prot_L-elsbetiae_contig1410.3061.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1410.3061.1
Unique Nameprot_L-elsbetiae_contig1410.3061.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length232
Homology
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BLAST of mRNA_L-elsbetiae_contig1410.3061.1 vs. uniprot
Match: A0A7S0ARY5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ARY5_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.440e-6
Identity = 25/71 (35.21%), Postives = 45/71 (63.38%), Query Frame = 0 
Query:    1 AWLERRLDLDRQAVSKIIWKEPALFRPSIDLLETKLVWLREGLALEEPDIARLVRSNPNVLSYSVEENLEP 71
            A L+ RL ++++A  ++      L   S + LETK+ WL+  L + +  + ++V+  P+VL+YS+E+NLEP
Sbjct:    3 ALLQERLGINKKAAGRLCLNANRLLTFSFETLETKIDWLQAKLKINKTQMRKIVKRAPHVLTYSIEDNLEP 73
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1410.3061.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S0ARY5_9STRA1.440e-635.21Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 88..120
e-value: 0.048
score: 22.8
coord: 125..157
e-value: 20.0
score: 14.1
coord: 15..46
e-value: 600.0
score: 5.6
coord: 51..83
e-value: 2.9E-5
score: 33.5
coord: 162..193
e-value: 180.0
score: 9.7
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 50..176
e-value: 5.5E-16
score: 58.4
coord: 6..78
e-value: 1.7E-5
score: 23.9
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10coord: 1..214
e-value: 1.7E-30
score: 108.1
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 39..114
coord: 103..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1410contigL-elsbetiae_contig1410:20323..24664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1410.3061.1mRNA_L-elsbetiae_contig1410.3061.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1410 20323..24666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1410.3061.1 ID=prot_L-elsbetiae_contig1410.3061.1|Name=mRNA_L-elsbetiae_contig1410.3061.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=232bp
AWLERRLDLDRQAVSKIIWKEPALFRPSIDLLETKLVWLREGLALEEPDI
ARLVRSNPNVLSYSVEENLEPTVAWLQNRMKLDRKGVAAVVLSFPTILGL
NPETNIEPKLAWLKESLDLDEELVLRVVTAQPTVLKYSSKSNLGPTLDFF
GKELGGSREEIREAVVSNCRLLSASVTKRMIPRAAMIEKAGLGPPVFREH
VNAIASYTDLHFLKWLHSLVLEQGIPPRRKLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
IPR038538MTERF_sf