prot_L-elsbetiae_contig10.30.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10.30.1
Unique Nameprot_L-elsbetiae_contig10.30.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length519
Homology
BLAST of mRNA_L-elsbetiae_contig10.30.1 vs. uniprot
Match: A0A514CPJ3_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A514CPJ3_9STRA)

HSP 1 Score: 724 bits (1868), Expect = 2.490e-257
Identity = 367/508 (72.24%), Postives = 424/508 (83.46%), Query Frame = 0
Query:    1 MSINAWKDIDWSLIDKRIFRYQTRIYKATRDRNISKVKCLQKRLLKSLDAKLNAVRRVTTLNKGRKISGSDRQIFVTDKEKIKLVKRLRLNGKALSIYRVYIPERGKLENPPLDIPTLEDRAKQALCKLALEPEWEARFEANSYGFRPGRSYQDAMESILSSLQNSSSDKSYHKYVLGANISKCFDRIDHTYLLKKLDTLPEMETQVKAWLKAGILDELVIGKRFEGTITLKKQEEIIKGGILSTLLSNIALHGMEDYMTNWICTQPSFAKTNIYNKDAKRKSLVVIRYADDFVIIHKNETIIRQAKEEISNWLWKGPRLVLNEEKTFIRDTNNGFNFLGFTCITITRGSTLRAKIYPSKLSQAQLLLKVRNTIINNRSASNYILISLLFPIIMSWANYFCFFECSQCFTKLSHLISQKLRAWVFRRDTRNGRKVVKERNFPNDKCYHFNGIKHIDNWVLNGKMIIQLGETKEIWLPHIRWIQSKKWVKIKGDYSPYNGDNLYWEKRT 508
            MSI AWKDI+WSL DKRI RYQTRIYKA RD NISKVKCLQKRLLKS DAKL AVRRVTTLNKG+   G D QI+VTD EKIKLVKRLRL+GKAL I R YIP+ GK E  PL IPT+ DRAKQALCKLALEPEWEARFE NSYG RPGR+ QDAME+I +SL+N S+DK YHKYVL A+ISKCFD+IDHTYLLKKL+TLPEME QVKAWLKAGI++E    K++      + Q+   +GGI+S LLSNI LHGME++M +WICT+PSFAKTN Y+K AKRKSL +IRY D+FVIIHK+E IIR+AK EIS WLW GPRLVL+EEKT IR+TN  F+FLGFTCITITRGS+ RAKIYPS+LSQA+LLLKVR  +INNR+AS+Y LI+LL P+I+ WANYF F ECS  F+KL+HLI QKLRAWVFRRDTRNG+K VK+R FP++K Y F+G KH DNWVL+GK + + G  KE WLPH+ W++S+KWVKI GDYSPYNGDNLYW KRT
Sbjct:    1 MSIPAWKDINWSLTDKRILRYQTRIYKAARDGNISKVKCLQKRLLKSPDAKLIAVRRVTTLNKGKTTPGIDGQIYVTDIEKIKLVKRLRLDGKALPIRRAYIPKPGKTEKRPLGIPTVGDRAKQALCKLALEPEWEARFEINSYGSRPGRNCQDAMEAIFTSLRNHSNDKGYHKYVLDADISKCFDQIDHTYLLKKLNTLPEMEAQVKAWLKAGIMEEFSKTKQWNDIS--ENQKGTPQGGIISPLLSNITLHGMEEHMKDWICTKPSFAKTNKYSKIAKRKSLSIIRYVDNFVIIHKDENIIREAKAEISKWLWDGPRLVLSEEKTAIRNTNKSFDFLGFTCITITRGSSTRAKIYPSRLSQARLLLKVRQIVINNRNASSYNLINLLRPVIIGWANYFRFSECSSIFSKLTHLIFQKLRAWVFRRDTRNGKKEVKQRYFPSNKTYLFDGTKHQDNWVLHGKQLGKSGIGKENWLPHLSWVKSRKWVKILGDYSPYNGDNLYWGKRT 506          
BLAST of mRNA_L-elsbetiae_contig10.30.1 vs. uniprot
Match: UPI001EDDE7DD (hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=UPI001EDDE7DD)

HSP 1 Score: 640 bits (1652), Expect = 2.750e-224
Identity = 324/514 (63.04%), Postives = 401/514 (78.02%), Query Frame = 0
Query:    1 MSINAWKDIDWSLIDKRIFRYQTRIYKATRDRNISKVKCLQKRLLKSLDAKLNAVRRVTTLNKGRKISGSDRQIFVTDKEKIKLVKRLRLNGKALSIYRVYIPERGKLENPPLDIPTLEDRAKQALCKLALEPEWEARFEANSYGFRPGRSYQDAMESILSSLQNSSSDKSYHKYVLGANISKCFDRIDHTYLLKKLDTLPEMETQVKAWLKAGILDEL------VIGKRFEGTITLKKQEEIIKGGILSTLLSNIALHGMEDYMTNWICTQPSFAKTNIYNKDAKRKSLVVIRYADDFVIIHKNETIIRQAKEEISNWLWKGPRLVLNEEKTFIRDTNNGFNFLGFTCITITRGSTLRAKIYPSKLSQAQLLLKVRNTIINNRSASNYILISLLFPIIMSWANYFCFFECSQCFTKLSHLISQKLRAWVFRRDTRNGRKVVKERNFPNDKCYHFNGIKHIDNWVLNGKMIIQLGETKEIWLPHIRWIQSKKWVKIKGDYSPYNGDNLYWEKRT 508
