prot_L-elsbetiae_contig14129.3078.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14129.3078.1
Unique Nameprot_L-elsbetiae_contig14129.3078.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length87
Homology
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BLAST of mRNA_L-elsbetiae_contig14129.3078.1 vs. uniprot
Match: A0A6H5JDQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDQ5_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 8.440e-47
Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0 
Query:    1 MAKSIRSKVKKRNRTEMRKTVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPTKEVSKNGFAFRHPDAPPAFDD 87
            MAKSIRSKVKKRNRTEMRK VGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPP+KEVSK+GF+FRHPDAPP FDD
Sbjct:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKEVSKSGFSFRHPDAPPPFDD 87
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BLAST of mRNA_L-elsbetiae_contig14129.3078.1 vs. uniprot
Match: D7G0M3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M3_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 1.040e-46
Identity = 82/87 (94.25%), Postives = 85/87 (97.70%), Query Frame = 0 
Query:    1 MAKSIRSKVKKRNRTEMRKTVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPTKEVSKNGFAFRHPDAPPAFDD 87
            MAKSIRSKVKKRNRTEMRK VGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPP+KEVSK+GF+FRHPDAPP FDD
Sbjct:    1 MAKSIRSKVKKRNRTEMRKNVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPSKEVSKSGFSFRHPDAPPLFDD 87
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BLAST of mRNA_L-elsbetiae_contig14129.3078.1 vs. uniprot
Match: A0A835Z2D3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2D3_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 9.400e-22
Identity = 47/83 (56.63%), Postives = 63/83 (75.90%), Query Frame = 0 
Query:    1 MAKSIRSKVKKRNRTEMRKTVGDPHQRKLQARCTAKIQKSVAFSAGESVTKLKGMLTAAQAANPPTKEVSKNGFAFRHPDAPP 83
            MAKSIRSKVKKRNR +MRK  G+PH +++QA+CTA++Q++V + +G  + KLKG+L  AQA NP   EVSK+   F+HP A P
Sbjct:    1 MAKSIRSKVKKRNRADMRKQYGEPHAQQIQAKCTARLQETVQYHSGPGINKLKGLLNKAQAENPLQPEVSKHSHTFKHPYAKP 83
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14129.3078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JDQ5_9PHAE8.440e-4794.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0M3_ECTSI1.040e-4694.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z2D3_9STRA9.400e-2256.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019434Uncharacterised protein family UPF0642PFAMPF10338DUF2423coord: 1..41
e-value: 6.4E-9
score: 35.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14129contigL-elsbetiae_contig14129:2957..4638 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14129.3078.1mRNA_L-elsbetiae_contig14129.3078.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14129 2957..4638 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14129.3078.1 ID=prot_L-elsbetiae_contig14129.3078.1|Name=mRNA_L-elsbetiae_contig14129.3078.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp
MAKSIRSKVKKRNRTEMRKTVGDPHQRKLQARCTAKIQKSVAFSAGESVT
KLKGMLTAAQAANPPTKEVSKNGFAFRHPDAPPAFDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019434UPF0642