mRNA_L-elsbetiae_contig14122.3073.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14122.3073.1 vs. uniprot
Match: D7G5B3_ECTSI (Prefoldin subunit 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5B3_ECTSI) HSP 1 Score: 245 bits (626), Expect = 1.850e-75 Identity = 126/149 (84.56%), Postives = 143/149 (95.97%), Query Frame = 3 Query: 540 VFSKYKLMESNMDKVKQSMKEKIPEIKRSLELVKHLQERQEKKETVKTNYSLSDTVFAKAELKCDGRVCIWLGASVMVEYTYEEAVALLESNLATALDKQTTTQEDLEFLRNQIITVEVNMARMYNYDVLRRRKADEAKKMKEESKTAA 986 ++SKYKLMESNMDK KQSMK+K+PEI+RSLELV+HLQERQ+K+ETVKTNYSL+DTVFAKAELKCDGRVCIWLGASVMVEYTY+EA+ LLE NLATAL+K+ TTQEDLEFLRNQ ITVEVNMAR+YNYDVLRRRKA+EAKK KEE+K+AA Sbjct: 60 LYSKYKLMESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFAKAELKCDGRVCIWLGASVMVEYTYKEALELLERNLATALEKKKTTQEDLEFLRNQSITVEVNMARLYNYDVLRRRKAEEAKKRKEEAKSAA 208
BLAST of mRNA_L-elsbetiae_contig14122.3073.1 vs. uniprot
Match: A0A835ZGV7_9STRA (Prefoldin subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGV7_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.350e-41 Identity = 81/133 (60.90%), Postives = 108/133 (81.20%), Query Frame = 3 Query: 540 VFSKYKLMESNMDKVKQSMKEKIPEIKRSLELVKHLQERQEKKETVKTNYSLSDTVFAKAELKCDGRVCIWLGASVMVEYTYEEAVALLESNLATALDKQTTTQEDLEFLRNQIITVEVNMARMYNYDVLRRR 938 ++SKYK+ E+N+++ + +MK KIPEI+RSL+LVKHL ++QE+ E V+T+Y+L+DTV+ KAEL DG VCIWLGA+VM+EY+YEEA LL +LA A K T EDL+ LRN IITVEVNMAR++N+DV RRR Sbjct: 73 LYSKYKMFETNLERTRSNMKAKIPEIERSLDLVKHLIQKQEEDEKVQTHYNLADTVYGKAELTGDGCVCIWLGANVMLEYSYEEAHELLVKSLANAEQKLVETVEDLQLLRNNIITVEVNMARIFNWDVKRRR 205
BLAST of mRNA_L-elsbetiae_contig14122.3073.1 vs. uniprot
Match: A0A0N7L5Y1_PLAHL (Prefoldin subunit 3 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5Y1_PLAHL) HSP 1 Score: 147 bits (372), Expect = 4.920e-38 Identity = 74/144 (51.39%), Postives = 110/144 (76.39%), Query Frame = 3 Query: 540 VFSKYKLMESNMDKVKQSMKEKIPEIKRSLELVKHLQERQEKKETVKTNYSLSDTVFAKAELKCD-GRVCIWLGASVMVEYTYEEAVALLESNLATALDKQTTTQEDLEFLRNQIITVEVNMARMYNYDVLRRRKADEAKKMKE 968 ++SKYK ME+N+ K +++ K KIPE ++ L++V+HL ++++ ET++T ++L+D V+A A + C G+VCIWLGA VMVEY+YEEA LLE N+ATA +K +EDL FLR+QIIT EVN+AR++N+DV RRR+ + K + E Sbjct: 60 MYSKYKFMETNLQKNRETFKRKIPETQKDLDMVQHLMTKRDEGETLQTQFNLADNVYANASVDCSLGKVCIWLGAQVMVEYSYEEAQELLEKNMATASEKLAQIEEDLSFLRDQIITTEVNIARIFNHDVRRRRQEKDTKVVTE 203
BLAST of mRNA_L-elsbetiae_contig14122.3073.1 vs. uniprot
Match: W7T596_9STRA (Prefoldin subunit 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T596_9STRA) HSP 1 Score: 147 bits (372), Expect = 6.190e-38 Identity = 73/133 (54.89%), Postives = 106/133 (79.70%), Query Frame = 3 Query: 540 VFSKYKLMESNMDKVKQSMKEKIPEIKRSLELVKHLQERQEKKETVKTNYSLSDTVFAKAELKCDGRVCIWLGASVMVEYTYEEAVALLESNLATALDKQTTTQEDLEFLRNQIITVEVNMARMYNYDVLRRR 938 ++ K K +E+++ +VK SMK KIPEI+++LELV L+ +Q + E + T+Y+L+DT++AKAE+ C GRVC+WLGA+VM+EY+YEEA +LE++L A +K TT EDLE L+NQ T+EVNMAR++NYDV RR+ Sbjct: 59 LYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACHGRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKLKTTNEDLEHLKNQTTTIEVNMARLFNYDVKRRK 191