            MSI AWK I+W+ ++ R+ RYQTRIYKA+RD N  KV+CLQKRLL+SLDAKL AVRRVTTLNKG++  G D++IFVTD +K KLV++L+L+GKA  I RVYI + GK +  PL IP +EDRAKQALC LALEPEWEARFE NSYGFRPGRS  DA+ESI  +L+N S DKS+HKY+L  +IS CFD+IDH YL+ KL+T+PE+E QVKAWLKA I +E+       I K  +GT          +G I+S LL+NIALHGME+++ +WICT+PSF KTN Y+K+AKRKSL +IRYADDFVIIHK ++II++AKEEI+ WL  GPRL ++E KT I D+N GF+FLGF+ ITITRG   R KIYPS+ SQA LL KVRN I NNRSAS Y LI  L P+I+ WANYF F EC + F KL+HLI QKLRAWVFRRDTRNGR  +K+R FP+ K Y+++GI+H DNW L GK + + G+ +EIWLPH+ W++SKKWVKIK D SP++GDN+YW KRT
Sbjct:    1 MSIIAWKTINWTQVEFRVRRYQTRIYKASRDNNSPKVRCLQKRLLRSLDAKLMAVRRVTTLNKGKRTPGIDKKIFVTDNQKGKLVQKLKLDGKASPIKRVYIEKPGKKDKRPLGIPIIEDRAKQALCLLALEPEWEARFEPNSYGFRPGRSCHDAIESIFINLRNISGDKSFHKYILDVDISNCFDKIDHNYLMTKLETIPEIENQVKAWLKADIFEEIQASKMDYISKSIQGTP---------QGRIISPLLANIALHGMENHLKDWICTKPSFGKTNTYSKNAKRKSLAIIRYADDFVIIHKEKSIIQEAKEEIAKWLRNGPRLEISEAKTSIVDSNEGFDFLGFSIITITRGRP-RVKIYPSRKSQATLLFKVRNIIQNNRSASTYNLILTLRPVIIGWANYFRFSECQKVFHKLTHLIHQKLRAWVFRRDTRNGRMKIKQRYFPSGKTYYYDGIRHQDNWTLTGKQLGKEGKMQEIWLPHMVWVKSKKWVKIKADKSPFDGDNVYWAKRT 504          
BLAST of mRNA_L-elsbetiae_contig10.30.1 vs. uniprot
Match: A0A8F8X858_9STRA (Putative reverse transcriptase n=1 Tax=Climaconeis cf. scalaris TaxID=2846828 RepID=A0A8F8X858_9STRA)

HSP 1 Score: 602 bits (1552), Expect = 1.570e-210
Identity = 304/508 (59.84%), Postives = 391/508 (76.97%), Query Frame = 0
Query:    1 MSINAWKDIDWSLIDKRIFRYQTRIYKATRDRNISKVKCLQKRLLKSLDAKLNAVRRVTTLNKGRKISGSDRQIFVTDKEKIKLVKRLRLNGKALSIYRVYIPERGKLENPPLDIPTLEDRAKQALCKLALEPEWEARFEANSYGFRPGRSYQDAMESILSSLQNSSSDKSYHKYVLGANISKCFDRIDHTYLLKKLDTLPEMETQVKAWLKAGILDELV-IGKRFEGTITLKKQEEIIKGGILSTLLSNIALHGMEDYMTNWICTQPSFAKTNIYNKDAKRKSLVVIRYADDFVIIHKNETIIRQAKEEISNWLWKGPRLVLNEEKTFIRDTNNGFNFLGFTCITITRGSTLRAKIYPSKLSQAQLLLKVRNTIINNRSASNYILISLLFPIIMSWANYFCFFECSQCFTKLSHLISQKLRAWVFRRDTRNGRKVVKERNFPNDKCYHFNGIKHIDNWVLNGKMIIQLGETKEIWLPHIRWIQSKKWVKIKGDYSPYNGDNLYWEKR 507
            MS  AWK+I+WSL++ RI RYQTRI+KA+++ NI K++C+QKRLL SLDAKL AVRRVTTLN  + I+G ++++F+TD +K KLV++LRL+GKALSI  + I + GK E  PL I   +DRAK+ALC LALEPEWEA+FE NSYGFRPGR   D +E+IL SL+N S +  YHKY+L   ISK FD+IDH YL++KL+TLPEME+ VK WLK G+L++ + I K+   T T++      +G I+  LL+NIALHG+ED+M  WICT+ SFAKT++Y K  KRK++ VIRY +DF+IIH+++TII +AK+EI +WL  GP L LNEEKT IR++N GFNFLGFT ITI   +  RAKIYPS+ SQ  L+LKVRN I  NR+ S Y LIS+L PII+ WANYF + EC +CF KL+HLI Q+LRAWVFRRDTRNGRK VK+R FP+ K Y+F G KH DNWVLNGK   + G  +E WLPH+ W++++KWV+IK D SP++GDNLYW KR
