prot_L-elsbetiae_contig14111.3067.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig14111.3067.1
Unique Name	prot_L-elsbetiae_contig14111.3067.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	121

Homology

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BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: D8LD63_ECTSI (Rhomboid-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD63_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 2.040e-74
Identity = 108/121 (89.26%), Postives = 117/121 (96.69%), Query Frame = 0

Query:    1 TLQTLIALGGKHLTLIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTWHEEDEFGKGAQLTQV 121
            +++TL+ALG KHLTLIQEGQVWRL+TPILLHGGVLHIFMNL+SQFRMGTFLEERWGT NWL+VYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMG WLSHV+CTW+EEDEF KGAQLTQV
Sbjct:  210 SIETLMALGAKHLTLIQEGQVWRLLTPILLHGGVLHIFMNLTSQFRMGTFLEERWGTRNWLIVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGAWLSHVLCTWNEEDEFAKGAQLTQV 330

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BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A7S2THN5_9EUKA (Rhomboid-like protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2THN5_9EUKA)

HSP 1 Score: 110 bits (274), Expect = 1.060e-26
Identity = 49/104 (47.12%), Postives = 72/104 (69.23%), Query Frame = 0

Query:    3 QTLIALGGKHLTLIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTW 106
            QT   +G K+L  IQEGQV+R VTPI+LHGG+LH+  NL  Q R+G   E RWG  N+++ Y + G+G +  SC+ SP+ + VGASGA++ ++G  +S++I  W
Sbjct:  122 QTFKYMGAKYLPCIQEGQVYRFVTPIVLHGGILHLASNLFFQCRVGFIFELRWGLANYILTYVLTGIGASYFSCLMSPNSISVGASGALFGLIGADISYLIMNW 225

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BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A7S0H3J0_9EUKA (Rhomboid-like protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H3J0_9EUKA)

HSP 1 Score: 108 bits (270), Expect = 4.380e-26
Identity = 52/119 (43.70%), Postives = 76/119 (63.87%), Query Frame = 0

Query:    3 QTLIALGGKHLTLIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTWHEEDEFGKGAQLTQV 121
            QT + +G K+L  I+EGQV+R ++PILLHGG+LH+  NL  Q R+G   E RWG  N++++Y + GLG +  SC+ SP  + VGASGA++ + G  LS++I  W       K  +L  V
Sbjct:  132 QTFLYMGAKYLPDIKEGQVFRFISPILLHGGILHLASNLFFQCRVGFIFELRWGLVNYVLIYLLTGLGASYFSCLISPKSISVGASGALFGLTGADLSYLIMNWRYLPNQEKFQELCMV 250

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BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A6T6G4P5_9STRA (Rhomboid-like protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6G4P5_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.520e-26
Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 0

Query:    9 GGKH-LTLIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTWHEEDEFGKG 115
            GGK+   +++E + WRL+TPI+LH GV+H+  N++ Q   G F E  WG+ NWL++Y    LG ++LS +A PD + VG+SGA+  + GG L+ VIC   E D+  +G
Sbjct:  224 GGKNAFNILEEHEWWRLITPIMLHAGVIHLLCNIAVQLETGAFFEREWGSTNWLIIYLTSALGSSVLSVIAMPDAISVGSSGAVMGLFGGKLAEVICRCCESDKTEQG 331

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BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A7S2UJ45_9STRA (Rhomboid-like protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJ45_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.890e-24
Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 0

Query:    9 GGKHLTLI-QEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVI 103
            GGK+  LI  E ++WRLVTP+ LH GV+H+F NL+ Q   G F E  WG+  WL VY V  LGG ++SCV  PD++ VG+SGA+  + G  LS  +
Sbjct:  312 GGKNAYLIIDELKLWRLVTPVFLHAGVIHLFCNLAIQLETGAFFEREWGSARWLAVYLVSSLGGTIMSCVLDPDRISVGSSGALMGLFGAKLSEFL 407

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BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A6U0S1P1_9STRA (Rhomboid-like protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0S1P1_9STRA)

HSP 1 Score: 103 bits (256), Expect = 6.250e-24
Identity = 44/104 (42.31%), Postives = 67/104 (64.42%), Query Frame = 0

Query:    9 GGKH-LTLIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTWHEEDE 111
            G K+ L ++ +G+ WRL+TP+LLH G+LH+  N+  Q+ +G F E+ WG+  WL+VY   G+G ++LS    PD + VG+SGAI  + G  LS +   W+E  E
Sbjct:  111 GAKNALKILDDGENWRLLTPVLLHAGILHLIGNVHVQWDLGVFFEKEWGSAAWLIVYLTSGVGSSILSVYCMPDNISVGSSGAIMGLFGAKLSEIFVKWYEPRE 214

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BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A7S2R6S9_9STRA (Rhomboid-like protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6S9_9STRA)

HSP 1 Score: 103 bits (258), Expect = 8.140e-24
Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = 0

Query:    8 LGGKHLTLIQ-EGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTWHE--EDEFGK 114
            LG K+  LI    Q WRL TP+LLH G +H+ +N+  Q R+G  LE +WG   + ++Y   G    +LSC+A PD +GVG+SGAI  I+G WL+ ++C W    E+E G+
Sbjct:  211 LGAKNAALIAYRNQWWRLFTPMLLHAGFIHLAVNVLIQVRIGVILEYQWGIAIYTIIYITSGFLSAILSCIALPDSLGVGSSGAIMGILGAWLAEIVCAWSSTPEEELGQ 320