BLAST of mRNA_L-elsbetiae_contig14122.3073.1 vs. uniprot
Match: A0A7S2Y0F3_9STRA (Prefoldin subunit 3 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0F3_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.260e-37 Identity = 79/136 (58.09%), Postives = 106/136 (77.94%), Query Frame = 3 Query: 549 KYKLMESNMDKVKQSMKEKIPEIKRSLELVKHLQERQEKKETVKTNYSLSDTVFAKAELKCD-GRVCIWLGASVMVEYTYEEAVALLESNLATALDKQTTTQEDLEFLRNQIITVEVNMARMYNYDVLRRRKADEA 953 KYK MES + K S +K+PEI+R++ LVK+L E +E +E V YSL+DTV+AKA+++ G+VC+WLGA+VMVEYTY+EA+ LLE+NL A +K+ TT EDLEFLRNQ+ITVEVNMAR++N++V RR EA Sbjct: 64 KYKFMESQQIQHKASYMQKVPEIERAISLVKYLVENKESEEDVIATYSLADTVYAKAKIEHQQGKVCLWLGANVMVEYTYDEALTLLEANLQKAKEKRATTTEDLEFLRNQVITVEVNMARVFNHNVKLRRLLAEA 199
BLAST of mRNA_L-elsbetiae_contig14122.3073.1 vs. uniprot
Match: A0A5D6YMX9_9STRA (Prefoldin subunit 3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YMX9_9STRA) HSP 1 Score: 143 bits (360), Expect = 2.760e-36 Identity = 71/135 (52.59%), Postives = 103/135 (76.30%), Query Frame = 3 Query: 540 VFSKYKLMESNMDKVKQSMKEKIPEIKRSLELVKHLQERQEKKETVKTNYSLSDTVFAKAELKCD-GRVCIWLGASVMVEYTYEEAVALLESNLATALDKQTTTQEDLEFLRNQIITVEVNMARMYNYDVLRRRK 941 ++SKYK ME+N+ K ++S K K+PE ++ L +KHL E+Q+ E++ T ++L+D V+AKA + C G+VCIWLGA+VMVEY+YEEA+ LL+ N+A+A D+ DL FLR+ IIT EVN+AR++N+DV RRRK Sbjct: 62 LYSKYKFMETNLQKSRESFKRKVPETEKDLAALKHLMEKQDAGESISTRFNLADNVYAKATVDCSVGKVCIWLGANVMVEYSYEEALELLQHNIASANDRLAQIDADLAFLRDAIITTEVNIARIFNHDVRRRRK 196
BLAST of mRNA_L-elsbetiae_contig14122.3073.1 vs. uniprot
Match: A0A2D4CEL1_PYTIN (Prefoldin subunit 3 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEL1_PYTIN) HSP 1 Score: 143 bits (360), Expect = 2.840e-36 Identity = 73/135 (54.07%), Postives = 104/135 (77.04%), Query Frame = 3 Query: 540 VFSKYKLMESNMDKVKQSMKEKIPEIKRSLELVKHLQERQEKKETVKTNYSLSDTVFAKAELKCD-GRVCIWLGASVMVEYTYEEAVALLESNLATALDKQTTTQEDLEFLRNQIITVEVNMARMYNYDVLRRRK 941 ++SKYK ME N+ K + S K KIPE ++ LE+++HL ++QE+ E ++T++SL+D V+AKA + G+VCIWLGA+VMVEYTYEEA+ LLE N+ A ++ + DL FLR+QIIT EVN+AR++N+DV RRRK Sbjct: 63 LYSKYKFMEVNLQKNRDSFKRKIPETEKDLEMLRHLLQKQEEGENIQTHFSLADNVYAKATVDSSVGKVCIWLGANVMVEYTYEEALELLEGNVKIATERLEQLESDLGFLRDQIITTEVNIARIFNHDVRRRRK 197
BLAST of mRNA_L-elsbetiae_contig14122.3073.1 vs. uniprot
Match: A0A067CG55_SAPPC (Prefoldin subunit 3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CG55_SAPPC) HSP 1 Score: 142 bits (358), Expect = 3.380e-36 Identity = 73/134 (54.48%), Postives = 105/134 (78.36%), Query Frame = 3 Query: 540 VFSKYKLMESNMDKVKQSMKEKIPEIKRSLELVKHLQERQEKKETVKTNYSLSDTVFAKAELKCDGR-VCIWLGASVMVEYTYEEAVALLESNLATALDKQTTTQEDLEFLRNQIITVEVNMARMYNYDVLRRR 938 ++SKYK ME+N+ K KQS K KIP+ ++ L +++HL +EK E ++T++SL+D VFA A + D + VCIWLGA+VMVEY+++EA+ALL+SNL+TA + + + DL FLR+QIIT EVNMAR++N+DV RRR Sbjct: 48 LYSKYKFMETNLTKSKQSFKTKIPDTEKDLAMLEHLMASREKDEPIETHFSLADNVFANATIDADVQTVCIWLGANVMVEYSFDEALALLQSNLSTATSRLSQIEADLGFLRDQIITTEVNMARIFNFDVRRRR 181