Sbjct:    1 MSSLAWKNINWSLVNSRIQRYQTRIFKASKENNIYKIRCIQKRLLNSLDAKLVAVRRVTTLNNSKIIAGIEKRVFITDLQKEKLVRKLRLDGKALSIRHLSIDKTGKAEKCPLSISIAKDRAKEALCLLALEPEWEAKFEINSYGFRPGRCCHDVIETILLSLRNHSGENHYHKYILEGTISKWFDQIDHEYLVEKLNTLPEMESHVKTWLKVGVLEDFLDINKK---TNTIENIMARPQGEIIFPLLTNIALHGLEDHMKEWICTKSSFAKTSLYPKSGKRKNISVIRYENDFIIIHQDKTIINEAKKEIYHWLLNGPHLKLNEEKTSIRNSNEGFNFLGFTFITIQSSNKTRAKIYPSRKSQELLILKVRNVIQRNRNVSAYNLISVLRPIIIGWANYFRYSECKKCFQKLTHLIFQQLRAWVFRRDTRNGRKEVKQRYFPSGKEYYFGGRKHKDNWVLNGKTKDKNGNIQENWLPHLTWVKNEKWVQIKIDKSPFDGDNLYWRKR 505          
BLAST of mRNA_L-elsbetiae_contig10.30.1 vs. uniprot
Match: A0A8F8SPV3_9STRA (Putative reverse transcriptase n=1 Tax=Climaconeis cf. scalaris TaxID=2846828 RepID=A0A8F8SPV3_9STRA)

HSP 1 Score: 572 bits (1473), Expect = 1.520e-198
Identity = 285/507 (56.21%), Postives = 379/507 (74.75%), Query Frame = 0
Query:    1 MSINAWKDIDWSLIDKRIFRYQTRIYKATRDRNISKVKCLQKRLLKSLDAKLNAVRRVTTLNKGRKISGSDRQIFVTDKEKIKLVKRLRLNGKALSIYRVYIPERGKLENPPLDIPTLEDRAKQALCKLALEPEWEARFEANSYGFRPGRSYQDAMESILSSLQNSSSDKSYHKYVLGANISKCFDRIDHTYLLKKLDTLPEMETQVKAWLKAGILDELVIGKRFEGTITLKKQEEIIKGGILSTLLSNIALHGMEDYMTNWICTQPSFAKTNIYNKDAKRKSLVVIRYADDFVIIHKNETIIRQAKEEISNWLWKGPRLVLNEEKTFIRDTNNGFNFLGFTCITITRGSTLRAKIYPSKLSQAQLLLKVRNTIINNRSASNYILISLLFPIIMSWANYFCFFECSQCFTKLSHLISQKLRAWVFRRDTRNGRKVVKERNFPNDKCYHFNGIKHIDNWVLNGKMIIQLGETKEIWLPHIRWIQSKKWVKIKGDYSPYNGDNLYWEKR 507
            MS  AWK I+WSL++ RI RYQTRI+KA+++ NI K++C+QKRLL SLDAKL AVR+VTTLNK + I G D+Q F+T+ EK KLV++LRL+GKAL I  V I + GK +  P  +P  +DRAK+ LC LALEPEWEA+FE NSYGFRPGR   DAM++IL +++N S +  Y KY+L A+I+KCFD+ID+ Y+++KL+TLPE++ QVKAWL  G+L+  +   + + T  ++     ++GGI+S L++NI LHG+E +M  WI T+PSF K ++Y+K AK KSL VI Y DDFV IH+++TII++AK+EIS+WL  GP L LNEEKT IR++N GFNFLGFT I I R +  RAKIYPS   Q  L+LKVRN I  NR+ S Y LI +L PII+ WANYF +  C +CF KL+HLI Q+LR+W+FRRDTRNGRK VK+R FP  K Y+F+G  H DNW+LNGK   +    K+ WLPH+ W++ +KW+K+K + S ++GDNLYW KR
Sbjct:    1 MSFLAWKTINWSLVNSRIQRYQTRIFKASKENNIYKIRCIQKRLLNSLDAKLIAVRQVTTLNKSKIIPGVDKQEFITNLEKEKLVRKLRLDGKALPIQSVSIYKVGKAKKYPFSMPIAKDRAKETLCLLALEPEWEAKFERNSYGFRPGRCCHDAMKAILLTIRNHSRENHYRKYILDADITKCFDQIDYEYVVEKLNTLPEIKNQVKAWLNVGVLENFL--DKNKETNRIENSMTTLQGGIISPLVANIVLHGLEYHMKKWIYTKPSFVKISLYSKSAKCKSLSVINYEDDFVFIHQDKTIIKEAKKEISSWLLNGPGLKLNEEKTSIRNSNEGFNFLGFTFIIIRRTNKTRAKIYPSSKFQELLILKVRNLIQRNRNISAYNLILVLQPIIIGWANYFKYSRCKKCFQKLTHLIVQQLRSWLFRRDTRNGRKEVKQRYFPTGKKYYFDGRNHKDNWILNGKTKDKKDNIKKNWLPHLTWVKDEKWIKVKSNKSTFDGDNLYWSKR 505          
BLAST of mRNA_L-elsbetiae_contig10.30.1 vs. uniprot
Match: A0A1D8D957_9STRA (Putative reverse transcriptase n=1 Tax=Toxarium undulatum TaxID=210620 RepID=A0A1D8D957_9STRA)

HSP 1 Score: 565 bits (1455), Expect = 6.170e-196
Identity = 294/509 (57.76%), Postives = 370/509 (72.69%), Query Frame = 0
