prot_L-elsbetiae_contig1413.3080.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1413.3080.1
Unique Nameprot_L-elsbetiae_contig1413.3080.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length368
Homology
BLAST of mRNA_L-elsbetiae_contig1413.3080.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 432 bits (1112), Expect = 7.790e-139
Identity = 231/387 (59.69%), Postives = 275/387 (71.06%), Query Frame = 0
Query:    1 MRVPGAAIALVGSHVDNMKKEGLDADLAKKRLHE---------------VVRKFIVDKAANTLKGKNSRCIDTESPTTMDADHLRDGAQAVPLDDRLAQRSSSSKLSTEPLVLHDHVFEVSLNPASVRVLREWVVKAASGRDCPRGFSFPAVDQVVPNAWIKAFYVMDVVERTTPCVMWSEAVAKFSDAMSG----TDDPSKVLLRAMQHREAEGSALLLLADASAPGDTDMLHLDPSWLVELVRRLADHNLVDEDEKKQGIIKQQLHRYAKEQQTDFEPLWDMHGVYCKSGHLSQDYLRFLWTYRKIDPPGPAVDLTDIKFESIISTMVRLLVMYKARGEGDFVVPARLPEYGDQRVLPPDNIAEVVVMVECSFGQAYPPLGIVGR 368
            MRVPGAA+ALVGSHVD M+ E  DA  A+  LH                VV KFI DKA N  + ++ RCID ES   M+ DHLRD       D R+A RS SS+ + EPLVLH +VF+VSL P SV  LR+W+VKAASGR+CP GF+FPAVDQ V  AWI+A+  MDV++ T PCV+WS AV +F   MSG      D  KVLLRAMQHREAEG  LL LAD SAP  +DMLHLDPSWL+ELVRRLADHNLVD+D+KK+G ++Q L  YAK Q     PL+D+H VYC+SG L++ YLRFLW +RKI+ PGP VDLTD +FESI+STM RLLVMY AR   + VVPARL EYGDQR+  PD +  +V+ +ECSFGQ YPP GIVGR
Sbjct:  394 MRVPGAAVALVGSHVDQMESE--DARQAETHLHTGEASWFFRGRVPCSLVVSKFIKDKAGNASRRQSIRCIDAESTKPMEVDHLRD-------DGRMAPRSGSSRFTAEPLVLHGNVFKVSLAPTSVVELRQWIVKAASGRECPTGFNFPAVDQTVSKAWIEAYDAMDVLKGTAPCVLWSRAVEEFRRKMSGIPPVAGDAGKVLLRAMQHREAEGGVLLSLADDSAPVASDMLHLDPSWLIELVRRLADHNLVDKDKKKRGSLEQGLRVYAKRQGLAAAPLFDIHNVYCRSGRLNRAYLRFLWMHRKIEGPGPTVDLTDPEFESIVSTMERLLVMYTARDADNLVVPARLQEYGDQRI--PDRLTNMVLKIECSFGQVYPPPGIVGR 769          
BLAST of mRNA_L-elsbetiae_contig1413.3080.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 3.600e-49
Identity = 113/306 (36.93%), Postives = 170/306 (55.56%), Query Frame = 0
Query:   92 STEPLVLHDHVFEVSLNPAS-VRVLREWVVKAASGRDCPRGFSFPAVDQVVPNAWIKAFYVMDVV--ERTTPCVMWSEAVAKFSDAMS---------------GTDDPSKVLLRAMQHREAEGSALLLLADASAPGDTDMLHLDPSWLVELVRRLADHNLVDEDEKKQGIIKQQLHRYAKEQQ---TDFEPLWDMHGVYCKSGHLSQDYLRFLWTYRKIDPPGP--AVDLTDIKFESIISTMVRLLVMYKARGEGD-----FVVPARLPEYGDQRVLPPD-NIAEVVVMVECSFGQAYPPLGIVGR 368
            ST PL+LH  VF  SL   + +  L +W++  A  +     FSFPAV  ++P AW+ A   ++ +  E+ TP V+W +AV  F                      +D +  L  AM+HREAEG  +L L D S+P  +DM+H+DP WL+ELVRR+ DHNLVD+  KKQ  I Q+L  Y + +    + ++ L + H  + + G L++DYLRFLW +RK++  G      L    F+S++ TM++ L +Y + GE        +VPARLPE+G+  +L     + EVVV     F +++ P GI+GR
Sbjct: 1467 STHPLILHPRVFCASLGLDNRIGRLSDWIIGVAPEKI---SFSFPAVATILPAAWVDAIAAVEALHKEKGTPYVLWGDAVRAFQRYFQEKHKEEGKEERNKPLSDEDAATNLKEAMKHREAEGGVILSLRDESSPAQSDMIHVDPRWLIELVRRVTDHNLVDK--KKQNKILQELLEYDRTRPDTLSGYKNLCETHACFIRQGRLNRDYLRFLWVHRKLEVEGDYAGAQLDKDAFDSMVDTMIKYLFIYPSHGECSNAEDCHIVPARLPEHGNDNILEESIGLGEVVVGKTAWFLRSHAPTGIIGR 1767          
BLAST of mRNA_L-elsbetiae_contig1413.3080.1 vs. uniprot
Match: A0A6H5JR01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR01_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 4.650e-42
Identity = 102/287 (35.54%), Postives = 163/287 (56.79%), Query Frame = 0
Query:   93 TEPLVLHDHVFEVSLNPAS-VRVLREWVVKAASGRDCPRGFSFPAVDQVVPNAWIKAFYVMDVVERTTPCVMWSEAVAKFSDAMSGTDDPSKVLLRAMQHREAEGSALLLLADASAPGDTDMLHLDPSWLVELVRRLADHNLVDEDEKKQGIIKQQLHRYAKEQQ---TDFEPLWDMHGVYCKSGHLSQDYLRFLWTYRKIDPPG--PAVDLTDIKFESIISTMVRLLVMYKARGE-----GDFVVPARLPEYGDQRVLPPD-NIAEVVVMVECSFGQAYPPLGIVG 367