BLAST of mRNA_L-elsbetiae_contig14122.3073.1 vs. uniprot
Match: A0A485L9G8_9STRA (Prefoldin subunit 3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9G8_9STRA) HSP 1 Score: 142 bits (357), Expect = 3.950e-36 Identity = 72/134 (53.73%), Postives = 105/134 (78.36%), Query Frame = 3 Query: 540 VFSKYKLMESNMDKVKQSMKEKIPEIKRSLELVKHLQERQEKKETVKTNYSLSDTVFAKAELKCDGR-VCIWLGASVMVEYTYEEAVALLESNLATALDKQTTTQEDLEFLRNQIITVEVNMARMYNYDVLRRR 938 +FSKYK ME+N+ K KQS+K K+P+ ++ L +++HL ++EK+E ++T++SL+D VFAKA + D + VCIWLGA+VMVEY+++EA+ LL NL TA+ + + DL FLR+QIIT EVNMAR++N+DV RRR Sbjct: 48 LFSKYKFMETNLTKSKQSLKIKVPDTQKDLAMLEHLISQREKEENIETHFSLADNVFAKATIDADVKTVCIWLGANVMVEYSFDEALELLNGNLKTAVQRLEQIESDLGFLRDQIITTEVNMARIFNFDVRRRR 181
BLAST of mRNA_L-elsbetiae_contig14122.3073.1 vs. uniprot
Match: A0A484E4G4_BRELC (Prefoldin subunit 3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E4G4_BRELC) HSP 1 Score: 142 bits (359), Expect = 4.070e-36 Identity = 71/134 (52.99%), Postives = 106/134 (79.10%), Query Frame = 3 Query: 540 VFSKYKLMESNMDKVKQSMKEKIPEIKRSLELVKHLQERQEKKETVKTNYSLSDTVFAKAELKCD-GRVCIWLGASVMVEYTYEEAVALLESNLATALDKQTTTQEDLEFLRNQIITVEVNMARMYNYDVLRRR 938 ++SKYK ME+++ K +++ K KIP+ ++ L++V+HL ++++ ET++T++SL+D V+AKA + C G+VCIWLGA VMVEY Y EA LLESN+A+A +K +EDL FLR+QIIT EVN+AR++N+DV RRR Sbjct: 64 MYSKYKFMETSLQKNRETFKRKIPDTQKDLDMVRHLVAKKDEGETLQTHFSLADNVYAKASVDCQIGKVCIWLGAQVMVEYPYGEAQELLESNVASATEKLAQIEEDLSFLRDQIITTEVNIARIFNHDVRRRR 197 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14122.3073.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14122.3073.1 >prot_L-elsbetiae_contig14122.3073.1 ID=prot_L-elsbetiae_contig14122.3073.1|Name=mRNA_L-elsbetiae_contig14122.3073.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=143bp MESNMDKVKQSMKEKIPEIKRSLELVKHLQERQEKKETVKTNYSLSDTVFback to top mRNA from alignment at L-elsbetiae_contig14122:619..4029- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14122.3073.1 ID=mRNA_L-elsbetiae_contig14122.3073.1|Name=mRNA_L-elsbetiae_contig14122.3073.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3411bp|location=Sequence derived from alignment at L-elsbetiae_contig14122:619..4029- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14122:619..4029- >mRNA_L-elsbetiae_contig14122.3073.1 ID=mRNA_L-elsbetiae_contig14122.3073.1|Name=mRNA_L-elsbetiae_contig14122.3073.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=858bp|location=Sequence derived from alignment at L-elsbetiae_contig14122:619..4029- (Laminarionema elsbetiae ELsaHSoW15)back to top |