Query:    1 MSINAWKDIDWSLIDKRIFRYQTRIYKATRDRNISKVKCLQKRLLKSLDAKLNAVRRVTTLNKGRKISGSDRQIFVTDKEKIKLVKRLRLNGKALSIYRVYIPERGKLENPPLDIPTLEDRAKQALCKLALEPEWEARFEANSYGFRPGRSYQDAMESILSSLQNSSSDKSYHKYVLGANISKCFDRIDHTYLLKKLDTLPEMETQVKAWLKAGILDELVIGK--RFEGTITLKKQEEIIKGGILSTLLSNIALHGMEDYMTNWICTQPSFAKTNIYNKDAKRKSLVVIRYADDFVIIHKNETIIRQAKEEISNWLWKGPRLVLNEEKTFIRDTNNGFNFLGFTCITITRGSTLRAKIYPSKLSQAQLLLKVRNTIINNRSASNYILISLLFPIIMSWANYFCFFECSQCFTKLSHLISQKLRAWVFRRDTRNGRKVVKERNFPNDKCYHFNGIKHIDNWVLNGKMIIQLGETKEIWLPHIRWIQSKKWVKIKGDYSPYNGDNLYWEKR 507
            MS  AW  I+WS ++ R+ RYQTRIYKA++D N  KV+CLQKRLL S DAK+ AVR+ TTL K +K  G D+ IFVTD +K KLV++L+L+ K + I ++Y+ +  + E     IP ++DRAKQALC L LEPEWEARFE NSYGFRPGRS  DA+ESI  +LQ +S +  YH ++L  NI+KC  +IDH YL+ KL T+PE++ QVK WLK+ I DE  + K  R    I    QEEII     S LL NIALHGME+YM NWI T+P   KT   N +AK  S+ +IRYA+DFVIIHK ++IIR+AK+EI+ WLW GPRL L+E +T I D+N+GF+FLGF+ ITI RG + R KIYP + SQA LL+ VRN +  NRS S Y LI  L PII+ WANYF +  C + F KL++LI QKLRAWVFRRDTRNGR  +K+R FP+ K Y +NGI+H DNW+LNGK I + GE KEIWLP+I W++SKKWVKIK D SPY+GDN+YW KR
Sbjct:    1 MSNIAWNTINWSQVEFRVKRYQTRIYKASKDNNKRKVRCLQKRLLNSFDAKMMAVRQATTLTKSKKTLGVDKNIFVTDVQKGKLVQKLKLDRKTIPIKQLYLNKPERKEKRLQSIPIIKDRAKQALCLLILEPEWEARFEPNSYGFRPGRSGHDAIESIFVNLQKNSGNYDYHNHILYININKCLGKIDHNYLITKLGTIPEIKNQVKTWLKSNIFDEFQVSKIDRLLKNIENTAQEEII-----SPLLLNIALHGMENYMKNWIITKPLLPKTKKQNNNAK--SIAIIRYANDFVIIHKKQSIIREAKDEIAKWLWDGPRLKLSETETTIVDSNHGFDFLGFSIITIARGKS-RVKIYPCRKSQAILLINVRNILQKNRSTSTYNLILKLRPIIIGWANYFKYSHCQKVFHKLTYLIHQKLRAWVFRRDTRNGRIQIKQRYFPSGKTYTYNGIQHQDNWILNGKQIGKNGEIKEIWLPNIAWVKSKKWVKIKADKSPYDGDNVYWAKR 501          
BLAST of mRNA_L-elsbetiae_contig10.30.1 vs. uniprot
Match: A0A0S2LPX6_CHLAP (Putative reverse transcriptase, intron maturase and HNH endonuclease n=1 Tax=Chlamydomonas applanata TaxID=35704 RepID=A0A0S2LPX6_CHLAP)

HSP 1 Score: 477 bits (1228), Expect = 5.920e-160
Identity = 259/508 (50.98%), Postives = 342/508 (67.32%), Query Frame = 0
Query:    5 AWKDIDWSLIDKRIFRYQTRIYKATRDRNISKVKCLQKRLLKSLDAKLNAVRRVTTLNKGRKISGSDRQIFVTDKEKIKLVKRLRLNGKALSIYRVYIPERGKLENPPLDIPTLEDRAKQALCKLALEPEWEARFEANSYGFRPGRSYQDAMESILSSLQNSSSDKSYHKYVLGANISKCFDRIDHTYLLKKLDTLPEMETQVKAWLKAGILDELVIGKRFEGTITLKKQEEIIKGGILSTLLSNIALHGMEDYMTNWICTQPSFAKTNIYNKDAKRKSLVVIRYADDFVIIHKNETIIRQAKEEISNWLWKGPRLVLNEEKTFIRDTNNGFNFLGFTCITITRGSTLRAKIYPSKLSQAQLLLKVRNTIINNRSASNYILISLLFPIIMSWANYFCFFECSQCFTKLSHLISQKLRAWVFRRDTRNGRKVVKERNFPNDKCYHFNGIKHIDNWVLNGKMIIQLGETKEIWLPHIRWIQSKKWVKIKGDYSPYNGDNLYWEKRTKELE 512
            AWK I+W  +  R+ R Q RIYKA R  NI +V  LQKRL+ S+DAKL AV+ VTTLN+G+K +G DR   +T+K+KI L + LRL+GKA SI RV+IP+ GK E  PL IPT++DRAKQAL KLALEPEWEA FE NSYGFRP RS  DA+E+I  +L++        K++  A+I KCFDRIDH  L+ KL+T PEME Q++AWLKA I++      +     T+   +    GGI+S LL+NIALHGME+++ N++   P+  K       AK+K+L ++RYADDFV+IH+N  I+   KEE   WL     L LNEEK+ IRD   GF FLGF  I + +    + KIYP K  Q  LL KV+  +  N+++S Y LI  L PII+ WANY+ F EC + F +L+  I + +RAWVFRRDTRNGRKV+KER FP+ + Y F G+KH DNW+L GK     G+ +E +LPHI W+ S+K+VK+K D SPYNGD +YW  R ++ +