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BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A812VT23_9DINO (Rhomboid-like protease n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812VT23_9DINO)

HSP 1 Score: 102 bits (255), Expect = 1.490e-23
Identity = 50/117 (42.74%), Postives = 72/117 (61.54%), Query Frame = 0

Query:    9 GGKHLT-LIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTWHE---EDEFGKGAQLTQV 121
            GGK+   ++ +G+ WRL +  +LH G +H+  NL  Q   G  LE  WG   WLVVY+V G+  NLLSCV  PD +GVG+SG +  ++GGWLS +  TW++    D   + AQ+T +
Sbjct:  180 GGKNAAKILLQGEWWRLASATMLHAGWIHLAGNLVVQLHAGIQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSI 296

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BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A7S0C3J6_9STRA (Rhomboid-like protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3J6_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.970e-23
Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 0

Query:    9 GGKHLTLI-QEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVIC 104
            GGK+  L+  E + WRL++P++LH GVLH+  N++ Q   G F E  WG+  WLVVY    +GG LLSCVA PD V VG+SGA+  + G  ++ V C
Sbjct:  111 GGKNAYLVVNEYEYWRLLSPVVLHSGVLHLLGNVAIQLETGAFFEREWGSQIWLVVYLSSAMGGTLLSCVAEPDSVSVGSSGAVMGLFGAKIAEVFC 207

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BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Match: A0A812XH88_9DINO (Rhomboid-like protease n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XH88_9DINO)

HSP 1 Score: 102 bits (254), Expect = 6.560e-23
Identity = 50/117 (42.74%), Postives = 71/117 (60.68%), Query Frame = 0

Query:    9 GGKHLT-LIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTFLEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLSHVICTWHE---EDEFGKGAQLTQV 121
            GGK+   ++ +G  WRL +  +LH G +H+  NL  Q   G  LE  WG   WLVVY+V G+  NLLSCV  PD +GVG+SG +  ++GGWLS +  TW++    D   + AQ+T +
Sbjct:  448 GGKNAAKILLQGDWWRLASATMLHAGWIHLAGNLVVQLHAGVQLEVIWGPTAWLVVYFVSGIYANLLSCVLHPDTIGVGSSGCLCGLIGGWLSFIFITWNQTLPSDIKMRNAQVTSI 564

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig14111.3067.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LD63_ECTSI	2.040e-74	89.26	Rhomboid-like protein n=1 Tax=Ectocarpus siliculos...	[more]
A0A7S2THN5_9EUKA	1.060e-26	47.12	Rhomboid-like protein n=1 Tax=Lotharella oceanica ...	[more]
A0A7S0H3J0_9EUKA	4.380e-26	43.70	Rhomboid-like protein n=1 Tax=Amorphochlora amoebi...	[more]
A0A6T6G4P5_9STRA	5.520e-26	43.52	Rhomboid-like protein n=1 Tax=Craspedostauros aust...	[more]
A0A7S2UJ45_9STRA	3.890e-24	48.96	Rhomboid-like protein (Fragment) n=1 Tax=Attheya s...	[more]
A0A6U0S1P1_9STRA	6.250e-24	42.31	Rhomboid-like protein n=1 Tax=Eucampia antarctica ...	[more]
A0A7S2R6S9_9STRA	8.140e-24	43.64	Rhomboid-like protein n=1 Tax=Rhizochromulina mari...	[more]
A0A812VT23_9DINO	1.490e-23	42.74	Rhomboid-like protease n=2 Tax=unclassified Symbio...	[more]
A0A7S0C3J6_9STRA	1.970e-23	47.42	Rhomboid-like protein n=1 Tax=Proboscia inermis Ta...	[more]
A0A812XH88_9DINO	6.560e-23	42.74	Rhomboid-like protease n=1 Tax=Symbiodinium sp. KB...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 16..108 e-value: 9.9E-26 score: 90.5
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 1..118 e-value: 1.5E-25 score: 91.8
None	No IPR available	PANTHER	PTHR22936:SF69	RHOMBOID-LIKE PROTEIN	coord: 3..113
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..39
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 40..121
None	No IPR available	SUPERFAMILY	144091	Rhomboid-like	coord: 4..107
None	No IPR available	TMHMM	TMhelix		coord: 55..77
None	No IPR available	TMHMM	TMhelix		coord: 84..106
None	No IPR available	TMHMM	TMhelix		coord: 21..40
IPR002610	Peptidase S54, rhomboid	PANTHER	PTHR22936	RHOMBOID-RELATED	coord: 3..113

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig14111	contig	L-elsbetiae_contig14111:2092..4352 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig14111.3067.1	mRNA_L-elsbetiae_contig14111.3067.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig14111 2092..4352 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig14111.3067.1 ID=prot_L-elsbetiae_contig14111.3067.1|Name=mRNA_L-elsbetiae_contig14111.3067.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp
TLQTLIALGGKHLTLIQEGQVWRLVTPILLHGGVLHIFMNLSSQFRMGTF
LEERWGTGNWLVVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGGWLS
HVICTWHEEDEFGKGAQLTQV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022764	Peptidase_S54_rhomboid_dom
IPR035952	Rhomboid-like_sf
IPR002610	Peptidase_S54_rhomboid