            T PL+LH  VF  SL   + V  L +W++  ++ +     FSFPAV  ++P+AW+     +   +R        E   + +  +S  ++ S  L  AM+HREAEG  +L L + S+P  +DM+H+DP WL++LVRR+ DHNLVD+  K +  I ++L  Y + +    + ++ L + H  + + G L++ YLRFLW +RK++  G    V L +  F+S++ TM++ L +Y + GE     G ++VPARLPE G   VL     + EVVV     F +++ P GI+G
Sbjct:   40 TLPLILHPRVFRASLGLDNRVNRLSDWIIDVSTEKI---SFSFPAVATILPSAWVLWGDAVKAFQRYFQEKHKEEREDERNKPLSD-EEASSNLKEAMKHREAEGGVILSLREESSPAQSDMIHVDPRWLIDLVRRVTDHNLVDK--KNEHEILKELLEYGRTRPDTLSGYKNLCETHTCFIRQGRLNRKYLRFLWVHRKLEVEGGYAGVQLENDTFDSMVDTMIKYLFIYPSHGECSKAEGFYIVPARLPEIGKDNVLEESIGLDEVVVGKTAWFLRSHAPTGIIG 320          
BLAST of mRNA_L-elsbetiae_contig1413.3080.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.020e-12
Identity = 86/384 (22.40%), Postives = 167/384 (43.49%), Query Frame = 0
Query:    2 RVPGAAIALVGSHVDNMKKEGLDADLAKKRLHEVVRKFIVDKAANTLKGKNSRCIDTESPTTMDADH--LRDGAQAVPLDDRLAQRSSSSKLSTEPLVLHDHVFEVSLNPA---SVRVLREWVVKAASGRDCPRGFSFPAVDQVVPNAWIKAFYVMDVVERTT--------------------------PCVMWSEAVAKFSDA-----MSG--TDDPSKVLLRAMQHREAEGSALLLLADAS------APGDTDMLHLDPSWLVELVRRLADHNLVDEDEKKQGIIKQQLHRYAKEQQTDFEPLWDMHGVYCKSGHLSQDYLRFLWTYRKID------PPGPAVDLTDIKFESIISTMVRLLVMYKAR-GEGDFVVPARLPEY 334
            RVPG+ + L+G+H D+       A+ +K+     V  F+  +     K    + I  E     D  H  ++D  +  PL                 +V+   +  ++L+P+   +   LRE +   A G     G+SFP+V+  VP   + A   ++ V R                            P V++ EA+++F +      M G    + ++V L A++  E +G+ LL  AD        A  +  ++H++P+W  +L+RR+ D  L+D  + +Q  +   + R       D   L   H  +  +G L++ Y+RFLW  R ++         P +++++    +I+ +++ +  M++ R  E  ++VP+ LP++
Sbjct:  165 RVPGSVVLLMGTHSDSFDSP---AECSKR-----VDCFVKGELLPLYKNFIMKRIGDECKAAADRGHAGVQDNRRYEPL----------------RVVVVKELLALNLSPSGGVTTAELREHIEGVAYG--VHDGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMFGGKATEGARVFLAAIKLHEVQGAILLTRADGGGEMEDMASEEHLVIHMNPAWFADLIRRIVDVRLLDPAQARQEKVADLIKRQPPASVGD---LSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFMFRVRQNEDHYIVPSCLPDH 519          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1413.3080.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LKS5_ECTSI7.790e-13959.69LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LK68_ECTSI3.600e-4936.93LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JR01_9PHAE4.650e-4235.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSN1_9PHAE1.020e-1222.40Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1413contigL-elsbetiae_contig1413:5917..8109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1413.3080.1mRNA_L-elsbetiae_contig1413.3080.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1413 5917..8109 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1413.3080.1 ID=prot_L-elsbetiae_contig1413.3080.1|Name=mRNA_L-elsbetiae_contig1413.3080.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=368bp
MRVPGAAIALVGSHVDNMKKEGLDADLAKKRLHEVVRKFIVDKAANTLKG
KNSRCIDTESPTTMDADHLRDGAQAVPLDDRLAQRSSSSKLSTEPLVLHD
HVFEVSLNPASVRVLREWVVKAASGRDCPRGFSFPAVDQVVPNAWIKAFY
VMDVVERTTPCVMWSEAVAKFSDAMSGTDDPSKVLLRAMQHREAEGSALL
LLADASAPGDTDMLHLDPSWLVELVRRLADHNLVDEDEKKQGIIKQQLHR
YAKEQQTDFEPLWDMHGVYCKSGHLSQDYLRFLWTYRKIDPPGPAVDLTD
IKFESIISTMVRLLVMYKARGEGDFVVPARLPEYGDQRVLPPDNIAEVVV
MVECSFGQAYPPLGIVGR
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