Sbjct:   56 AWKSINWLKVTDRVRRIQRRIYKAKRKGNIDQVHWLQKRLINSIDAKLMAVQLVTTLNRGKKTAGVDRIRGLTEKQKIALARSLRLDGKASSIRRVWIPKPGKTEKRPLGIPTIKDRAKQALAKLALEPEWEAVFEPNSYGFRPARSAHDAIEAIFLALRHG-----VPKWIFDADIRKCFDRIDHDALISKLNTFPEMEKQIRAWLKADIMEGYANNPKDIQQSTMGTPQ----GGIVSPLLANIALHGMENHLKNFVTRLPTPRKGANRGSIAKQKALTLVRYADDFVLIHENLAILEACKEEAKRWL-TDIGLELNEEKSAIRDGRLGFKFLGFQIIQVRKNKEYKVKIYPHKDKQKALLDKVKTVVQLNKASSAYKLIRTLRPIIIGWANYYKFCECKETFHRLNDSIFRCVRAWVFRRDTRNGRKVIKERYFPSGRSYIFQGVKHQDNWILVGKQRGPNGQIQETFLPHIVWVASEKFVKVKEDMSPYNGDYMYWGLRKEKYQ 553          
BLAST of mRNA_L-elsbetiae_contig10.30.1 vs. uniprot
Match: A0A1B2RYR6_9CHLO (Putative reverse transcriptase, intron maturase and HNH endonuclease n=1 Tax=Rhexinema sarcinoideum TaxID=43261 RepID=A0A1B2RYR6_9CHLO)

HSP 1 Score: 471 bits (1212), Expect = 6.900e-158
Identity = 243/521 (46.64%), Postives = 349/521 (66.99%), Query Frame = 0
Query:    5 AWKDIDWSLIDKRIFRYQTRIYKATRDRNISKVKCLQKRLLKSLDAKLNAVRRVTTLNKGRKISGSDRQIFVTDKEKIKLVKRLRLNGKALSIYRVYIPERGKLENP-----------------PLDIPTLEDRAKQALCKLALEPEWEARFEANSYGFRPGRSYQDAMESILSSLQNSSSDKSYHKYVLGANISKCFDRIDHTYLLKKLDTLPEMETQVKAWLKAGILDELVIGKRFEGTITLKKQEEIIKGGILSTLLSNIALHGMEDYMTNWICTQPSFAKTNIYNKDAKRKSLVVIRYADDFVIIHKNETIIRQAKEEISNWLWKGPRLVLNEEKTFIRDTNNGFNFLGFTCITITRGSTLRAKIYPSKLSQAQLLLKVRNTIINNRSASNYILISLLFPIIMSWANYFCFFECSQCFTKLSHLISQKLRAWVFRRDTRNGRKVVKERNFPNDKCYHFNGIKHIDNWVLNGKMIIQLGETKEIWLPHIRWIQSKKWVKIKGDYSPYNGDNLYWEKRT 508
            AWK I+W+L+ KR+ RYQ RI+KA++  N  KV+ +QK ++ SLDAKL AVR+VTT NKG+K  G D+++++T  EKI+LVK L+++ KA  I RV+IP+ GK E                   PL IP + DRAKQ L   ALEPEWEA+FE NSYGFRPGRS  DA+E+I ++L ++ S+ +Y KYVL A++  CFD I+H YLL KL+TLPE   Q+KAWLKAGIL+  +   +++  +    Q    + G LS+ L+N+ALHGME  +  WI T+P F+K    N  AK++++ VIRYADDF+++H N+ ++ +AK+ ++ W      L  N+EKT IR +N GF FLG + I I R    R KIYPS+ SQ +LL K+R  I +N++ S Y LI  L P+   WAN+F + ECS+ F ++ +LI  KLRAWVFRRD RNG+ ++K + FP    Y +N ++H++ W+LNG  +   G+ + ++L  + W +S+K++KI+G  SPY+G++LYW KRT
Sbjct:    6 AWKHINWTLVQKRVNRYQRRIFKASQSHNKRKVRFVQKLIVNSLDAKLLAVRKVTTDNKGKKTPGVDKKLYLTSNEKIQLVKSLKIDAKASPIRRVFIPKPGKTEKTLRLCFGTEKQSLKQSCGPLGIPIILDRAKQTLMLFALEPEWEAKFEPNSYGFRPGRSCHDAVEAIFNALHSTKSEYAY-KYVLNADLKGCFDNINHQYLLDKLNTLPEFTAQIKAWLKAGILEFYLKSSQYD--LMPSNQIGTPQSGTLSSFLANVALHGMEHILKQWILTKPHFSKKK--NTLAKQQAITVIRYADDFIVMHVNQQVVIEAKKILTEWFANTSGLKFNQEKTSIRQSNKGFQFLGHSFINIQRHGKQRLKIYPSRKSQKKLLTKIRAIIQHNKATSTYELIKKLRPVTQGWANFFKYSECSKVFNRIDNLIFNKLRAWVFRRDRRNGKLIIKTKYFPEPGTYTYNDVQHVNKWILNGTAMTTAGKKETLFLAPLSWTKSEKFIKIQGTASPYDGNDLYWMKRT 521          
BLAST of mRNA_L-elsbetiae_contig10.30.1 vs. uniprot
Match: A0A1Y9TMF9_9RHOD (Putative reverse transcriptase/maturase n=1 Tax=Bulboplastis apyrenoidosa TaxID=1070855 RepID=A0A1Y9TMF9_9RHOD)

HSP 1 Score: 466 bits (1200), Expect = 2.270e-156
