mRNA_L-elsbetiae_contig14159.3091.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14159.3091.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE) HSP 1 Score: 89.4 bits (220), Expect = 4.450e-18 Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = -1 Query: 13 VGEVVQEIDADQQYPFRLFEKTGTRMTVDGSGDERINIEGMSGPYNFMDVEDGGSSEE 186 V EV+++I+ADQQY RLFEKTGT MT DGSGDERIN+EG+SGP NFMD + GGSS E Sbjct: 1751 VAEVIEKINADQQYRSRLFEKTGTGMTADGSGDERINLEGVSGPLNFMDADVGGSSGE 1808
BLAST of mRNA_L-elsbetiae_contig14159.3091.1 vs. uniprot
Match: A0A6H5K5A6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A6_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 1.150e-13 Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = -1 Query: 13 VGEVVQEIDADQQYPFRLFEKTGTRMTVDGSGDERINIEGMSGPYNFMDVEDGGSSEE 186 V + +EID D+QY FRLFEKTG MT DGSGD++IN+EG+S Y+FMD+E G S++E Sbjct: 233 VAQATEEIDKDEQYRFRLFEKTGCGMTADGSGDDKINLEGLS-TYSFMDMEGGASADE 289
BLAST of mRNA_L-elsbetiae_contig14159.3091.1 vs. uniprot
Match: A0A6H5K1I2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1I2_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 1.320e-13 Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = -1 Query: 13 RHQTAPFEAEASASDTL*RHRRSAGAEVGEVVQEIDADQQYPFRLFEKTGTRMTVDGSGDERINIEGMSGPYNFMDVEDGGSSEE 267 R+ +P EA+A T R + V + +E+D D+QY FRLFEKT MT DGSGD++IN+EG+S Y+FMDVE G S++E Sbjct: 28 RNSISPQEAKAL---TCSERRVFLTSWVAQATEEMDKDEQYRFRLFEKTECGMTADGSGDDKINLEGLS-TYSFMDVEGGASADE 108
BLAST of mRNA_L-elsbetiae_contig14159.3091.1 vs. uniprot
Match: D8LRF1_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF1_ECTSI) HSP 1 Score: 68.2 bits (165), Expect = 1.040e-10 Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = -1 Query: 10 VGEVVQEIDADQQYPFRLFEKTGTRMTVDGSGDERINIEGMSGPYNFM----DVEDGGSSEEG 186 VG ++E+D+ ++Y FRLFEK G MTVDGSGD+RI +EG+ PY F +D GSSE G Sbjct: 534 VGAAMEELDSREEYRFRLFEKCGMAMTVDGSGDDRITLEGLDKPYTFAGDGDSSDDEGSSETG 596
BLAST of mRNA_L-elsbetiae_contig14159.3091.1 vs. uniprot
Match: A0A6H5JXP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP4_9PHAE) HSP 1 Score: 66.2 bits (160), Expect = 1.480e-10 Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = -1 Query: 10 VGEVVQEIDADQQYPFRLFEKTGTRMTVDGSGDERINIEGMSGPYNFMDVEDGGSSEEG 186 +G + ++ Q Y +RLFEK G MTVDGSGD+RI +EG+ PY F D ED E+G Sbjct: 84 MGAAMARLNIQQAYRYRLFEKCGMAMTVDGSGDDRITLEGLDKPYTFADGEDSSDDEQG 142
BLAST of mRNA_L-elsbetiae_contig14159.3091.1 vs. uniprot
Match: A0A6H5KLU8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU8_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 2.540e-10 Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = -1 Query: 10 VGEVVQEIDADQQYPFRLFEKTGTRMTVDGSGDERINIEGMSGPYNFMDVEDGGSSEEG 186 +G + +D+ Q Y +RLFEK G MTVDGSGD+RI +EG+ PY F + ED E+G Sbjct: 89 MGAAMARLDSQQAYRYRLFEKCGMAMTVDGSGDDRITLEGLDKPYTFANDEDSSDDEQG 147
BLAST of mRNA_L-elsbetiae_contig14159.3091.1 vs. uniprot
Match: A0A6H5JEE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEE5_9PHAE) HSP 1 Score: 63.9 bits (154), Expect = 4.390e-10 Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = -1 Query: 13 IDADQQYPFRLFEKTGTRMTVDGSGDERINIEGMSGPYNFMDVEDGGSSEE 165 ++ D+QY FRLFEK MT DGSGD++IN+EG+S Y+FMDVE G S++E Sbjct: 1 MEKDEQYRFRLFEKIECGMTADGSGDDKINLEGLS-TYSFMDVEGGASADE 50
BLAST of mRNA_L-elsbetiae_contig14159.3091.1 vs. uniprot
Match: A0A6H5JBK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBK8_9PHAE) HSP 1 Score: 65.5 bits (158), Expect = 4.760e-10 Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = -1 Query: 13 VGEVVQEIDADQQYPFRLFEKTGTRMTVDGSGDERINIEGMSGPYNFMDVEDGGSSEE 186 +G + +++ Q Y +RLFEK G MTVDGSGD+RI +EG+ PY F + EDG E+ Sbjct: 62 MGAAMARLNSQQAYRYRLFEKCGMAMTVDGSGDDRITLEGLDKPYTFANDEDGSDDEQ 119
BLAST of mRNA_L-elsbetiae_contig14159.3091.1 vs. uniprot
Match: A0A6H5KL79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL79_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 5.620e-10 Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = -1 Query: 13 VGEVVQEIDADQQYPFRLFEKTGTRMTVDGSGDERINIEGMSGPYNFMDVEDGGSSEE 186 +G + ++ Q Y +R+FEK G MTVDGSGD+RI +EG+ PY F + ED S +E Sbjct: 81 MGAAMARLNRQQTYRYRIFEKCGMAMTVDGSGDDRITLEGLDKPYTFANDEDSSSDDE 138
BLAST of mRNA_L-elsbetiae_contig14159.3091.1 vs. uniprot
Match: A0A6H5KZ23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ23_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 8.260e-10 Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = -1 Query: 10 VGEVVQEIDADQQYPFRLFEKTGTRMTVDGSGDERINIEGMSGPYNFMDVEDGGSSEEG 186 +G + +++ Q Y +RLFEK G MTVDGSGD+RI +EG+ PY F + ED E+G Sbjct: 100 MGAAMARLNSQQAYRYRLFEKCGMAMTVDGSGDDRITLEGLDKPYTFANDEDSSDDEQG 158 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14159.3091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14159.3091.1 >prot_L-elsbetiae_contig14159.3091.1 ID=prot_L-elsbetiae_contig14159.3091.1|Name=mRNA_L-elsbetiae_contig14159.3091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=134bp LPLPLLRAAAVFHVHEVVRPGHAFDVDALVSRAVHCHSRPCLLEQTERILback to top mRNA from alignment at L-elsbetiae_contig14159:3693..4094+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14159.3091.1 ID=mRNA_L-elsbetiae_contig14159.3091.1|Name=mRNA_L-elsbetiae_contig14159.3091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=402bp|location=Sequence derived from alignment at L-elsbetiae_contig14159:3693..4094+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14159:3693..4094+ >mRNA_L-elsbetiae_contig14159.3091.1 ID=mRNA_L-elsbetiae_contig14159.3091.1|Name=mRNA_L-elsbetiae_contig14159.3091.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=804bp|location=Sequence derived from alignment at L-elsbetiae_contig14159:3693..4094+ (Laminarionema elsbetiae ELsaHSoW15)back to top |