAAGCACGCCGTGTCCTTGGAGGAGTACTTGGCCAGCCCAT
CACCACGGTGCTGCGCATGTGACAAGCGAGGGGGCTACCATCAGGCGAGC
ATGGCTTCGGTACCTACCTCCGAGGCGCGTCCATGCGTCGCCGCCCCTGC
ATCCCCAAAGATCGTTGATGATGATGCACGTAGAAGCAACAACGACGCCG
GCCAGAGCACCACAAATGATCGGGGTTCGAGTGCGTGCGCGAGAATAAAC
CATTTTCACGAGGATAGTCTGTCTGCCACTGATTCTCGTGGTGGCCCGAT
TGGCGCTAGGGAAAAGCAGCTGGTTGTCCACCTCCAAGATTGCCTCAAGC
ACATGATGCATCTCCGAGGTTGGCTCCGACTTCTCGACCAAGAGCTTGGC
TAGTTGTGTTATTCTCCTTTTCAAACCGACTGCAAATAGTGCATAGTCTA
GTCTTGCTGTTGAAGTTCACCCAGTACTGCGAGATTGCTTGTTTTATAGA
AGTAAACGATACATTATTGGCTGCTAGAGGGGTTCACTTGACTGAGATTT
TCCGTCGAAATCACTGTGAAAGGTTGGGGGGCTAGAAGTGGTTTTGGATT
TGATTAACAAGGAGGGCGAAAGGGTTGGACCCTTTGGACCCTTCTGCTTT
TCGCAATGGTTGGCGCAGGTATTGACTAAGGTTTTGATTTCGTCGCCGTA
CTTTCCTCCAGCAATAGATAGTTGTTCGCTTATGTAGGGTCTGGTGAACT
CTGACCATGCTGCTCGTGTGTGAGGTTGTACCGCCATGTATCTACAACTT
CATATGCCCCGAACGTATGTAATTACGGTGCAAAAAGAAGAAACAAAATA
TCTGTGGCTTGGTAGTTGCCCCAACACACGGCGCGCTAGCCCCCCTGTGT
AAGTGTTGGTTTTCAGTTTTCAGCAGCTCCCCCTTCATTGACATCTATCT
ACCCACCCTTGCGGTATGACTTCCTTCGCCAACCACCGATACACCGGTTG
TACAGTTGGCGCCCGAAAGTAAGAAACGTAAAATATGGGTCGAGCCTCAA
TTTCCTATTTTCGGCCGAAACACCAGCCTACGTTGTCATTTTCTTATAAG
CAGTTTCTTATTTTTTGGACCTTGCAGGATATTGCTTGTTTTCTTGTAAT
GCCACCTTTCTAGCGCCTACGCTGCTTCTGTTGCATGTCCTCATGTCTAA
TGAGGTTCGTAACCTGCCCATGGGGTTGCGTATTGTTGCATGTGGCATCA
ATATTATCATTCCCTCACAACATTCTCGCCACGGCCCGGAGAACACATCC
GCACATGGAAACGAAGCGCAAAAAACCCCGAACAGAGTGGTGCAAGGCGC
GTTTCGGGCGAAGGTGCCGTACAGTATCCCCAAAAGATCCGCACCGCGCC
AATTGCCTCAAAGAAACAA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1417:233..2801+ >mRNA_L-elsbetiae_contig1417.3097.1 ID=mRNA_L-elsbetiae_contig1417.3097.1|Name=mRNA_L-elsbetiae_contig1417.3097.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1704bp|location=Sequence derived from alignment at L-elsbetiae_contig1417:233..2801+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATGCTACCTCAGTCCGCCACGACACGTCTGTCCCGTGCGCGGAGACG
CCGGCTGCTAGCTCAATGGAACAGTCTGGTGCCCCCATCACCGCGTGCAT
CATGCCAAGCCCACCAACAACAAACGGCTAAACCTCAGCGTTCGCCATCA
TCGACGATGCTCGATGTGGATGACTTTGACCAGGAAGTATTGCTTAGCAG
CACGAGGGTGAAAATAGGCGGCGTTAGGAACGACGCGCTGGTAGATATAG
TAGGGTTGGAGGAACAGATCGAACGGGAGGAACGCAGCGGAGAGGCGATG
GCCAAGAAGAGGACCAACATGGAGGCCACAAGGTCCGCGGTATCCGAGGC
CCTCGTGCTTTGGAGCAGCAAAGCCGACATTCTACAGCTACCTCAGTCCG
CCACGACACGTCTGTCCCGTGCGCGGAGACGCCGGCTGCTAGCTCAATGG
AACAGTCTGGTGCCCCCATCACCGCGTGCATCATGCCAAGCCCACCAACA
ACAAACGGCTAAACCTCAGCGTTCGCCATCATCGACGATGCTCGATGTGG
ATGACTTTGACCAGGAAGTATTGCTTAGCAGCACGAGGGTGAAAATAGGC
GGCGTTAGGAACGACGCGCTGGTAGATATAGTAGGGTTGGAGGAACAGAT
CGAACGGGAGGAACGCAGCGGAGAGGCGATGGCCAAGAAGAGGACCAACA
TGGAGGCCACAAGGTCCGCGGTATCCGAGGCCCTCGTGCTTTGGAGCAGC
AAAGCCGACATTCTACAGGCAAGACTCGCGGTCGTGAGAAACTTGACGGC
CACAGCATTGACGGCATCGAGACCAACCACCTCTATCACAAGCAAGCACG
CCGTGTCCTTGGAGGAGTACTTGGCCAGCCCATCACCACGGTGCTGCGCA
TGTGACAAGCGAGGGGGCTACCATCAGGCGAGCATGGCTTCGGTACCTAC
CTCCGAGGCGCGTCCATGCGTCGCCGCCCCTGCATCCCCAAAGATCGTTG
ATGATGATGCACGTAGAAGCAACAACGACGCCGGCCAGAGCACCACAAAT
GATCGGGGTTCGAGTGCGTGCGCGAGAATAAACCATTTTCACGAGGATAG
TCTGTCTGCCACTGATTCTCGTGGTGGCCCGATTGGCGCTAGGGAAAAGC
AGCTGGTTGTCCACCTCCAAGATTGCCTCAAGCACATGATGCATCTCCGA
GGTTGGCTCCGACTTCTCGACCAAGAGCTTGGCTAGGCAAGACTCGCGGT
CGTGAGAAACTTGACGGCCACAGCATTGACGGCATCGAGACCAACCACCT
CTATCACAAGCAAGCACGCCGTGTCCTTGGAGGAGTACTTGGCCAGCCCA
TCACCACGGTGCTGCGCATGTGACAAGCGAGGGGGCTACCATCAGGCGAG
CATGGCTTCGGTACCTACCTCCGAGGCGCGTCCATGCGTCGCCGCCCCTG
CATCCCCAAAGATCGTTGATGATGATGCACGTAGAAGCAACAACGACGCC
GGCCAGAGCACCACAAATGATCGGGGTTCGAGTGCGTGCGCGAGAATAAA
CCATTTTCACGAGGATAGTCTGTCTGCCACTGATTCTCGTGGTGGCCCGA
TTGGCGCTAGGGAAAAGCAGCTGGTTGTCCACCTCCAAGATTGCCTCAAG
CACATGATGCATCTCCGAGGTTGGCTCCGACTTCTCGACCAAGAGCTTGG
CTAG back to top
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