Identity = 243/504 (48.21%), Postives = 344/504 (68.25%), Query Frame = 0
Query:    5 AWKDIDWSLIDKRIFRYQTRIYKATRDRNISKVKCLQKRLLKSLDAKLNAVRRVTTLNKGRKISGSDRQIFVTDKEKIKLVKRLRLNGKALSIYRVYIPERGKLENPPLDIPTLEDRAKQALCKLALEPEWEARFEANSYGFRPGRSYQDAMESILSSLQNSSSDKSYHKYVLGANISKCFDRIDHTYLLKKLDTLPEMETQVKAWLKAGILDELVIGKRFEGTITLKKQEEIIKGGILSTLLSNIALHGMEDYMTNWICTQPSFAKTNIYNKDAKRKSLVVIRYADDFVIIHKNETIIRQAKEEISNWLWKGPRLVLNEEKTFIRDTNNGFNFLGFTCITITRGSTLRAKIYPSKLSQAQLLLKVRNTIINNRSASNYILISLLFPIIMSWANYFCFFECSQCFTKLSHLISQKLRAWVFRRDTRNGRKVVKERNFPNDKCYHFNGIKHIDNWVLNGKMIIQLGETKEIWLPHIRWIQSKKWVKIKGDYSPYNGDNLYWEKRT 508
            AW+ +DW+ +  R+ RYQ RIYKA+ +   +KV+ LQK+LL SLD+KL AV  VTT NKG+K  G D+  ++T+K K+ LV+ LRL+GK +    ++IP+ G+ E   L IP ++DRAKQ L  LALEPEWEARFE+NSYGFRPG+S  DA+E+IL +L N S  K   KY+L  ++SKCF  ++H YL+KK+D+LPE+  Q+++WLK G++ +  I K  E  +  K  +E  KG IL   L N+ALHGM++++ +WI      +      K  K+KSL VIRY D+ VIIH ++  +  AKEEIS WL +   L     K  I  +  GFNFLGF+ I + + S LR K YPS+ +Q ++L KVR+ I  NR+ S Y+LI+ L P+I+ WANY+ + EC + F KL+HLI +KL++WVFRRDTRNGR+ VKE+ FP+ + Y F+G+KH DNWV  G+   +  E ++ WLPH+ W++S+KWVK+KG  S Y+G+N YW +R+
Sbjct:    6 AWEQVDWAAVRYRVSRYQYRIYKASLNSKKAKVRFLQKQLLSSLDSKLYAVFSVTTWNKGKKNPGVDKNFYMTNKHKMSLVQDLRLDGKTVPFKSIWIPKEGEKEKSSLCIPIIKDRAKQTLFLLALEPEWEARFESNSYGFRPGKSCHDAIEAILFALGNKSK-KVESKYILDVDLSKCFSSLNHEYLIKKIDSLPEVNKQLESWLKYGMIKDCEI-KLCESIVFNKLFQE--KGRILYAFLVNVALHGMQNHLKDWINNYSILSSYANKGKKEKQKSLSVIRYTDNCVIIHPSKKTLILAKEEISKWLKETSGLEFKNTKNSISLSAEGFNFLGFSFIMVNQNSILRYKAYPSREAQKKILYKVRDIIQTNRNVSAYVLITKLKPVIIGWANYYRYCECKETFAKLTHLIFKKLKSWVFRRDTRNGRQKVKEKYFPSGQTYTFDGVKHEDNWVFYGECRDKRNEIRKAWLPHLVWVKSRKWVKVKGKASVYDGNNAYWAQRS 505          
BLAST of mRNA_L-elsbetiae_contig10.30.1 vs. uniprot
Match: A0A0S2IBK1_9CHLO (Putative reverse transcriptase n=1 Tax=Chlamydomonas nivalis TaxID=47906 RepID=A0A0S2IBK1_9CHLO)

HSP 1 Score: 461 bits (1186), Expect = 2.940e-154
Identity = 248/504 (49.21%), Postives = 336/504 (66.67%), Query Frame = 0
Query:    5 AWKDIDWSLIDKRIFRYQTRIYKATRDRNISKVKCLQKRLLKSLDAKLNAVRRVTTLNKGRKISGSDRQIFVTDKEKIKLVKRLRLNGKALSIYRVYIPERGKLENPPLDIPTLEDRAKQALCKLALEPEWEARFEANSYGFRPGRSYQDAMESILSSLQNSSSDKSYHKYVLGANISKCFDRIDHTYLLKKLDTLPEMETQVKAWLKAGILDELVIGKRFEGTITLKKQEEIIKGGILSTLLSNIALHGMEDYMTNWICTQPSFAKTNIYNKDAKRKSLVVIRYADDFVIIHKNETIIRQAKEEISNWLWKGPRLVLNEEKTFIRDTNNGFNFLGFTCITITRGSTLRAKIYPSKLSQAQLLLKVRNTIINNRSASNYILISLLFPIIMSWANYFCFFECSQCFTKLSHLISQKLRAWVFRRDTRNGRKVVKERNFPNDKCYHFNGIKHIDNWVLNGKMIIQLGETKEIWLPHIRWIQSKKWVKIKGDYSPYNGDNLYWEKRT 508
            AWK+I W  +D+RI+R Q+RIYKA +  NI K   LQ +L+ S DAKL+AVR VTTLN+G+  +G D    + DKEK+ L + L LNGKA  I RV+IP+ GK E  PL IPT++DRAKQAL KLALEPEWEA FE NSYGFRPGRS  DA+E+I S L +        K +  A+I KCFDRI+H  L+ KL T P M+ Q++AWLKAG+++      + + T T   +    +GG++S LL+NIA+HG+E+++ +++       + N + K+ KR++L VIRYADDFVIIH+N+ I+     E  NWL K   L ++EEK+ IRD+  G  FLGF    + +    + KI PSK +  + L K++N I  ++S S Y LI  L PI + WANYF + EC + F KL+  I +KLRAWVFRRDTRNGR+ VKE+ FP++K Y ++G KH +NW+LNGK   + G+ KE  LP I W++S K VKI G  SP++GDN+YW  R 
Sbjct:    9 AWKEICWQGVDERIYRIQSRIYKARKSGNIQKTHWLQNKLIHSADAKLSAVRLVTTLNRGKNTAGIDGARKLNDKEKMILARNLSLNGKAQPIRRVWIPKPGKTEKRPLGIPTVQDRAKQALAKLALEPEWEAIFEPNSYGFRPGRSTHDAIEAIFSCLHHGRP-----KLIYDADIRKCFDRINHDALINKLKTFPLMKNQIQAWLKAGVMESFAKRNKEQTTPT---EMGTPQGGVISPLLANIAMHGLEEHLKDFVSNLKINPRPNAFGKEKKRQALGVIRYADDFVIIHENKEIMPLCIAEAKNWLIK-MGLEISEEKSSIRDSRQGIKFLGFKITLVRKAKRYKVKIVPSKDNTKRFLEKIKNVIQKSKSCSAYQLIERLRPITLGWANYFRYCECGEVFNKLNDKIFRKLRAWVFRRDTRNGRRFVKEKYFPSNKTYTYDGRKHQNNWILNGKQKDKGGQIKENILPSISWVKSCKHVKILGSRSPFDGDNVYWAIRN 503          
BLAST of mRNA_L-elsbetiae_contig10.30.1 vs. uniprot
Match: A0A0B6VHN7_9CHLO (Putative reverse transcriptase and intron maturase n=1 Tax=Ulva adhaerens TaxID=1434984 RepID=A0A0B6VHN7_9CHLO)

HSP 1 Score: 461 bits (1187), Expect = 2.960e-154
Identity = 246/507 (48.52%), Postives = 339/507 (66.86%), Query Frame = 0
Query:    5 AWKDIDWSLIDKRIFRYQTRIYKATRDRNISKVKCLQKRLLKSLDAKLNAVRRVTTLNKGRKISGSDRQIFVTDKEKIKLVKRLRLNGKALSIYRVYIPERGKLENPPLDIPTLEDRAKQALCKLALEPEWEARFEANSYGFRPGRSYQDAMESILSSLQNSSSDKSYHKYVLGANISKCFDRIDHTYLLKKLDTLPEMETQVKAWLKAGILDELVIGKRFEG---TITLKKQEEIIKGGILSTLLSNIALHGMEDYMTNWICTQPSFAKTNIYNKDAKRKSLVVIRYADDFVIIHKNETIIRQAKEEISNWLWKGPRLVLNEEKTFIRDTNNGFNFLGFTCITITRGSTLRAKIYPSKLSQAQLLLKVRNTIINNRSASNYILISLLFPIIMSWANYFCFFECSQCFTKLSHLISQKLRAWVFRRDTRNGRKVVKERNFPNDKCYHFNGIKHIDNWVLNGKMIIQLGETKEIWLPHIRWIQSKKWVKIKGDYSPYNGDNLYWEKRT 508
             W+DI W  +++RI RYQ RIYKA+ + N   V+ LQK ++ SLD+KL +VRRVT+ NKG+K  G D +++ T  +KI LV++LR++GKA  + RV+I  +   E  PL IPT+ DRAKQ+L  LALEPEWE+RFE N+YGFRPGR  QDA+E+I  +L N++    Y KYVL A+I  CFD I+H Y+L KLDTLPE+E Q+KAWL+AGI++   I   F      IT   Q     GGI+S  L+NIAL G+E  + NW+C   +  K  +  +D K KS+ +IRYADDFV++H ++ II ++K  I NWL   P+L LN  KT I  ++ GFNFLGF  I+I R +  + KIYP+K S   +   + N   NNRS S+Y LI  L PII+ WANY+ F EC + F K+ ++I Q LR+WVFRRD  +GR  +KE+ FP+ K Y F+   + DNW+L GK I +  + KE WLP I+W++ +K++K+KG  S YNGD++YW  +T
Sbjct:    4 TWEDIQWHKVEQRILRYQERIYKASLNNNKKLVRNLQKVIINSLDSKLLSVRRVTSYNKGKKTPGIDGKLYTTSDDKILLVEKLRIDGKADFVKRVFI-SKSDTEKRPLGIPTVMDRAKQSLLLLALEPEWESRFEPNNYGFRPGRRCQDAVEAIFLNLANTNKQSVYKKYVLDADIKGCFDNINHDYILAKLDTLPEIEIQIKAWLEAGIMESPYINPEFISMTPNITGTPQ-----GGIISPFLANIALDGIEYDLKNWVCEHTT--KKGMSRRD-KMKSISLIRYADDFVVLHHSKEIIEKSKLFIENWLNTKPKLKLNTTKTKIICSSEGFNFLGFRFISIQRNNQTKIKIYPTKSSIKSITTTIGNITRNNRSISSYDLIETLRPIILGWANYYKFCECKEIFHKVDNIIWQILRSWVFRRDRLHGRTTIKEKYFPSGKSYRFDNRTYFDNWILTGKKIDKGNKIKENWLPRIQWVKKQKYIKVKGKASVYNGDHIYWTIKT 501          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A514CPJ3_9STRA2.490e-25772.24Reverse transcriptase domain-containing protein n=... [more]
UPI001EDDE7DD2.750e-22463.04hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A8F8X858_9STRA1.570e-21059.84Putative reverse transcriptase n=1 Tax=Climaconeis... [more]
A0A8F8SPV3_9STRA1.520e-19856.21Putative reverse transcriptase n=1 Tax=Climaconeis... [more]
A0A1D8D957_9STRA6.170e-19657.76Putative reverse transcriptase n=1 Tax=Toxarium un... [more]
A0A0S2LPX6_CHLAP5.920e-16050.98Putative reverse transcriptase, intron maturase an... [more]
A0A1B2RYR6_9CHLO6.900e-15846.64Putative reverse transcriptase, intron maturase an... [more]
A0A1Y9TMF9_9RHOD2.270e-15648.21Putative reverse transcriptase/maturase n=1 Tax=Bu... [more]
A0A0S2IBK1_9CHLO2.940e-15449.21Putative reverse transcriptase n=1 Tax=Chlamydomon... [more]
A0A0B6VHN7_9CHLO2.960e-15448.52Putative reverse transcriptase and intron maturase... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025960Reverse transcriptase, N-terminal domainPFAMPF13655RVT_Ncoord: 6..88
e-value: 4.2E-24
score: 84.6
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 113..342
e-value: 3.4E-26
score: 92.1
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..343
score: 14.328
IPR013597Group II intron, maturase-specificPFAMPF08388GIIMcoord: 366..439
e-value: 2.5E-12
score: 46.7
NoneNo IPR availablePANTHERPTHR34047FAMILY NOT NAMEDcoord: 5..510
NoneNo IPR availablePANTHERPTHR34047:SF2coord: 5..510
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 404..518
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..382
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 383..403
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 112..428

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10contigL-elsbetiae_contig10:51040..52596 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10.30.1mRNA_L-elsbetiae_contig10.30.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10 51040..52760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10.30.1 ID=prot_L-elsbetiae_contig10.30.1|Name=mRNA_L-elsbetiae_contig10.30.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=519bp
MSINAWKDIDWSLIDKRIFRYQTRIYKATRDRNISKVKCLQKRLLKSLDA
KLNAVRRVTTLNKGRKISGSDRQIFVTDKEKIKLVKRLRLNGKALSIYRV
YIPERGKLENPPLDIPTLEDRAKQALCKLALEPEWEARFEANSYGFRPGR
SYQDAMESILSSLQNSSSDKSYHKYVLGANISKCFDRIDHTYLLKKLDTL
PEMETQVKAWLKAGILDELVIGKRFEGTITLKKQEEIIKGGILSTLLSNI
ALHGMEDYMTNWICTQPSFAKTNIYNKDAKRKSLVVIRYADDFVIIHKNE
TIIRQAKEEISNWLWKGPRLVLNEEKTFIRDTNNGFNFLGFTCITITRGS
TLRAKIYPSKLSQAQLLLKVRNTIINNRSASNYILISLLFPIIMSWANYF
CFFECSQCFTKLSHLISQKLRAWVFRRDTRNGRKVVKERNFPNDKCYHFN
GIKHIDNWVLNGKMIIQLGETKEIWLPHIRWIQSKKWVKIKGDYSPYNGD
NLYWEKRTKELEIFDNEN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025960RVT_N
IPR000477RT_dom
IPR013597Mat_intron_G2